Array 1 882539-883699 **** Predicted by CRISPRDetect 2.4 *** >NC_022576.1 Candidatus Symbiobacter mobilis CR, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 882539 37 100.0 34 ..................................... CCACTAGTGCGTTCCACCAGTCGAGGCACTCAAC 882610 37 100.0 33 ..................................... TTCCACAACTGCCCAAGCATACGGAACATCGTA 882680 37 100.0 34 ..................................... TTGCGCGTTGTTACGTGTAACCAATGCCATGATG 882751 37 100.0 34 ..................................... GTCCCCTCCTTCATCCACGCTACTTACGCGCACA 882822 37 100.0 34 ..................................... ACCCACGCCGCAATCTCATCGTCACTTTTGCTCA 882893 37 100.0 32 ..................................... TTATTCAGGATCTGTTGATGCATCGCATTACC 882962 37 100.0 33 ..................................... GACAACGTCATGGCGACGTTTATTGGGGGGTAC 883032 37 100.0 34 ..................................... AAACAATACATTACAGGGACTGACGCCTACCTGG 883103 37 100.0 33 ..................................... CCTGATCAGGGAAGGACCGTACTGGTACGCTAC 883173 37 100.0 34 ..................................... CTTTGTAGATCAGCGCATTCTTTGCGCCGCTACG 883244 37 100.0 32 ..................................... AATATAAAGTCTACTTGTAATGCTTAAATCTT 883313 37 100.0 35 ..................................... CTTCCACAATTGACCAAGCATCCTAAACATAGTAG 883385 37 100.0 33 ..................................... AGTTTATCTTTACCAAAATGGTTAGCTAAATCA 883455 37 100.0 31 ..................................... TTATTCAGGACGTGTGCATGGAGCGCATTGC 883523 37 100.0 33 ..................................... AGAAACTTAATTACAGGGTATTTAATACTCTTA 883593 37 100.0 33 ..................................... TTTACTCTCCCACCAAGTCTTCTTTCTATATTC 883663 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =================================== ================== 17 37 100.0 33 GTCTAAAGACATGCCCTGATCTCAAAGGGATTAAGAC # Left flank : GAAACAGATGGCCCCCCACTTGACTGGAAAATCTCTGAACTCCAAGAAATCACTGGGCTTTGTCAAGCATTCTCAGGTACTGTCATACGTCAAGCTGATAAAGATTTTGCATTTGTTCGTTGCGAGTTGGGAGATGTTTTTGTACCGCCTGAACTGGCCAAGAATTTTGATCCGGTGCAACAATATAATGTAAAAGGAAAAGCAATGAGAAAAATTAATAAACAAGGAAAATCATGCTGGAGCGCAATACATTGTATTCTACAAGATTTATACATAAATCAAGCTCTGTAACATAAATAAAAACGATATGCATAATATCTAAAGATATTAGCTATTCCATCCAAAAAAATTTGGAAAGTGAGTGTGGTATGATGCCACCAAGCCAATACAGGAACCATGAAAACCTAAGCTGCAAGCGAGTAGCTGGTTTTTTTCAGTTGGGAATAATCTTCAAGTCGCAACGCAACTTATTGAAAACAAAAGATTTTTTGACGGTTGGA # Right flank : CCCACCGGATAGATTAGAGCCTATTTCAGTAGGCAATATGCCCTTAAAGTGATTAGGGCGCAAGTGAGGTGCAACATGGCGATATACGTTTCAGGAAGTTTTTCCCAACGCACCAGAATTCGGCGAAAGCGATTCATCCAGCTATGTGTACGTTCTACTACCCAGCGCCGTGCCTTGAAACCAGCTTCTTGCTTTATAGATTTAGCTTCTTCGCCTCTGGAACGAATGTGAGCCGTAAAGCCAAATTCTTTGACGATCTCTCTTACTTCATCAAAATCGTATCCTTTGTCCAAGCAGATGCCTTGTGGTTTTGTATCCGTCGGGTCTGGTCGTTTTGCTTTGATGTCTTCCAGCGTACTCCTGACCAACTTCATGTCGTGCCGATTCGCACCGTCGATGGCGACGGCAAGCGGTATGCCTGCACCATCAGTAAGCACACTGCGCTTGACACCTTGCTTGCCTCGATCTGTTGGGTTGGCCCCAGTTGTTTGCTGACCTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAAAGACATGCCCTGATCTCAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 884646-885590 **** Predicted by CRISPRDetect 2.4 *** >NC_022576.1 Candidatus Symbiobacter mobilis CR, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 884646 37 100.0 33 ..................................... AGAGACCAACTCTTCTGTCTTATTCATAAAAAA 884716 37 100.0 34 ..................................... GGTAGCTTCAGCAGCTACCACACCCGCTCCCGCA 884787 37 100.0 34 ..................................... CCCCTTTTCAGGAAGTGTATCGAAATCTGGTTCA 884858 37 100.0 33 ..................................... ATCTAAACCAGTAAGATAACCAGTAGGAATACC 884928 37 100.0 33 ..................................... ATACTCTACCCACTTAGCGGTGTCTCCGCCAGC 884998 37 100.0 34 ..................................... CCATCTGCCCGTTCAAATTGGGCCTGAGATTGAG 885069 37 100.0 32 ..................................... TCTTCCAATGCATAGAAAAATGAGGCCATTAC 885138 37 100.0 32 ..................................... ATTTTTGGCTTACCTAGCCTTCGCCACTCTTT 885207 37 100.0 32 ..................................... GTAGCGATATTTCGTTATTGAGCTTTGGCTGG 885276 37 100.0 31 ..................................... TCCTCTTTAACTTGAGTAGGATAATCAGAGC 885344 37 100.0 33 ..................................... TTCCAAAGATCTCTCATGAGATCCTCCTTCGGA 885414 37 100.0 33 ..................................... CATGCCAAAGGCACAGTCCGCCGACGAGCTTGA 885484 37 100.0 33 ..................................... ACTACTAGACCGACATCCTCCAGCGCGTAGAAG 885554 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== ================================== ================== 14 37 99.8 33 GTCTAAAGACATGCCCTGATCTCAAAGGGATTAAGAC # Left flank : ACACCTTGCTTGCCTCGATCTGTTGGGTTGGCCCCAGTTGTTTGCTGACCTGCTAGGGGCGCTTTGGTTAACGCTCCATCCATGGATGTCCATGCCCAATCGATGCCTTGGGATTTGTCGTATTCGACCAATTGTTGTATCCAAAGGGCTGAAAATACACCTGCTTTCGTCCATTCGCGAAAGCGTCGATAGGCAGAACTGCACGAGCAAATTCCCGTCATGTTTAAGGCGTTCCACTGGCAGCCAGTTCGCAATACGAAAAGAATTGCGTTCATTGCGCTGCGATCAGATACACGCGGATTATGGCAACCAAGGGGATGTTTTTTGGGTTCAGGGAGCGATGATTTTATTATTCCCCAGAGTGCATCATGCAATCTCCACCCATCATCATGAAATATCAGGCCCATAATTTTCCTCATCTGGGTTATTGCGACTGTGATGATTAATATTATATATCATTAGCCTACTGAAATAGGCTCTAATCCGGCATATCCTCTTCT # Right flank : ATTTCTGAATAAGCATATATATGCTTACCATCAATCTTAATAAATACCCTTATTACCGTGCTTCCTACCGCCCGGTAGCAACGGTCACGTTCACCGGAATCAGCATGCAGCGGTGTCACATACGACACAAAATCCGCCACACCAGCAAGCTTGCCATTCCCCCCATCCCGCAAAACCGCACCGACACTGCTCCCCATGAACTCCTACGACCCCCACCAACCCGCCGGCTATCCGCGCCGTGTTTTGATCGCCGTCAGCGGCTTGTCCCCGCAGATCGTCACCGAGACGATTTACGCCCTGGCCGCCGACCAGGACGAGGCTTTCGTTCCTACTGAAGTCCATCTGCTGACCACCGCCACCGGCGCGCAGCGTGCAGAGCTTTCGCTGCTCAGTGAAGACCTGGGCTGGTTCCACAAGTTGCAGGCCGACTTCCATCTGCCCGGTATCGCTTTCGACCGCAGCCATATCCATGTGATGCGCGATGCCCAGGGCAAGCCATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAAAGACATGCCCTGATCTCAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 2437805-2436455 **** Predicted by CRISPRDetect 2.4 *** >NC_022576.1 Candidatus Symbiobacter mobilis CR, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2437804 28 100.0 32 ............................ AACGGGCAAGGCCGTGGAAGGTAACAACATCC 2437744 28 100.0 32 ............................ AATTCAGCAAGCGTTACGGCTGGCATGTCAAT 2437684 28 100.0 32 ............................ TGAAAAAGCAAAAAGATAGGCGCGACGAGTCA 2437624 28 100.0 32 ............................ ATTTGCAAAAACAACACACAATGGCCAGAATT 2437564 28 100.0 32 ............................ TCATCACAAATCACATACTGAATTGGCATCGA 2437504 28 100.0 32 ............................ AACAAGCCGAGATGCGGAGTCCGCGCCATAAA 2437444 28 100.0 32 ............................ CAGCAAACTACGCAGCGCCCCTACCCGCGCCA 2437384 28 100.0 32 ............................ AAGAGCGTAACCGGTTCCTGTTTGAAGCGCGC 2437324 28 100.0 32 ............................ TGGCCAACCTCCCATGGATATCTATCTACTTC 2437264 28 96.4 32 .................T.......... GCCCAGGCGCACAACAAAGCACGCTCGTACTG 2437204 28 100.0 32 ............................ AGCCGGGAACGTGCGGCTAACGCCGAGGATGC 2437144 28 100.0 32 ............................ TATTCCCAGGATACCGAATCGGCATTGCAGAC 2437084 28 100.0 32 ............................ TGAACGATCGTGATTGGGAGGTCGGAGTCATC 2437024 28 100.0 32 ............................ TCGATCTCTAGCTCGTCTGGGACTACCATGCG 2436964 28 100.0 32 ............................ AACCGCCCAAACGTCAATCTCGAACACTACCG 2436904 28 100.0 32 ............................ GCTGAAGTGAGGCCGCGAACCGTCCATTCCGG 2436844 28 100.0 32 ............................ CCATAGCAGCAGCCCTGCGCACGCGATGAGAA 2436784 28 100.0 32 ............................ GCTAGAGGGGATGACGCACTGCACGTAGCAGA 2436724 28 100.0 34 ............................ CTGTTGGATCCTCCGTCGCGCACGCGGGGAAGTC 2436662 28 100.0 32 ............................ TGTCCGCATGGCGTGATGGCAGGCTCAAACAA 2436602 28 100.0 32 ............................ AAAAAGTGCCGCGACTATGCGGCTTCCAAAAA 2436542 28 100.0 32 ............................ ACACCAGAGCAATCCGCCGAGGGCGTGATCGA 2436482 28 92.9 0 ..........................GC | ========== ====== ====== ====== ============================ ================================== ================== 23 28 99.5 32 CTTCACTGCCGAATAGGCAGCTTAGAAA # Left flank : AAGCGTTGGGCAAGCTGATGGGGGTGGACTGGCTGCAAGGCATGCGTGACCACCTGGACCTGACACCCGTCAGCCCTGTGCCCGACCAAATGGGGTACCGGCAGGTCAAGCGCGTGCAACCCCAAAGCAGCCCCGAGCGCTTGCGCCGACGCCTGATGCTGCGGCACAAACTGACCGCTGAAGAAGCAGCCGAACGCATTCCCGATACCGTGGCCCAACTGGTCGCTTTGCCGTCGGTATTTGTGCGCAGCAGCAGCACAGGCCAGTCGTTCCGCCTGTTTGTGTGCCACGGCCCGCTGACGCCTGAACCCAAGGAAGGGGGCTTCAGCACCTACGGCCTAAGCCTGGGTGGAGCCGTACCCTGGTTTTGACCCTTTTTGGGATGGCGCAAAAAGTTCTTTGAAAATCAAAGTTCTGCAGAGCAGGCAACAAAAAGGGTGATCACCGGTTTTTTGCCGGTATCTCTTTTGCTGACAATCACTTGGTGCTGAATGGGTCTA # Right flank : CTATTTCAGTAGGCTAATGATATATAATATTAATCATCACAGTCGCAATAACCCAGATGAGGAAAATTATGGGCCTGATATTTCATGATGATGGGTGGAGATTGCATGATGCACTCTGGGGAATAATAAAATCATCGCTCCCTGAACCCAAAAAACATCCCCTTGGTTGCCATAATCCGCGTGTATCTGATCGCAGCGCAATGAACGCAATTCTTTTCGTATTGCGAACTGGCTGCCAGTGGAACGCCTTAAACATGACGGGAATTTGCTCGTGCAGTTCTGCCTATCGACGCTTTCGCGAATGGACGAAAGCAGGTGTATTTTCAGCCCTTTGGATACAACAATTGGTCGAATACGACAAATCCCAAGGCATTGATTGGGCATGGACATCCATGGATGGAGCGTTAACCAAAGCGCCCCTAGCAGGTCAGCAAACAACTGGGGCCAACCCAACAGATCGAGGCAAGCAAGGTGTCAAGCGCAGTGTGCTTACCGATGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //