Array 1 587685-589360 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKKO01000001.1 Winkia neuii strain UMB0402 .16933_8_44.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 587685 29 100.0 32 ............................. TATTGAGGCCGGGGGGATTTTACCTGCGTCCC 587746 29 96.6 32 ............................T GAAATCCCAGTACGAGGCGCAGGCTGAGGCGG 587807 29 100.0 32 ............................. CAAGCGTACCAAGGGCAAATCAATTTCTTAAC 587868 29 96.6 32 ............................T AATGGCATTAGATAGTAATATGTCCCTATTAT 587929 29 100.0 32 ............................. AGTGCGAGGCGTAAGCCAGCGCAAGCGTTGGG 587990 29 100.0 32 ............................. GGTTAGCCCGGCAATGTCAGCGGACCCGGGGG 588051 29 100.0 32 ............................. TGGTTCTTGTTTGCCATTTTCGGATTCCCTTT 588112 29 100.0 32 ............................. GCACGCCGTCCCTATGGTGGGCGATGGAGTAT 588173 29 100.0 32 ............................. CACAATGGTTCAACCCCCCACTCTACTCTTAT 588234 29 100.0 32 ............................. GAAGCTCCTAGAGCGATTCAATTTGAAGGAGA 588295 29 100.0 32 ............................. GTCCGTGCTTTCCGCCGGGTGGGGAATGCTCA 588356 29 96.6 32 ............................T AGAAAAAACCGGCTTGCACGTAAGGCCCGTTG 588417 29 100.0 32 ............................. TAGCAATGTGCATCAATTCCGCCTACAAACAC 588478 29 100.0 32 ............................. GCTCGCTTTGGTCTTTATTTCCTCAAAGTATC 588539 29 100.0 32 ............................. GCTCGCTTTGGTCTTTATTTCCTCAAAGTATC 588600 29 100.0 32 ............................. ATAAGACAGAAAATTGATACTGAATTAGGGCA 588661 29 100.0 32 ............................. ACGCTACCTTACCCGGCAGGATTTGAGCCCAA 588722 29 100.0 32 ............................. GCGGAAACCGTAACCTTTGTTTCCTCCCCACA 588783 29 100.0 32 ............................. CCTACGTTGGGGTAGATCCGGGGCGGGGGCAC 588844 29 100.0 32 ............................. AACATGGACTCCGACCTATGCCTGTCCAACCG 588905 29 100.0 32 ............................. CGGTTTAGCATTCAACAATATGCTGTTGGCAT 588966 29 100.0 32 ............................. CTACAGGCGGCAGGCGGGGATGTGCTGCTTAC 589027 29 100.0 32 ............................. GGGCCGCGTATGCTATGTATAAAAAAAGTGTC 589088 29 100.0 32 ............................. TGGTCTAATGAAAGCCTTTGGAACATGGTTGC 589149 29 100.0 32 ............................. CGGCACCGCGCTGGTACACACACCAAGGAAAG 589210 29 100.0 32 ............................. CTTTCGGTTGTGCGCGTGCCAGGCTGGGCGGG 589271 29 96.6 32 ............T................ CAGCTACAAAAGACTCTCAAGGGACTAAGCGC 589332 29 93.1 0 .C........T.................. | ========== ====== ====== ====== ============================= ================================ ================== 28 29 99.3 32 CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Left flank : AGCAAGGACGGTGCCACAGGTACCGACGAGGGTGGCAACGCTTCTGACGAGGGCGGCCACGCTTCTGACGAGGGCGGCCACACTAGCGATCCTGGCGCGCAACCCGGCACCCAACCTGGTTCGCAGCCTGGGGCAAAGCCTGGTTCGCAACCCGGTGCTCGGCCCAGCGGCGAAGGCAAAAATGCTGGGGGCAAAAACGCCGGCAAGTCTGATGCGGGACGGCAAGCGGGTGAGCCAAAAACAGTCGGCTCGTTCTTAGCCACAACTGGAGCGACAGCTTTAGTACCCACCCTGCTAGGAGCCATGGCAATGATTAGCCTGGGCGCAGTTGCAAAACTAAGCCGCAAAAAGAACTGACCGAGGCTAGCGTCAGAGGCTGAGCTGGAGAACTTAGATGGTGCGTTACTAGGTATAGATACGCGCCTTGCATGCGCCAGACTGTAAGATAGCTACCAGCATGGAAGAATGATATAGACGCCCAAAAGCGCAGGTCATTTAGT # Right flank : CTGGGAAGTCTCGCTATATGGGGCGGACAGGTCCTTTTACCCGGGAGAACAAAACAGGGAGAAATTTCGGTAAATGCTACTCGAGGGCTGTTCAGCGGCCAGTTACGCGTAACTCAGATACATGTAGGAATAATCGTTTAATATATCCTAGCCGTTTCTGTAGCTGTTGCATTTAGTTGCAGTAGTGGCCATTCTTATCTACACCTAACCGTATTGGTTTCAGGCTATTTAAGGATATTCCCTGTCGTAAGTTGCATGCCCTGTGATTGATCAACGTAGGGGCCGCGTCAGCAACCATTCCTGAGTCTTTTAGGCGTTAGAGCTGCAGCTTTTCCTTCAGACTTGCGTACCATTGTTCTCGTGTGCCAACAGTGGTGAATTGCTGGCGTCTAGGTGCTAATTCCTGTCCGGGAACATAGTCCTTTATAGTGGCGAACCGTTCTTTTGAGTTGCTGTTCGTTACGAATAGTGGCAATTTCGCGAAATCTTTTGTGGGACCT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //