Array 1 6054-6260 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEVHG010000025.1 Zooshikella ganghwensis strain JC333 NODE_25_length_72302_cov_11.2357, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================= ================== 6054 27 100.0 33 ........................... GAATGCCGCAATTCAGCCTCTGTAATGGATGAA 6114 27 100.0 33 ........................... GAAACAAATCGAAATAATGACTACTTAACCCCC 6174 27 100.0 33 ........................... AAACTTGCTGATTTTAGTGATTATTTAGCTGAC 6234 27 92.6 0 G............G............. | ========== ====== ====== ====== =========================== ================================= ================== 4 27 98.2 33 AGTGAACCGCCATCTAGGCGGCTTAGA # Left flank : TCACCATTGCGGGTACTGATTACATGCCTCCCCAAGCCAGTGAACTACCTTGCCTGTTTGATAAAATGGTAGCGGGTGCCAAAGGGATAGACGACATCTATGACCAAGCGATTTTTGTATTCCTAACCATGGCGCGTCATCGGTTTTTCTATGGTGTGAATAAACGGATGGGACGGCTCATGATGAACGGTATATTACTCAATGCTGGTTACCCCGCAATTAACCTTCCAGTTAAACGAAAGCTGGAGTTTAACCAGTTAATGTTGGACTTTTATCAGTCTGGTGATCAAGGTCCTATGAATCAGTTTATGCGTTCTTGCCTGGATGATCGTTTGATTACTATTATGTGCGAGTAAAGCACAACGCATTAACCTTCTTTTTCGAGACAACTTTTACATACTTATAAATCAATGAGTTAGCGAATGGCCTAGAAAAGAAGTTAACGACCATCCATTACGCTACAGCTCTTTAACAATCAAGCTTTACAACGTTTTTCCTAT # Right flank : AATGTAACTTCATTTATTCCCAGAAATAGCCAGAGCCAGGATGCTAACTATAATGATGTTTGGACTTTTTGTTTAAGGTGGCAACATGAGCAATAAAAATAAACCTGCCCCATTTGAATTACAGAAAGAATATAAGCTGGACGATGCCCCAAAAGCAGTAACCACAACTCAGCGTTTTGATAGTGTTTGGGATGCATTGGATTTTCCCCCCATTGAAGCCAAAAAGCTCAAAATTAAATCCAAGCTGATGATCGCCATTAATCAGGAAATTAAAGATAAAAAATTAACCTCAAGTGATTTAAAAAAGCAGTTTAATATCAGTGATCAACTGGTAGCTTATTTAGTTAATGAAAAGTTCGATGCGCCCAGTATTGACCAATTATTGGAAGTCGCATGGTCACTTAAGCTTCCAGTAAAACTCAATATCACGCATGAATGAGCAAGCAAACACACTACAAAATACCGCTAGTACGGTCTTTCACTGGAAGTACGTGTCACGC # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGAACCGCCATCTAGGCGGCTTAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.30,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 13732-14298 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEVHG010000025.1 Zooshikella ganghwensis strain JC333 NODE_25_length_72302_cov_11.2357, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 13732 28 100.0 32 ............................ TTCGCTTTAGAGCGGGACCAGCAATCAAGCAA 13792 28 100.0 32 ............................ TTAACGCCGAGAGCGTGCCTGGCGAGCGTTTT 13852 28 100.0 32 ............................ CGAGGAAAAACAAAAATAGACGAGGATGTCAC 13912 28 100.0 32 ............................ AATAGCGCGGGCTAGAGTGCTTTTCCCGACCC 13972 28 100.0 32 ............................ TCAACAAGCATTCTACGGCAAGTACTGTCTGT 14032 28 100.0 32 ............................ TGAAGGTGGTTTTTTTGCACCGACTAGGGCGC 14092 28 96.4 32 ..........................G. TAAAAAGCTGACAAAAACTCCCATGTCCATAG 14152 28 96.4 32 ..........................G. ATATTACACAGCAAGCAGTGGTGCTGTAGCAC 14212 28 92.9 32 ............G.............G. TTACGTAACTTGTTGTATAGGGACATCTCTGT 14272 27 75.0 0 ............A..-.A..G..G.CT. | ========== ====== ====== ====== ============================ ================================ ================== 10 28 96.1 32 GTGAACCGCCATCTAGGCGGCTTAGAAA # Left flank : CGGGTATTTGCCAAACAGCTTGAGTCATTAGTGGCGTTAAACCTTGCCAATGATCCCGTAGGACCTTTATGTGACTTTAAAATGCCTGTTCCTGTCGCACAGGATTATGCTGGCCCTTGGTGTGTTTACCGTCGCTACCGTGTTCCCCCCAGAGGGAGAAAAAACCGTATCCAGCGATTAGCTTATGCATTTGAACACAACCTGCCCCGTTTTGTGTTACACAGTCAGTCCAATCAGCAAGTTTATTGCGTATCGGTTGAGAAAATGCCTGTAGAAGAGGGGCAGCTTGGTGAAATCAATACGTGTAACTTTGGGCTATCAACAACAGAGCAGGTGACTGTATTACCTGACCTTTGAGTCGAGCACATTGACCCTTTTTTGGAAGCCACTTTTACACGCTTATAAATCAATATGTTAGCGTAGGAGCGAGAAAAAGGGTCAACGATCATATATTACGCTACAGCTCTTTAACAATCAGACTTTACATAGTTTGATCTATA # Right flank : AGATTACGAACTTGAAGACATTCATAAAGTTATTCTCACTCTGGTCTTCCAAATATCTGTACAACTATACTAGAAATATCTTTAGCTACTTCTTTCTCATACCCTTCATCTTGCAATAATTCTGGCAGAATATACTCCGCTAAGTATTTAACAACATCTATGGATAGTGATCTCTTTCCCGTTTGCCAGTCTGAAAACCTGCTGGTTGTAAACTTTTTACCCAATGTATCATTCAGATGCTCTACTGCATCACTAACCTTTTTACCATCAAGTTCATAGAGTTGCCGCCAATAACGAACTATATCAACATCACTTCTTTCAATGTTAGATTTTTGATATCCTTTCTCTTTCGCAATATTTTTAACAGTATACATATGTAATTTATCGGGTTGTGGGTCAAACTCAATATAATCGCCAATATCAATCTCATACTGTCTTCTTAGTTTAACCGGAATAGTGATAAAACAACTGTCCCCATATTGCCGCACTTTCCCCTTAAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAACCGCCATCTAGGCGGCTTAGAAA # Alternate repeat : GTGAACCGCCATCTAGGCGGCTTAGAGA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAACCGCCACATAGGCGGCTTAGAAA with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //