Array 1 92995-96206 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJELD010000022.1 Acinetobacter baumannii strain MRSN717 MRSN717_contig00022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 92995 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 93055 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 93115 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 93175 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 93235 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 93295 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 93355 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 93415 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 93475 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 93535 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 93595 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 93655 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 93715 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 93775 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 93835 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 93895 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 93955 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 94015 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 94075 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 94135 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 94195 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 94255 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 94315 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 94375 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 94435 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 94495 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 94555 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 94615 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 94675 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 94735 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 94795 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 94855 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 94915 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 94975 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 95035 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 95095 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 95155 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 95216 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 95276 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 95336 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 95396 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 95456 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 95516 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 95576 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 95636 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 95697 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 95757 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 95817 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 95877 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 95937 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 95997 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 96057 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 96117 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 96177 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //