Array 1 333389-332500 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHE01000049.1 Eisenbergiella tayi strain NML120147 BEI64_contig000049, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 333388 32 100.0 34 ................................ TACCAGACGCTTTTTCTCTTCTGCTACAGCCTTC 333322 32 100.0 33 ................................ TTCAAAGAAAGCCGGAAAGGCCATTGTAAAGGC 333257 32 100.0 34 ................................ CCTGTCAAGTGTTGGCTTCAACCGTAACCCACGG 333191 32 100.0 34 ................................ AACAGGGGAGGCGGTATTTTACTGGCCTGACAAA 333125 32 100.0 35 ................................ CCAATATCTCATTAGAATCATTTCGAACAATAATG 333058 32 100.0 33 ................................ AGATTATCAATAAAATCAACTTTATCCAGATTA 332993 32 100.0 35 ................................ GAAATAGAAAGATGATTAAAATAGTATGCTTGGAT 332926 32 100.0 34 ................................ CCCCGAATGACAGAAGCACCAGGTATCGTTTCAT 332860 32 100.0 34 ................................ AAATGAACAAAATACTATCATACAAGGCGCATCA 332794 32 100.0 35 ................................ ACAGGAACGAATGTTGGGTGGGTGAAACATATGCC 332727 32 100.0 33 ................................ TTCCAAAAGCCTTCCAATACTAGCAATTGTTGT 332662 32 100.0 34 ................................ TCAGCAGTTACCACAGAAAAGGCAAATCCGTATC 332596 32 100.0 33 ................................ CTATTCGCAATATTTATAGCATGAGGCTTATCG 332531 32 93.8 0 .............T..............G... | ========== ====== ====== ====== ================================ =================================== ================== 14 32 99.6 34 GTCGAGGCTTACGCAGCCTCGTGGATTGAAAT # Left flank : TTAATTAGCGTTATATCTGATAGATATAAACGAATATTTGATTACTTATTACCTTTAAAAACAGAACTAAAAATAAATGTAATTATTTGTTTGATAAATATGGAGATTAATTTTATATGTTTAGGACAAACATACACGATATAGATATTTTTTAGTATACTGGGGATCATTTTCTTGATTTATCTATGTGGCTATTCAGTAATACCAAGTAAAAAGTATTATTTGTATCATTTATTATGTAATATGTGAGTAGAAAATAAAAATCAGTGTTATTTGTTTTATATAGTAAAAGCAAAAACAGTTTACAGTTTTAAGAGAGAGATAAACAAGGTGCGAATGTATAGTGCACATGAAATTACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTAAGGGTTTATCATATAAAGGTATGTAGAAATATTTGTGTAAAAGTTATATTTGTAGTCTAAATCTTTATGTTTTTTTGAATGTTTTTGCT # Right flank : ATGGATATCAAATGATATATCGAACTTATATACAATATAATATTAGATGGAAAGACAGATGAAAATATGGATTGAAATATAGAATATATGTTAAGAAAAGAAATGACCATAGCCAAATATATAAGAAGTATATTTCACAATCTGTAGGAAAGAGTACATCAAAAGGCCATGTTGAGCCAGTTCATAAAGCTCTTGCTAAGCGCAGAAGAAGATGTACTATTCCAGATAAAGATGAAAGAGGTTGAAATTTTGGGAGGAAAAGAAGCATCAAGAGGTTTTTTATATCAGGCATTTGCTTCCGTTCTTGAAGCGTTGTGTCAGAAAAATTGGGATAAAATTTATATAGAATTAAAGTCAAATGATGATAAAGTTGATATTGCATTAGAAGAAAATGGCAGAATTATTAAAAGTATTCAAGTGAAATCAACAATTAATACTTTTAGCAAAAGTTCAATACAAACATGGCTAAGTGATCTTATTCGTGACGATGTAGGCTCGGC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTACGCAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 336915-336160 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHE01000049.1 Eisenbergiella tayi strain NML120147 BEI64_contig000049, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 336914 32 100.0 33 ................................ TGCAATATGGTATTCCCACTATTCCTTGCCCTG 336849 32 100.0 33 ................................ TCTAACCATTGGAGAGAATACATATAAGGAGGA 336784 32 100.0 33 ................................ CTGGCATCCATGCCTTTGATTGCCCCGCTGTCG 336719 32 100.0 35 ................................ GGAATGCCAATCCGTACCCTGGAAAATTGGGACCG 336652 32 100.0 34 ................................ CCCTGTATGAACAAACTACATCCATCAGAATCTC 336586 32 100.0 34 ................................ ATTACAACCTCTGTCATGAATATGACGAAAACAG 336520 32 100.0 34 ................................ ACATCGTCGCTTGCAGATAAAAATGCTTCTCTAT 336454 32 100.0 33 ................................ ATGGTAATACCTCGCTTTCTTTAAAAATAATTA 336389 32 96.9 34 .......................A........ TATCTGGGACAAGCCATGGATATTGTATGGGTTT 336323 32 90.6 34 ...A.......C.C.................. GGTACAGCGAAGAGGGATTTCTGGCACAGGCCCA 336257 32 90.6 34 ...........C........A..........C TGAGAATTGTTGTTTTCCCACATCCAGACTCTCC 336191 32 81.2 0 ...........C......CTT.AA........ | ========== ====== ====== ====== ================================ =================================== ================== 12 32 96.6 34 GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Left flank : ATCATGCGGATTTATGATATTATGAATGAAGTGATGAAGTGTTCCTTTGAAAAAGTGGTACAGGCGAGAGGAAACCGGGCCGGTTTGTATTATCATGGACGGATTGTGGACGCTTTTGAGAGGAAGGATGATGAAGCGGCTGAAAAAATAATGGATGAGCATATGAAAGAGTTGTATGAGAGCTTTTTTAATGATTTTAGGGATTGAGAATGCTGTATGGACTTATTTTATTAAGTAAACGTTATATTGAGTAAAAAAGAATTAGTGATATTTGTTTTTAGATGATAAAATAAGAGTTGAGTTTATAATTTTAAGAGGGTCATAAGTAAGGTGCGAATGTATAGTGCACATGAAAATACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTGAAGGCTTATTATATAAATGTGTGAAGATGTATTTGTGTAAGAGTTATATTTCGGGGTTAAATGGTTATGTTTTTTTGAATGTTTTTGCT # Right flank : TGCATGACTGGTACAGGCATTATTTATTGTATGTCGAAGCTTATGTAACATCGTGTTGAGTTTGGAGGAATAACGATGCTTATGTTGTCACAATTCTATGAAAAAATTGTAACATCCGAGAAAGCTTCCAATAGAAGATACTGTGGAGGCAATAACAATTGTGTCGAAGCATTTTAAGGTAATTTATAGTATGAAAAAATAATTATTTTGATTTAAACTAAAAAGTGTGCATAAATTATTTGTGTAAATATCTGAGTTATTTAAAGTATTATATGAGCCATGTTATAAAATATGGGAAGATCAAACAATTGTAGGAAGAGTATAGAAAAGGGATGAGTTATGGAACCTTCAAAAAAAGATTGGTTACTATATAGGGAAAAGATAGCAGGTTGGCAGGAAGCTTATATGGAAAAGCTAATAAAAGAATATGTCGATTATCTGAATGGTGACGAACCTGCATCTACAAAATTCTGGAGAATGGAAAAGCGTATCAAACAGGA # Questionable array : NO Score: 9.09 # Score Detail : 1:0, 2:3, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 348504-347949 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHE01000049.1 Eisenbergiella tayi strain NML120147 BEI64_contig000049, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 348503 32 100.0 33 ................................ ATCATATCATATAGCACCTGCCTTTTCATTTCC 348438 32 100.0 33 ................................ CAGAACAAACATAAAATTGTCTATTGTTAGACT 348373 32 100.0 34 ................................ TTACAGATGGTCATCACAGGAAGGCAGCTGCTGA 348307 32 100.0 34 ................................ TTCCGTGGTTTGTGTGATATGATCCATTTTTACC 348241 32 100.0 32 ................................ CAATACTAGCAATTGTTGTTTTACTGTTATAC 348177 32 100.0 33 ................................ GGTTGTCGGCCGGCCACAGCAGATGCATATATT 348112 32 100.0 33 ................................ AGATGCAGTATTATCTCCCACTACCATAAAAGG 348047 32 96.9 35 ......................T......... CGGGTTGCGGAAGAAAGCATTATGGAAACAGCAGG 347980 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 9 32 99.7 34 GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Left flank : GAGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTGTTTGTTGTTATAGCATAAGGAATAAGAACAATAAATTTTATAGTCATATAATAGTTTATTGTTAGCATGATTAGAGTTTTATTGAGTAAAAGTACTTGTTTAATTATGAAATTTGCGAACAGAGTTATTGTTAGTGCGAATAGGAAGTGCACATGAAATTCCCGAGAGATTCGCACCTGAAAAAGAGTTGTTTTAATGGGGAAGAGATTGAAAATAATTTATATAAAGATATTATGAGGTGGAAAATATAATAAGTATATAATTAAGTTTGTGTTATGAGATTGTTTTTTGGATATTTTTGCT # Right flank : TGTAAGAAGTCGCACCTTGCATTGATGTAAATTGCATATTATTCATAGTTAAAACTTATCCAATAGTAAGCTGTCGTTTTATGTATCTAAGAAATAAAAGAATACATCCACTAGACAACACATTTTCGCCCTTATGACGTTTGTCAATTATTATCTATAGTAAAACAAAGAACGATTTATAATACCTATACATTCTCTTACAAAATGAGGTGAAAAAATGGGAAAGAATGAAGATTCTTTCTTCCTGAATTACCTGCCAATAAGTATAACTTTGGTATCCTTGGAAAAGGCTGAATTACCCCCTTTTTTGGGTTCTGCCCTTCGCGGTGTAATTGGACAGGCATTATTTCAGGATAAGAATGCCTACAATTATCTATATCACAACGGCAAACTGAATAGTAATATGCAAGATATAATTAATCCGTATGTGCTCATTCCTCCTGATACAAAGAAGCAAATATACTTTGAAAAAGAGGAGCTAAACTTCAAAATACTTCTTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGAAGCCTATACGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 350328-349304 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHE01000049.1 Eisenbergiella tayi strain NML120147 BEI64_contig000049, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 350327 32 100.0 34 ................................ TCCCGACTCCCTGCGGCCCGGACAAGATTAACAT 350261 32 100.0 33 ................................ CTCATATCTAATTTCAATACCAAGTTCTTCCGC 350196 32 100.0 35 ................................ GCATCTCCTACAAATGTATCAAGGTCACACTTATT 350129 32 100.0 35 ................................ GCATGTACCGCACATCCTACAAGAATCATTATGCC 350062 32 100.0 34 ................................ AAGTCTAATAATGCGAAGCGCTTTAAGGCTTTGC 349996 32 100.0 34 ................................ TTATCTAAGTCTGAGACATAGCAGCCCCAACGGT 349930 32 100.0 33 ................................ AGCTGGCCGATGAGACAGAGGCAGAAATGCAGC 349865 32 100.0 34 ................................ TATATTTGTCCAAAATTCCCCGCGCCTTATCATC 349799 32 100.0 34 ................................ CGCCTTAATCCTCCGGTTCCTGGCAGGGGCAATT 349733 32 100.0 34 ................................ ATCTGCTCTGTTTTAGCAGCCTGCTCGGCATCGT 349667 32 100.0 34 ................................ CATCATTAAAGTGGCGGCCTTCTTGATAGCCCTT 349601 32 100.0 35 ................................ TTTTGACATATCGGAAGCCATGAGAAACCGATTCT 349534 32 100.0 33 ................................ ATATCCGGCCATTTCAATCTCTCCTCCAGAAGA 349469 32 100.0 34 ................................ CTTTGACATGTACCTCCCTACCAGAATGTCATTA 349403 32 100.0 33 ................................ CACAAGAGCAATTGTCTTACTATGCTGTTCCCG 349338 31 90.6 0 .............A...........G-..... | A,TTT [349313,349315] ========== ====== ====== ====== ================================ =================================== ================== 16 32 99.4 34 GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Left flank : ATGAATATCCACCTTTTTTCTGGAAATAGGAGGCTGTCATGCTGGTATTAATAACTTATGATGTGAATACGGAAACTGCCGCGGGTAAGTCCCGGTTAAGAAAAGTTGCAAAGCAATGTGTGAATTATGGAACAAGAGTACAGAATTCTGTATTTGAGTGTGTTCTGGATCCCGGACAGTGTTTAATGCTGAAAGCTGCATTAACGGAATTGATTGATGAAAATGTGGATAGCCTCAGATTTTATTATTTGGGGAATCAGAATAAGGCACGGGTTGAACATGTTGGAGTGAATAAGGGGATTAATGTGAAAGAGCCTCTGATCTTTTAGTGCGAACCTGAAGCGCACATGAAATCCCCGGGGGATTCGCACCGGAATTTTGATGAGATATTGCTTGGGGTTGCTTTTTGATGTGGAAGAATGTAAGATGTAAAGTGAATTGGGTGTGGATTGTTGGTGAAGATGAATAGGAATTAAGAGTGGTTTTTGTGCAAAATTGCT # Right flank : ATATTATTGCGATTAGGGTATTTATGTAAATCTCATAAGTATATTGCCATAACATTTTTTGTAGGCAATACGATGGGGAATTCATAGAGAAGAGTATGATTTGAGATAGGGAACAGGATAAATATATTATGAATACTTAAGCAAATGACGTTACCAGTCTGTCTTGTTTTGTCACGGATAGAAAATATATTAGAAAGATTACCATTATTAATCATAATTTTCATGGATAAGTTATTATGGCAGGATGTAGATATTATAAAAGGTTTTAGGTGGAAGTAGATGGAGATTTACTGAATGAAGGAGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTGTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACCACCTTGCGGGTGGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 358522-358164 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHE01000049.1 Eisenbergiella tayi strain NML120147 BEI64_contig000049, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 358521 31 100.0 35 ............................... CTCCTTAATAATGCAAATCAATGCCGCCCGGCAGT 358455 31 100.0 34 ............................... CATAATTTACTTATTCCAAGGACTGGCGGATGCC 358390 31 100.0 34 ............................... CTGATGCACCGTAAGTGGCATAAATGGCATCAAT 358325 31 100.0 33 ............................... CATATCCATGATGAAGTAATCCTGGAATGCCCT 358261 31 100.0 35 ............................... ATAACTACAGAAATCCATCCCTGATCGTTGGTGAG 358195 31 96.8 0 .............................T. | A [358184] ========== ====== ====== ====== =============================== =================================== ================== 6 31 99.5 34 GTCGAAGCCTTGCGGCTTCGTGGATTGAAAT # Left flank : GATATGATTGATTTTATTTTGCAGAACAGTTATTTTTAATTTATTTATCTATGGTAATTATACACTTGCGTGTATGAAATAGGAAGATAATTCTTGGGAAGAGTTGAATGGAATGAGGGGGAAGGGGTTACTGGATAGTGTTGAGAATAAAAATTGAAATTTGAGTAATTTACGAAATGGAGAAGAAAGTTTCTTATCATTTTGAAAAATATGTGATATACTTTTATTTATGGTATGAGGCTTTTGGAAGGTAAGTTTTTTGATGATATGAATGTGGGTATTTGAGAAAATAGTTGGTCAATGGTGATATTTGATAATTGAGTTATTTGGTGCGAATAGGAAGTGTACATGAAAATCCCGGGAGATTCGCACCTGAAAAATGGTGGATTTAATGGTGAAAAGATTGAGAATGATTAAAATGTAGTTATTGTGAGTGGGGATATTATAATATGTGTATAGATTGTTTTGTGAAATGAGATTTTTTTTTGGATGTTTTTGCT # Right flank : ATCTTAATATCCATAGAGTTCACATACTGCTCGAAGCCTTTACCGTGTCAAGTATCAAAAAAAATTTTCAACATCTACATAAAAATAGTAATTATAAACAAAAAATGTATTTCATGATATAATGAGTAGGATAAAATAAACAAAAAACACCACACTTTTGGAGGAATATTATGTTCTTAGCCCATATCAGTGAAGATAAGCTTCGTGAACAAAGTATTCTTGATCATCTGGAGGGGACTGCTGAATTGGCAGGTGAATTTGCCTCTGCATTTGGAACTGAAGCTTGGGGATATGGCTGCGGCATGATGCATGATATCGGCAAATATTCCGATAGTTTTCAGAAGCGTATTCATGGGGGAAAGCTGACGGACCATGCCACTGCAGGTGCCAGGGAATTATATCAAAGACATAATTATGTCTGCGCATATTGTATATCAGGGCATCATACCGGACTTTTAGATGGAGGAAGTGCGGCCGACGTGGGAGGCGAAGCCACATTA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTTGCGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAAGCCTTTGCGGCTTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 526514-526086 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHE01000049.1 Eisenbergiella tayi strain NML120147 BEI64_contig000049, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 526513 32 100.0 35 ................................ CTTACAGTCCGTTGGTTTGGTATAGTTCACTTATT 526446 32 100.0 33 ................................ CTTTGACACTGGACGGATACCGCAGAAAATTCA 526381 32 100.0 34 ................................ CTTCCTTTTGGTTTACCACACACTTTGCAATTAT 526315 32 100.0 34 ................................ TAATACAAGCACCCTCCGGAGCACCGTCTGCATC 526249 32 100.0 35 ................................ TGCCTCTTCTTCTACTATTTCAAGTTGTCTAAATT 526182 32 93.8 33 .............C.................A TTCTTTAAAGGCGATAATTTCACCATAGGATTT 526117 32 93.8 0 .............C.....T............ | ========== ====== ====== ====== ================================ =================================== ================== 7 32 98.2 34 GTCGAAGCCCTTGTGGCTTCGTGGATTGAAAT # Left flank : AATTTCATTCATAAGTAAGACAATGATTTGAAGAAAGAATATTGCGAAAGATTTGAATCAATATGAAATTTATCTTAGATATAGATACTGCAGGAGGTATTATAAAAGTCTTAGTTGAAGTATAGGAAACTATGTACAATTTACGAATTAATGAAGAAAGTTGCTTATCACTTTAAATTTTTTATGCTATACTTTAATTTATAGAAAAGATTGTTATTGTATAAGTATAACAAAATGCGAAGTAATATGTTGATTTGATGTTGGTATGAATAGAGTTTTCAAGGGTTAAGGGCACTGATTCAATTGGGAAAAAGGGAGCGATTTATGTTGGTGCGAATAGGAAGCGCACATGAAAGTCCCGGGAGATTCGCACCAGAAAAAGAGTTGTTATAATGGTGAATAGATTGAAAGTGTTTTAAATAAAGATTATATGAGAGAAAAAATAAAATAATTATACAAATTAAGTTTGTGTAATGAGATTACTTTTAGTTATATTTGCT # Right flank : AAGTTCGCCCCTGGAGAAATCCAGGGATTTTTTTGTATAAGCCCTGCGGTATTGTGAGTAGAAAAACAAAATTCAAAATATTGTAAAAAAGTCATTGTTTTGTGGAAGAATGATTATTAAAGGATAATGAGCTATATTTTAAAAGAATATTTTAAGAATGTAAGAGAGTGAAAGTTCAAAATTAACAAAACTATCAGAAAATCAATAATAAAAGAATTATTGATTTTCTGATATATTGAAACAAATGAATGTATTTATATTTGTTTTATGCTGATGAAACAATTAATTATCATAAGAGTAAGCCAACTGAATGATAGAAAGGATTTGAAATACAGGTTAAATATTATGAAATGGGAGATTGTCTGTGTTTTGTCCTTTTTTGTAGTGGTTGAAACATATGCTAATTCGTAATATCAAAAGGACAGAATTAGTAATCAGGCTGCTTACAAGGGACTAAGTGATGGAGATTGTGAAAGCATATGAGTTATGGAGGTGCAGTA # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCCTTGTGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAAGCCCTTGCGGCTTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //