Array 1 92466-89814 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGMA010000001.1 Vibrio harveyi strain 2013V-1036 Contig1_2013V-1036, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 92465 29 100.0 32 ............................. CGTCAAATACTGGCGCAATGCTTCAAAACACG 92404 29 100.0 32 ............................. TACTCATCTTGTGTGATGGCTTGAATGCCCGT 92343 29 100.0 32 ............................. TCGCCAAATTCTGTCTTCCAGTCAATGCCCTC 92282 29 100.0 32 ............................. GCTCTGGAGCACGAATTCAGGACTCGGATGAG 92221 29 100.0 32 ............................. AGAACCCTCCGATATAAAGACCCAATGCGAGC 92160 29 100.0 32 ............................. TGGACGAGCTCTACACGGCGCTGCGTGTCGTG 92099 29 100.0 32 ............................. TCCAGAGTGCCTTTACTTGGGATAGGTGGGAT 92038 29 100.0 32 ............................. CGATGCTACTAATATTATTCGTGGTGCTCTTG 91977 29 100.0 32 ............................. CATCTGCTAAATTAATCACGGAATGGCGTCAA 91916 29 96.6 32 ............................T TCAGCATATCCGTCGATTTTTTGTTGAGAAAC 91855 29 100.0 32 ............................. TCTGAATCCGTTCCGTAATCGTCCGCCCACTG 91794 29 100.0 32 ............................. TTTCCAGTCAGGAGTGTCATTTGTTTCAGTTG 91733 29 96.6 32 .............T............... TCGTCCACGGCAGAACCTTTCGCCGTTCTCGG 91672 29 100.0 32 ............................. TTATCCACAAAATCTGTGGACATCAGGGAGGC 91611 29 100.0 32 ............................. ATGAAGTCGTATTTGTACGTCTAACCGGTGGT 91550 29 100.0 32 ............................. CGTTTGGGCGATATCGAGCGTGATTCTGTCAT 91489 29 100.0 32 ............................. AGACCCGTTTTGGTACTCAAATGTTTTTGCAA 91428 29 100.0 32 ............................. GGTTTGAAAGTCATCTGTATCGATAAGTTTTA 91367 29 100.0 32 ............................. GAGTATTTCAGATGTCAAACCAGCAGAAATCC 91306 29 100.0 32 ............................. TTAGTTGAGATTGTTTGTGATGAGCCTATGTC 91245 29 100.0 32 ............................. TCATTTGAGGCTTCGACGGCGGGTGTAACTTC 91184 29 100.0 32 ............................. GTGTAGCTTATGTGGGTTGATACTGCTGTCGA 91123 29 100.0 32 ............................. TTGCCGTCGTTCGGCAAGAAGACCGGAGGTGT 91062 29 100.0 32 ............................. GAGCACGACCAAGAGCAGCGTTTACACCCCAA 91001 29 100.0 32 ............................. ATTAAAAACGACACTGTTTATATTGAAGAGAG 90940 29 100.0 32 ............................. CAATCCATAACCTTCAACATTTCCAAGAATGT 90879 29 96.6 32 ..............G.............. CCGACCTCTATCGATAACCGGCTCCGTACTGC 90818 29 100.0 32 ............................. CTTTCTTTCCCCACCAGCGCCAAGCTGCGCCG 90757 29 100.0 32 ............................. GTGTCATGCCAGATTAATCTGCAGGTGTAGTC 90696 29 100.0 32 ............................. CGTTACATATGGCTAAGGAACGCGGTTACATC 90635 29 100.0 32 ............................. GTGGCAAAGCGCTTTGGAAAAAGATCGCTGCG 90574 29 96.6 32 ............................A AGATCCGTTGCATTCACTCTTAAATTTATAGT 90513 29 100.0 32 ............................. GTTACACACAGGACGCATTGAATATTGTAATG 90452 29 100.0 32 ............................. CTCAGACCGCGACAAAGGTTGACTACAGCTTT 90391 29 100.0 32 ............................. ATTCTTCGTCAGCGATGAGAAGACCGCGACGC 90330 29 100.0 32 ............................. GCGAAATCTGAATACATGAAAGGACTACAGGA 90269 29 100.0 32 ............................. AATGTCGCGCCGGCTTTCATGTTATCTACATA 90208 29 100.0 32 ............................. CTTGGCTTTGCCACAATGGGAGGTATTAACCC 90147 29 100.0 32 ............................. AGCCTCGTTTTGGGGCTCTTATTTTCTAGGAG 90086 29 100.0 32 ............................. TAACATCGTTACTATCAACTGACTTTGTTGAA 90025 29 100.0 32 ............................. CAAAAGGCGAAGAGTGGCTACCTACGTGGGCT 89964 29 100.0 32 ............................. AAAACGGCAACCAAATTGAACCATGGCATCAG 89903 29 100.0 32 ............................. GCTAAAGCGGGCATGAGTGGCGATACCAACGA 89842 29 93.1 0 .........................G..A | ========== ====== ====== ====== ============================= ================================ ================== 44 29 99.5 32 GTGTTCTCCGTACCCACGGAGATGAACCG # Left flank : ACTAATTGAAGAAGTATTAAGCGCTGGCGATATTACGCCGCCAGAGCCTTATGTGGATGCCCAACCTCCGGCGATACCTGTGCCTATCGCGGTTGGGGATTTTGGTCACCGGAGTAAATAATGTAATGAGTATGTTAGTGATCGTGACAGAAGCGGTTCCCCCTCGATTGCGAGGAAGGCTTGCTGTGTGGTTATTGGAGATCAGAGCTGGCGTATATGTGGGTGACGTATCATGTAAAATCCGTGAAATGATTTGGGAACAAATTAATGTGCTAGCCGATGACGGCAATGTTGTGATGGCGTGGGGGACAAATACAGAATCGGGATTTGATTTTCAGACGTACGGGAAAAATCGCCGAGAACCTATCGATTTAGATGGTTTAAGGTTGGTGAAATTTCAACCACAATAATAATTGATTGGTGTCGGTTAGCTCTTTAATAATGTTGGTAGAATAAAGCATGTTGATTTTTTTATTATAAATCAATAGTATATTTTTAGA # Right flank : TGAATTCATTAGTGAATTTACATTTAATATTATTCAAATTTATTATTTTATTGCAGCTTTATTCAAGATAATCAAATGAAATAAACTGAAATGTCTTGATTTTTAGGTAGATGTATTTTCTTATTTAAATGAAAATTTATTTATATTATGAATCTCGATTCAGGTCACTTTAACTTTGAATTCTCGCATTGGAACCGGTTAACTATTTCAGGTTCGACATACTCCTTCTGAGAAATTCTTCTTTGGATATGGTTATTTCAAAAGATTCTTAGCGTGGTGAAAAATTCGTACTGTTATGACATATCAATGGTAATCAAGAAGGGCGGTTCTTTAGCTGAATTAGAGTTATTTTTATTAATAGCAACCTACTTTTTGAAAGGTGTTTCTTTGGAAGAGCGTACTTCATCAACTGAATGTTCGATAATGTCTTTAGTAGTTTCAAATAGCAATTCTCCAAGTACTGAGCATTTTAGTAAACTCGAGCTTTGATATCGACATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCTCCGTACCCACGGAGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.60,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //