Array 1 319-71 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEKNT010000357.1 Sphaerochaeta sp. S2 k141_259, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================================== ================== 318 26 100.0 47 .......................... TTATGATACAATGGTTTATGCTCCCTTGCCTTTCTCGGTCTAAACGA 245 26 100.0 50 .......................... CTTTAGCTTTTCCCTAAATCTTGTTAGCCAACGTGAAGACGACAAGATGT 169 26 96.2 47 ....T..................... TTCTGATCAGGCACCACATATATTTCCTCACTCTTCAGCCAAACCAT 96 25 88.5 0 ...-....T...............C. | C [87] ========== ====== ====== ====== ========================== ================================================== ================== 4 26 96.2 48 TATGACCTGCTAAAAGGGATTAAGAC # Left flank : TATGAAACGTGACTTTTTAATATTATATGATATTGCAGATCCCAAACGGTTAAAAAAGGTTGCCAAATTCTTGGAATCAGAAGGGGTTCGTGTGCAGAAATCGTTATTTGAATGTAATTGGGAAGAAGGCTATGATATAATAATCAAGCATAGACTAAGAGAACTGATAGACCAAGCGAAGGATTATATCTTGCTCATTCCGAGGTGTTCAACTGACCTTCAGAAAGAAATTAAAATCGGAAAAGGATCCGATATAAAGGTTGATACGTTACCTCACAAGATTTTGTGAAACGCGAACCTCAGGATTCTGCTTTTTTACATAAAATAGCGTAGGGTTCGCGAGAAGGAGGAATTATTAACTATGACAGAAATTAGGAGTACAGCAATCTCAAAGAGATGGGACAGTTATCCCAGTTTAGTAAGAATGCTGATGAACTTCGCGAAAATCATGTTGCAATCTATTTCAATACCAATAAATACAAGGGTGACAGTCTAAACGA # Right flank : CTGCTTCATAAGCCGCAAAACCTTCAATCTTTTCACCTTCGTCACACCGTTTTGCACTGCTAACTGCGCTT # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.09, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATGACCTGCTAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.54%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 8923-9757 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEKNT010000396.1 Sphaerochaeta sp. S2 k141_316, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 8923 36 100.0 30 .................................... GGGAATCCTTGGTTTCGAGCGTCTTGATGG 8989 36 100.0 30 .................................... TATAGTTGATAAGGCGGCTGAGCGTTGCTG 9055 36 100.0 30 .................................... GCAGTCTGGAATGCAACAGCAGAGTATTAC 9121 36 100.0 30 .................................... CCTTCCATGCGTGCGATGTCGGCCACGGTT 9187 36 100.0 30 .................................... TCAAAGATAAACACCTTGTCTACCGTATCC 9253 36 97.2 30 ...................................T GCGAGCGTGATGATGCAATGAAGGAATCAG 9319 36 100.0 30 .................................... ACGGTTCTCCAAGCCACCTCGTCTCTCTGG 9385 36 100.0 30 .................................... TGGAAAAGGTGGCGTTGCTAGGCTCTTATA 9451 36 100.0 30 .................................... TTTCCTGTTACAGCAGGGTCAACGGCAATG 9517 36 100.0 30 .................................... GATACAAAGGATCCTTCAATCAGTCTTGAC 9583 36 100.0 30 .................................... GCTCAGGGATATCGGTGACCGTGAGGGAGA 9649 36 97.2 33 .....................A.............. CCGGTTGTTCGGCCCATCCCCCCCCCCGGTAGG 9718 36 80.6 0 ....................GAA.A....T....AG | AA,C,C [9738,9748,9750] ========== ====== ====== ====== ==================================== ================================= ================== 13 36 98.1 30 GTTTGAGATAGGTGTTATCTCGTAGGGTTACTGACC # Left flank : AACCAGGAAGACTTCTTCGAACGAACAGCTCAGATTAAATCTGCATTATTCCAGTACGCTTTGATAATTATGCAAGATACTGATGAATCGCTCATCTATAAGGATGAGATAGATACCGGTACATTGCTGAAAGTTTTCAGTTTTATGTTCGATTTTAGTGATCCCAGTCCAATAGAAAATCTTGTAACGTATGTAAAAGTTGCAAACAAGTACTTGGCAAAAAGCCTTTTTGTTTTTGTGAATGCAAAAAGCTTTTTTACGAATGAGGAGCTCAATTACCTCGTTAATACTGTACAAGGAATGAAATGTAATATTCTATTTTTAGAGAGTATTTACCGTAAACCCTTTGATAATAAAGAAAAATATAGTATAATAGATGTAGATCAATGTGAAATTTTCTAGAGAAGGAAAGATTAAAAATGCTCAGACTAAAACAGCCAACGTATGTTTACATAAATCAGACTTCTGTTGTAAAACATCAAAATACGCGTGTTGTTGAG # Right flank : GCAATATTGCTATTTACTGTATAGTAATATTTGATTTATTAAAATTCTATAAATCTTACTCTATAAGACCCATCACGGGTGCGTGGATTGTTTGAGGTAGGTGTGTGCAACAAAGCCGGTTTTATCTTGTGGAAGAGAAAATCCGGCTTTGTTGTTTTGTATCTAATGTATTGTTTTGCCGAAAGCGGGCAATTTTTTTTTATCCAGTAACGAATTAAAATTAAAAATCATATAAATTGACCAAATTTGGAGCAACTTCGACTCATCCATTTTTTCGGTGAGTTCAGATTTACACTGCACACTGTACGTTTTTATGTACACTGTCCTCGTTACCTCCAATCATGTAAGAGGGCTTGTCTGTACCTACACTTTACGTGGAGGATACAGTGAGTACCGTTGTTGACGACAGGCTTGGAAAGACAATCTATGCAGATAATATAAAGCTGATTAATGGCAAGGTTCAGAAGAGACCGATAGACTCTTTGAACAAGGCCGGACTC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGATAGGTGTTATCTCGTAGGGTTACTGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.70,-1.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //