Array 1 38411-36467 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSXN01000010.1 Streptococcus suis strain WUSS330 Scaffold10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 38410 32 100.0 33 ................................ CGTAAGAAATAGAGCGAAATTCTCTAAAAGGAA 38345 32 100.0 35 ................................ TAACGATTTAGACGGTTCTTATTTTATCCGTACTA 38278 32 100.0 33 ................................ GTAAACCGATATTTTAACATGAGTTGTATCTAT 38213 32 100.0 32 ................................ AAAATTTACCGTTGTGTATAGCATTACCCATA 38149 32 100.0 35 ................................ AATTGTATTCACTATTTTACTAACACAGGACTACG 38082 32 100.0 35 ................................ TAATGTAGTTGAGAAAATAGTAAATAATCTAACTC 38015 32 100.0 34 ................................ ATTATCTGACGATGTAAAAAACGTTTGTGATAAA 37949 32 100.0 33 ................................ AAATAATGGTAGAGGTATTGGATTTGAAATTGT 37884 32 100.0 34 ................................ AAAATTAGTATTTGACGTAGGAAAAATATCTGAC 37818 32 100.0 35 ................................ CTGAAAGCATTCAAAAAAGAATTGACGCTGGAAAT 37751 32 100.0 33 ................................ TAAAGATACTTATGCTCACACTATTCACAATAT 37686 32 100.0 34 ................................ CTGATTCATTGCCTGCTTAGCGACAAGCCCCATC 37620 32 100.0 35 ................................ TTTACAAACTCCATCTGTTTTAGGAGGAAAATCCT 37553 32 100.0 33 ................................ ATCGTCTAAAGATGATTATGCTCAAACCATTTA 37488 32 100.0 34 ................................ TATGTAACTGCATATAACATTGATGTTAAAAAAA 37422 32 100.0 33 ................................ CTGAAAGTATACAGAAAAGATTAGACGCTGGAA 37357 32 100.0 34 ................................ AACTAAACTCCACTATACAATTTAAAACAACACT 37291 32 100.0 34 ................................ TAAAAAACTTACTAAACATGTCTACCCCACTTTC 37225 32 100.0 34 ................................ TGCAGCACCATTTGTCGCTTTAAGTACACCTCCT 37159 32 100.0 34 ................................ TTCTTTGTTGAAGTCTCCAACTCCCAGGATAAAA 37093 32 100.0 36 ................................ AAGGTATGGATCTAGTGCAGTCCCAAGGTCACTCGC 37025 32 100.0 34 ................................ CTATAATCCATAGAGTAAGTTACTTTGCCTCGCC 36959 32 100.0 34 ................................ CATTCGCTCGTCTGGCCATACAAACGTTGAACGC 36893 32 100.0 33 ................................ ATCTCAATGAATGATACTAAAATTCTTCCTTAT 36828 32 100.0 33 ................................ TACTGCATACTCCAATGCTGCCTTAATGTTTTC 36763 32 100.0 34 ................................ AAATGGACTAAAGCTGATTTTGATGCTCTTGTGG 36697 32 100.0 34 ................................ AGTAAGTTGATTCATATCAATTCTCCTTCTTCAA 36631 32 100.0 35 ................................ AAAGTAAGTATTTTACTATTAAAAATCAAAAAACG 36564 32 96.9 34 ..............................G. AACGTATCGACAGACTAGCTGCTCGGACGGACCG 36498 32 78.1 0 ....T......TG..TA.....A........C | ========== ====== ====== ====== ================================ ==================================== ================== 30 32 99.2 34 GTCGCACTCTTCACGAGTGCGTGGGTTGAAAT # Left flank : GCAAAGGCTATTCGAGGGGAGTTGGACAGTTATCCTCCGTTTATGATATAGGAGCTATATTATGATGGTATTAGTGACCTATGATGTCAATACAGAAACAGCAGCTGGACGAAAGCGGTTGAGAAAAGTAGCCAAGCTGTGCGTTGACTTTGGACAACGTGTGCAACATTCTGTTTTCGAATGCTCAGTCACCCCAGCAGAATTTGTTGAAGTGAAGAATAGATTATTGGAAATCATTGATAAGGAGCAGGATAGTATCCGCTTTTATATGCTAGGAAAAAACTGGCAAAATCGTGTGGAAACGATTGGACGAGATACTAGTTATGATCCTGATCAAGGAGTCCTTCTGTTATAGATTATCTCTGCGAATCGGACTTACTCATAAAAAGTAAGGAGATTCGCGTGAAAAACATATGAAAAACAGTGAAAATAGAGTGAATTTATGGTATATTCTATATCTGTAGAAACTTTATTTTTACAAAACAGTGTCAAATGGCACT # Right flank : TGTTTTTGCTTAACACAGTATATCTGGTGTGGACGTGTTCGAAGTTTCCCTCCTTTAACTCATCTCCCCACAATTTTCGAAAATTCTTGTTTTGTCTTGCTTGCTTCATGCTATAATAGTTGTATCAGTTTTTTAAAAGGAGACAAAAATGACAAACCTAAAAGAGCAGGTTGGGATTAAGGCGGCGGAATTTGTGACGGACGGGATGATTGTTGGGCTTGGAACTGGTTCGACGGCATACTATTTCGTGCAGGAGATTGGCCGCCGGGTTGCGGAAGAGGGCTTGCAGATCACAGGCGTAACGACCTCTCATGCTACGGCAGAACATGCTGCGTCCCTTGGGATTCCCCTAAAAAATATCGACGAAGTCGAATATGTGGACTTGACGGTGGATGGAGCAGATGAGGTTGATGGAGACTTCAATGGGATTAAAGGCGGTGGCGCAGCGCTTCTCATGGAGAAAGTGGTCGCAGTCAACAGTAAGGACTGCATCTGGATTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCACGAGTGCGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.40,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //