Array 1 189831-192735 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP061840.1 Legionella pneumophila subsp. pneumophila strain AW-13-4 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 189831 37 100.0 34 ..................................... TAGATATAAAAAGATTAAATCTTCTAGCGCACAT 189902 37 100.0 34 ..................................... TCACTACTCCTGAAGGTTATAATTTTTGCTATAA 189973 37 100.0 36 ..................................... TTCGAATACAATCCTAGTGTCTCTGTGTGAATTAAG 190046 37 100.0 34 ..................................... CAGGCACTGGTTCACTAGACACTGTAACATCTAT 190117 37 100.0 34 ..................................... CTACCAGTTAATCGTAACTCAATCTCTTTTTCAA 190188 37 100.0 34 ..................................... ATAGAATACATAAGTGCAAATTATTAAATGTTAC 190259 37 100.0 34 ..................................... TGAATGTAGAAACCAGATGCCACGAATTATTAGA 190330 37 100.0 35 ..................................... TTTGTATAAACGTTCTGATATGACTTAGGTAATCT 190402 37 100.0 34 ..................................... CTAACCTGATTGCTCAACAAATAATGCTATTGGC 190473 37 100.0 34 ..................................... TCACTTTAGGCCAACGCCGATCCTCCGCTTCGAA 190544 37 100.0 35 ..................................... CTCACATCTTACCCTCAGGGCGGATATTGTGAATC 190616 37 100.0 33 ..................................... ATTAATAATATTTTAGAAGATTGGCACATAATA 190686 37 100.0 34 ..................................... TGACGCAAAGGATTTATTAAAAACGCCTTGTAAT 190757 37 100.0 31 ..................................... ATTTTACCTTTTAACACATATTGATAGGCGT 190825 37 100.0 36 ..................................... TCCATAACTGAAACGTCCTTATGCCTCAACATAATG 190898 37 100.0 36 ..................................... CTATTGCAAGCTAGTTTGATCGTGTTATTATAAGAA 190971 37 100.0 36 ..................................... TGACAAACGTTTGTTTTTTAGACACAACACTAAAAG 191044 37 100.0 35 ..................................... CCTGAAAACCCGCCACAACCCGCGCCAGACTTGAA 191116 37 100.0 34 ..................................... ACCAAGTCGAAACAACATACCGAGACCGTGTTGA 191187 37 100.0 35 ..................................... TACATTGTTACGTTCATTTCACTCAGTTTTTCATA 191259 37 100.0 34 ..................................... AGCAATAACCCAAAGTTTCGCGCGCGTGCGCGGG 191330 37 100.0 37 ..................................... TTATAACATCGGGATGGCGGTTTATTGGTTAAGTAAC 191404 37 100.0 34 ..................................... TTCTTTTTTCAGATTTCATTTCCTTTTCCTTGTG 191475 37 100.0 36 ..................................... TTTTTATCGTAAGCTTGATTAACTAGACATCTACTA 191548 37 100.0 33 ..................................... GTTTTAATTTAATCATTATTGCTTCCTTATTAA 191618 37 100.0 37 ..................................... TAAGATATTGGTCGATTGTTTGCAAGACGTCATCAAA 191692 37 100.0 34 ..................................... CTAAATCAGCAGTCATCAAAACCCATATGATTGT 191763 37 100.0 31 ..................................... TTCTCAGAATGGGAACGTTACACATCATATT 191831 37 100.0 34 ..................................... TTAAGTATACGTTTCTTTGGGCTATTAGTTCTAA 191902 37 100.0 36 ..................................... TTCTCATATTTTAAAACAATAGAGTAATTCATTTTA 191975 37 100.0 35 ..................................... AATCTTAATTTATGCGCCTTACCTTCTGCTTCATC 192047 37 100.0 36 ..................................... TATACTTAGACAATATCATCATTTCCTATGTTTCGA 192120 37 100.0 36 ..................................... GCTATTCCAGATAGGTAGTTGTTTAGAGCATTTTGT 192193 37 100.0 35 ..................................... TTCGATACTCCTTAGCGGTACTTGCTAAAGTAGTT 192265 37 100.0 35 ..................................... AAATAATTCTTGTGACTCACGTGCCGCCATTTGAA 192337 37 100.0 36 ..................................... TAGGAATTGATTGGGGTAACGCCATCGCCATAGAAG 192410 37 100.0 33 ..................................... TTACTTCATGACCCGGACATTTTACTAAAAAAT 192480 37 97.3 34 T.................................... TCCTATACCTTGTCACAATTTCCTCATATGGCTC 192551 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 192624 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 192699 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 41 37 99.6 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //