Array 1 1-692 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMPS01000002.1 Siphonobacter sp. BAB-5385 NODE_4_length_694_cov_50.7867, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1 30 100.0 37 .............................. TCGGGTAAGGACTGAAAAAACGAATCTGTCCAGCCCA 68 30 100.0 36 .............................. AACAACTTACCGAAGCCCTCCGTATTTTTCATAGCT 134 30 100.0 36 .............................. GAAGATTGATATCATACCCTTTCCTGCCTGGGACCC 200 30 100.0 36 .............................. CGGTGTCAATTCGGTTAAAAACTCAGTTTGAAAATT 266 30 100.0 36 .............................. CGAAGAAAGATCAGGCTAAAATTATTTTCGATGAGG 332 30 100.0 37 .............................. TTCAATACTCGCTGCCAATTAGAACCGGTTTCGGTAA 399 30 100.0 38 .............................. TTGATAAAGTATGGAACCCGCTAAAACCCCAGAAAAGA 467 30 100.0 36 .............................. CTCCGTTCGGTCGCGGCTCTACGTTCCTTGCGGCTT 533 30 100.0 35 .............................. GTTCACGACCGGCATGGATCAGGCTACTCGGCAAC 598 30 100.0 35 .............................. GGCACCAGCTGCGATGTCAGCCACCGCCTGATAGC 663 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 11 30 100.0 37 GTCTTAATCGTACCTAGTTGGAATTGAAAT # Left flank : | # Right flank : AT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCGTACCTAGTTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-3.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 226080-226241 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMPS01000220.1 Siphonobacter sp. BAB-5385 NODE_630_length_226243_cov_34.4171, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 226080 30 100.0 36 .............................. ATGGTGGTGGTGTTCCTAGCTCATTTACGGGAACAG 226146 30 100.0 36 .............................. GGTACCGGACCATGATTTCCTGCGGAGCCGTGCCCA 226212 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 100.0 36 GTCTTAATCGTACCAGAGTGGAATTGAAAT # Left flank : TCTTCTTCAAAATCAATAAAAGATGTATGTCATTTTAGTGTACGATATGGGCCAGAAACGCGTGGGCAAGATGTTAAAACTTTGTCGGCGTTACTTGAACTGGATCCAGAACTCGGTTTTTGAGGGTGAGATGACCGACGTACAGTTGAGGGAGTTATTACACGAAGCGAAACGGATCATGAATGAAGAGGAAGACAGCCTAATTTTGTTCAAGAATCGCGACCAGAAGTGGCTGGATAAACAAATCGTCGGTATAGAACGGCAATCAACCGACGATTTTTTGTAAAACGGGATCGTCGATCGAATTACACAGCTCGGTGGCAGTTACCTGTTTCGTGCATTAATTACCCTTCTACTGACATAAAGCCGTGATTATCAGAAGTCGTCGATCGACGGGTATTTTCATACCATTGGAGATCGACGATTTTTTGATTTAATTTATAGCAAGTAAGTAGCGTGCAGAAGCCTGAAAAGGCCTTTTTTACACGTTTTTGATTGGG # Right flank : TT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCGTACCAGAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA //