Array 1 20282-20920 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEZG010000025.1 Klebsiella pneumoniae strain SCPM-O-B-7938 25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 20282 28 96.4 33 .............A.............. TATCTCCGCCTTTGCACCGCGGTGAGGTCATGG 20343 28 96.4 33 .............A.............. TAGTCCAGCGGGTGATCAGCGCATTATATTTGC 20404 28 96.4 33 .............A.............. CTAACCTTGGCTCTCTTCCAGGCGCCACGCATG 20465 28 96.4 33 .............A.............. CGGCTCTTTTTTATCTCCTTCATCCTTCGCTAT 20526 28 100.0 33 ............................ TGATCGGCGTGCCGTTTGTTGGACCCGAAATAG 20587 28 100.0 33 ............................ CGTCATCAGCGCCTTGTTCCAGCGGCGACCACC 20648 28 100.0 33 ............................ TCGTGCATGGTGAGGATTCTACAGTCGCACCAT 20709 28 100.0 33 ............................ TACCTCCCGGCGTCCGCGCCAGGGCGATCACGT 20770 28 100.0 33 ............................ CCTGCAGCTGGCCGTCGAGCTGACGGATGCCGG C [20775] 20832 28 92.9 33 ............T.T............. TTCATCACGTGTGAGCGGATTTGGCTCTATCCT 20893 28 89.3 0 ............T......A.......T | ========== ====== ====== ====== ============================ ================================= ================== 11 28 97.1 33 GTCTTCCCCACACGCGTGGGGGTGTTTC # Left flank : TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTCGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTTCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCTGGGGATGACAAAAGCGTTTTACCCCCGGCTGCGGGCCGGGCAGGCCAGTAGGGTAGACCGGTCCAGGTCAGCAGCAAATCGACGGTGGTTATATGGTGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTGTTGTAAATCTGGCGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : TCGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGGCATCTAAATCATTCGAGTTTATTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGACATTTTTGATTTTATAAAAAGTTATTTATAAGTTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGATCAGGGTTTCGCTACAAAATCAACATGCCATCGCGGCGATAAGTTTTGAAAACTGTCCAGCGAAAACCCGGATG # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACACGCGTGGGGGTGTTTC # Alternate repeat : GTCTTCCCCACACACGTGGGGGTGTTTC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 29674-33057 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEZG010000025.1 Klebsiella pneumoniae strain SCPM-O-B-7938 25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 29674 28 100.0 33 ............................ CAAAATTAAGGTTCCTGACTTATGCCGGTTATT 29735 28 100.0 33 ............................ TAAATTACTGGCAGTGGTTTTACTGGTTATCGC 29796 28 100.0 33 ............................ TCACATCACCTGGATTGTAGATGACATGCGTGG 29857 28 100.0 33 ............................ TCTTCATTGTGGGGCATCTGGGGCAGCCTTGGG 29918 28 100.0 33 ............................ TCCTTCAGGAAGCTGCTCTTCCAGAGGCTCCAT 29979 28 100.0 33 ............................ CATTGCCGCGCCAGCTGGGCCGCCTATCAATGA 30040 28 100.0 33 ............................ TGATAAAAGGTGGTGTGGAATGAAGAAGTGGCA 30101 28 100.0 33 ............................ CCAAATGAAGAATGATAAAAGGTTATGGTGTCA 30162 28 100.0 34 ............................ TGAGGTTGCGGCGGTCTGCATCCTTGATGAACGG 30224 28 100.0 33 ............................ TGCGTTGAGGTGAAGTGATGCACTTCAAGTCAC 30285 28 100.0 33 ............................ CCATACTCACCGAGCGAGCAAGGTTCCGCCCTG 30346 28 100.0 33 ............................ CAGCACGGTTCCTGATTTATGCTTTACCGCCCA 30407 28 100.0 33 ............................ CGGCGATGGTTGAGGTTTACATTGAGAAACTTC 30468 28 100.0 33 ............................ CACTGAACTGATTGGCGGCTCGCGTCATGTTGG 30529 28 100.0 33 ............................ CAGGACTGCATGATGAGGCAGGCAGCGCTGAGC 30590 28 100.0 33 ............................ TATGATCAATCTGCATTCCGTCAGGAATTTTCC 30651 28 100.0 33 ............................ TCACATCACCTGGATTGTAGATGACATGCGTGG 30712 28 100.0 33 ............................ CATCGAAAACTTTTAAGGGTAAATTATGGCATC 30773 28 100.0 33 ............................ TTATCCAGCTTGCACAAGGCATGGCATCTGGCG 30834 28 100.0 33 ............................ CATAGCGGCGTCTATTGCCTCGTTCAGGCGCAC 30895 28 100.0 33 ............................ TTCTTCCATCCTGGTCTACCACTTGCAGGCGCC 30956 28 100.0 33 ............................ TGATGATGCTGTCGCAACCCCTGAGCCAGGTTA 31017 28 100.0 33 ............................ TCAGTCACATCAAACGCGCAGGATTTGATATCC 31078 28 100.0 33 ............................ CTAACCTTGGCTCTCTTCCAGGCGCCACGCATG 31139 28 100.0 33 ............................ TATAACTCTGGATATCTGGCGGCCGTGGAGGCG 31200 28 100.0 33 ............................ TATCAACCAGCAGGAAGAGGTTTAAGCTACAGA 31261 28 100.0 33 ............................ CAGCTCGCCACAATCAGAAAGCAGCTCCTCGAT 31322 28 100.0 33 ............................ TAGAGAATCTCAGGCTTGTTAACAGGAGAGAAA 31383 28 100.0 33 ............................ CGGAAAGAGCACTCCAGGACTTACCACACGTAC 31444 28 100.0 33 ............................ TACTGCCGACCCGCAGGCGTAGCCTTTGTCTTC 31505 28 100.0 33 ............................ TCATACTGATATCATTCTTTGCTACTCTTTTCG 31566 28 100.0 33 ............................ CACTTGCCTCATCACTTATCAGGTTGAAAAAAC 31627 28 100.0 33 ............................ TACGGTTTCAGGAGTTGATTTTTCCTCATCCCT 31688 28 100.0 33 ............................ TAGTGATGATGGCTCTGATGATATTATCGTTGA 31749 28 100.0 33 ............................ CAGATGCTGATGTCATATCCGCCTATGCCGGAC 31810 28 100.0 33 ............................ CCTGATTATCGAGTGTAATTACTCAGACAATCC 31871 28 100.0 33 ............................ TAAGTGTTGTTGATGGTTGCACCTGTCAGGTTG 31932 28 100.0 33 ............................ TGAAAGCTGGTTGCCAGTCAGGCGATTGATGGC 31993 28 100.0 33 ............................ CATTTGGACTTGTATCACGCCACGTCCTCTTTT 32054 28 100.0 33 ............................ CCATGATCCTGTCCATGTGAATTGCGTTGGCAG 32115 28 100.0 33 ............................ TCAACGCAGGTTTGGGTTCACGTTCAGTCTGAG 32176 28 100.0 33 ............................ CGCGACGACCTCGTCATCCTCCCCGCTGCGGCT 32237 28 100.0 33 ............................ TACACCCAGCTCTTTGACGCAAAGGCTCAGGAG 32298 28 100.0 33 ............................ TCCTTGGTTCGTTTCTTCTGATGTTTGCAAGGC 32359 28 100.0 33 ............................ CTGGTTGACGTATGCCGTGATGCTGCTGGTAGG 32420 28 100.0 33 ............................ CGCTGTATGCCCCCCATCCTTCGCAAGCACTAC 32481 28 100.0 33 ............................ CGATGACAACTTTGCCTACTTCGCTGCGCTGGC 32542 28 100.0 33 ............................ TTCCTCTTCTTCCTGACAATCAGCGCAGCGCTG 32603 28 100.0 33 ............................ TGCGGGTGGATGACAATAACGCCTGGCGCGCCG 32664 28 100.0 33 ............................ CCTGTTAAGGATGACGCGGGGAAATGGGTTATC 32725 28 100.0 33 ............................ TCGATGGCGAGCTGCTGGTGAAAAAGTCGATAC 32786 28 100.0 33 ............................ TCCAGGCCAGATCTGTTTGGGTTGGTGTCGAAG 32847 28 100.0 33 ............................ TGAAGGTGAGCGCCAAAAGGAGTGGAAGCATGC 32908 28 100.0 33 ............................ CGGCTGCGTTATCCGGCAGCACGAACTGGACCT 32969 28 100.0 33 ............................ TGACCTTAGAGGCTTCACTCAGTGCCACTTTTT 33030 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 56 28 100.0 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTGCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT # Right flank : CTTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGAAAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGTCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATAAATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCTTACCGAAGGAAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTAGAGCACAGGTTACAAATTGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //