Array 1 275159-274637 **** Predicted by CRISPRDetect 2.4 *** >NZ_AENV01000015.1 Selenomonas sp. oral taxon 137 str. F0430 ctg1126950130247, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 275158 35 100.0 34 ................................... CACAAAGTCCCGCATCGTGTCGACCCAAAACTGC 275089 35 100.0 38 ................................... CTGCACGATGTTGGTTCAATGGCCGAAAGAAAACCATG 275016 35 100.0 34 ................................... CCCAGGATTTGCCCCGCCTTGAAGACCTGTTCAT 274947 35 100.0 34 ................................... AATCCTCCCGGATTCCTGAGTCGCTCCTTTTATT 274878 35 100.0 34 ................................... TAAATATTACCAACGGTGTCCTCAAGCTCCCGGG 274809 35 100.0 34 ................................... TCCTTATGCTTCACGCCGCCGTCCTCCTATTTTC 274740 35 100.0 34 ................................... ATGAACTTTCCGTTCAGCCCGAATTCTTCGTCTG 274671 35 88.6 0 ...........................T...CGC. | ========== ====== ====== ====== =================================== ====================================== ================== 8 35 98.6 35 GTTGCACAGGCGAATACCGCTTGCGGTATTGAAAC # Left flank : TCGTCGACGTAGGTCTTAAACTACGCCTTCCTCGCGTTCTCCTCATCTCCTAGCTATGCATCGAAACTTCCGCGTCACTTATTTCATCCCTCACACAACATCATAAAAATATCTCGGACGGTTACATTCATGTAACCGTCTTTCCTATTAAAAAACATAAACATATTATTAATGAAACACTCGATGTGTTCGATAAAACCTCTAATTTTCAGAATTGGCACCCACATAGAAAACCTCCTGCGAACCCTGCGACCTGCATTCTACCGTCGAGGTTTTCCCTCGTTTCGCCAAACCATGGGAAAAGGACGTATAGAATGCCTCATATTTGCCCAAATCACCTCTCAAAACAGCAGAAAGCCATTGCCAAAAAGGGAAAAAATCGCTATAATACACACATCGGGCGAAAACCTCCGCCGAGACCGGAGAGCCGCATTCCACCGTCGAGGTTTTCAAAATGTACCGATTTACGCTAGCACCCGCGCGGCTTCAGCGGGTATGCT # Right flank : CGGTGAAAACCATTGATTTACGCGCGCGCTGTAGGGGCACGGCGTGCCGTGCCCACGTGCGATCCATGCGCGCCTATCGTTTTGTGCGATGCATGGAGACGGCGGGCGTCGTGGAATCCTTGATAGCGGTTTCTGTCGTTCTATGTTGGTATGTATCGGCGTAGAGACGCTAGTTGTTAGGTGTTGTTCGCTTTGCTATGCCGCCGTATATCGATCAAGGGCACGGCACGCCGTGCCCCTACGAGGGCGGTATATTGCGTAGCATTTGCGAGGATATGTACCGCTTGCGGTATTGAAACTACGAGATGTTCGCCTCATCGAAATCAAAGAGTGGTTGCACGGGCGAATACCGCTTGCGGTATTGAAACCCTGCATTGGCTGCTGTGTCGTCCGTCCATAGGCTGTTGCACAGGCGAATACCGTTCACGATTTTTATGCCTCGGAGCTGTTGTATCAACGCGCGTCTCTCGTTGCGGAGGGCGCGGTACATGTGATGCGGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACAGGCGAATACCGCTTGCGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : NA // Array 1 152862-156016 **** Predicted by CRISPRDetect 2.4 *** >NZ_AENV01000002.1 Selenomonas sp. oral taxon 137 str. F0430 ctg1126950130253, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ============================================ ================== 152862 34 100.0 41 .................................. GCTGGAGGATAATTATGAAAAACGATGTGTTTTGGGATGTT 152937 34 100.0 38 .................................. GCGCCTCTAAAGTTCGCGAGCCAAAGGTCGGCCGACGA 153009 34 100.0 38 .................................. CGCAGAATCTTCTACCTTCTTCGCGGCAGACATAGATT 153081 34 100.0 37 .................................. GCATTGAGTGCCTCCATATAGCAGACGTATTTGTAAT 153152 34 100.0 44 .................................. GTTCGGCACTTCGCCATTATCCTTGCGTGCGGCAAAGCACTCGG 153230 34 100.0 39 .................................. GTCCTATAGGTCTTTTGGTCTAGTAGAAATGTTTACCTA 153303 34 100.0 34 .................................. GAGATTCTCCCTGCCTCCTCCGCAAGCTTATGGA 153371 34 100.0 35 .................................. TGGACCGTCTTTATTTTTCTTTTCTAGTGTTCCTA 153440 34 100.0 39 .................................. AATATCGAGCAGAGGTACCGATACCTTAGTTAAATCTGC 153513 34 100.0 38 .................................. AAGGAAAGTGCACGCTGTGCCTCTCTTATAAGGGGATG 153585 34 100.0 41 .................................. CCATGGAAGAAATAGCATGTTAATCTTCTGTCCTAGTTGAT 153660 34 100.0 39 .................................. CTGCTTGCTAATTGGCTTTTCGAGCAAAAAGAGAAAGCA 153733 34 100.0 37 .................................. TTTACCAGTGATGTATTGCGATCACAAATATCATCAT 153804 34 100.0 38 .................................. ATTATCGTAGATGTCCTTTTCAAGAACACCCTCGCCTA 153876 34 100.0 39 .................................. CTCAATAATGGGGCTTTTTAAGGAGGGAATATAATGGAA 153949 34 100.0 38 .................................. CCGTCAATGCCTGTCTGTTGACGGCGCAATTTTGCGAA 154021 34 100.0 40 .................................. AAGAAGGAAATGTAGGGATAAAAGTCATTATACTCCCAAA 154095 34 100.0 42 .................................. CGAGAGGCGCTTGACCTCTGCCTTGATTACCGCCTCGTCCAA 154171 34 100.0 40 .................................. CAGGACGATTAAGGGGCTGTAACGGCTGTGCTGCACTGAA 154245 34 100.0 40 .................................. CAGGACGATTAAGGGGCTGTAACGGCTGTGCTGCACTGAA 154319 34 100.0 38 .................................. TATGAAGTCTTAGGCTATCCAAGAACAGAAGAACCCCA 154391 34 100.0 38 .................................. AATGGATATCTCTCCTGAGGGACAACTTGTTCAAGACA 154463 34 100.0 36 .................................. AGGCGTTATTGATCCACTCAAGGAATCCGTCCCATA 154533 34 100.0 39 .................................. CGGTCTACCTGCTCCATATTCAGTTTTATAGTCTTTTTA 154606 34 100.0 39 .................................. TTTGATGGAGGTTGTTCAATTCCTCCATGTAGACGGCGA 154679 34 100.0 35 .................................. GCGAAACACTCGGTCAAAACCTGCCGATTGACGGA 154748 34 100.0 38 .................................. TTCCTCCTCACTATACGCAACCCACTTGTCGCGGATTA 154820 34 100.0 37 .................................. TTCCGAAGATGGATTCGTATTCGTCGGAACTAAGTTA 154891 34 100.0 40 .................................. CGGACGCGGCGATCAACGGCCAGCGTAAATGATGTAACCA 154965 34 100.0 38 .................................. TGGTTTATGATTACTTCCTTTAATACACAACCCAACCA 155037 34 100.0 40 .................................. CTCTTGGGAAGTTGAATCTTATCTAGCTAATGAGTTGGTA 155111 34 100.0 36 .................................. ACTACGGCGGCGTTGGTGTTCTTCTCGTTTTTCATA 155181 34 100.0 39 .................................. AAGGCTTGCTTATCCTCCGTCCCCATACTGAGGAGGACA 155254 34 100.0 39 .................................. TTCTTTTTCATTTTGGTTTTCCTCCTCCTTTGCCGCTAA 155327 34 100.0 38 .................................. TTGTACAAGTATTGCGCTGTTATGCATGTAACGACTAA 155399 34 100.0 39 .................................. AACGAGCGATTCTTCATCCTCAAGGGAATCAAACGCTTA 155472 34 100.0 39 .................................. AAGGCTTGCTTATCCTCCGTCCCCATACTGAGGAGGACA 155545 34 100.0 39 .................................. CACTCGACCTCCGCGTGGAATGTCTCCGAATAGATAGCA 155618 34 100.0 39 .................................. ACGTGGAGTATATCCTCGACAATCCCATTGAGCGCGTCA 155691 34 100.0 38 .................................. GCGAAAGGTCGTGTGCTGCAAAGAAAGGGCTTTGCAGA 155763 34 100.0 42 .................................. ATGTCCTGTTCGAGGTCTGCTATAGTGTACTTCTTGTTCATA 155839 34 100.0 38 .................................. CTGGAACTCCCGCTCAAACTACTACTTATTGATACCAA 155911 34 91.2 39 ......................AAA......... CCGTAGTTCCGGCGTACCGTTGGATTGTACCAATCGCTA 155984 33 79.4 0 .....TA..A......T...........-..T.T | ========== ====== ====== ====== ================================== ============================================ ================== 44 34 99.3 39 TTTGACCAACACATCCCCGTTAGGGGACGGAAAC # Left flank : CTGAATAGCCTCCTGCAGAGGTGGAACACCTTCTCTCCACGACTGAAACTAGAAGAGGAAGACCTGCGGGGACATCTCGCGCAGCTTTGCCGTGTGAGCGGCTACAGCCTGCGCTCACAAAAATTCGGGATAGAAGGGCAGACAATTCACGGATTTGTAGGACGGCTGCGGCTCTATTTTGCTGCAAACGACATGCAGCGCAGACTCTTCGGCGTACTCTTTCGATTCGCCCCGTTTGCTGGGATCGGCATAAAAACAGCGCTCGGAATGGGCGCCGTCGATGTAGAATTGCATGATTGAAAACGCTTGTAATCGTGTGCACCATGAACGCACATTTGTCACCGCACCGGAGCATTTTTGCTAAATCCGCGCCGCGCTAGATTTGGCGCGGGTAGAGCACGAATTTTTTTATGGAGAAATACATCATGAAGCAGGAAAAACATATCCGCGCCGCGAATTATATATCTGAGTCAATATCCACGCGCCCTTGAGAGGACGGG # Right flank : TTCTGTGGGGGGGATGAATGCGCTATGCATCTGTGGCATATCCTTATGTTTGTATAATTTTCCCGGTATTTTCTCAAATAAAAAAGCTCCATACGGGGCTTTTTTCATGTATAATATTAAATATCAATGAACGGAGGAGGGACTCCTGTGAGTTTTATCTACATTACGGATGAGGGCGCAAAGCTTCAAAAGAAGGGAGATAAATTCCTTGTTGGTCGCAACCTTGAGATCCTCATGGAGATTCCAAAGGAGATTATCGAAGGGCTTGTCCTTATCGACAGTGTTCAAATTTCCTCGGACGCCGTTGTCGAGCTGCTCAAACTAGGCGTTCCTACGACATGGATCTCCACGCACGGGAAATTCTACGGTCGTCTCGAATCCACGCGCAACGTGGACGTATTCAAACAACGCCGTCAAATCCTCTCGCAGGAATCGGAGTTCGCGGTAAAGCTCTGCAAAAAGATTGCCGCCGCGAAGGTTCATAATCAACTCACGCTTCT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTGACCAACACATCCCCGTTAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.10,-11.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 2 174768-175426 **** Predicted by CRISPRDetect 2.4 *** >NZ_AENV01000002.1 Selenomonas sp. oral taxon 137 str. F0430 ctg1126950130253, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =================================== ================== 174768 35 100.0 34 ................................... AATTAACTTCCTCCTTATCCTTTCAAGACCTCTC 174837 35 100.0 35 ................................... TTCCATGACTTCATTTTAACTACCTCCTAATCAGA 174907 35 100.0 35 ................................... TTATCTCTTCTAATGGCGTTAGTATGATATTCGAA 174977 35 100.0 34 ................................... CATCATTCGAAGTCATGATAACATAGACACCAGT 175046 35 100.0 35 ................................... ACGGCAGAGCGCAGGCATCTTCAACGCCTCCCGCA 175116 35 100.0 34 ................................... AGGGCCTGTCTGGGCGTGGACGCGAACTCTCTAC 175185 35 100.0 34 ................................... TTTGTGCCGTCAATGTATGCGTCCTGAGTGAGGA 175254 35 100.0 34 ................................... TTGTTCGCCATTGTGAGCACCACTGTATTCGAGG 175323 35 100.0 34 ................................... TTTGTGCCGTCAATGTATGCGTCCTGAGTGAGGA 175392 35 97.1 0 .....................C............. | ========== ====== ====== ====== =================================== =================================== ================== 10 35 99.7 34 GTTGCACAGGCGAATACCGCTTGCGGTATTGAAAC # Left flank : TACGAAATACGGCGCAAAAAAGAGCGAAGCAAATCATAATGCTTCATAAAGGGCGTAAAAGGAGCGCCCTTGCGTCGCCCCATCCTCTCCGCGTCCCGTGCCAATAGAATCCCCCCTTAGTAGCCTGTTATATTGATTCGAGCGATTACGTCTGCTTTCCTGCAAATAGTATAAAAGAAAACGTGAAAAACAAAAATAATTCCTACTGCCAAAATTGGCCTACACATAGAAAACCTTTCGTGAACCCTGAGACCCGCATAGTATCGTCGAGGTTTTCGATCACCCCACTAAAACATGGGAAAAGAGGGGGCATATTAGCATCTTTTTTTCAATGTAGCCCCTCAAAAAAGAAAGAAAATCTTGCGAAAAAGGGAAAAAAATGATAAAGTACACACATCGGGCGAAAACCTCCGCCGGGACCGGAGAGCCGCATTCCACCGTCGAGGTTTTCAAAATGTACCGATTTACGCTAGCACCCGCGCGGCTTCAGCGGGTATGCT # Right flank : CTCCATGAATTGGCTCTCACAGAGGTCAATCTCGGTTGCACAGCTACATATTTCATACAAAAAAATACCACTCGAAAAATCGAGTGGTATTTTTGCGTGGAGATGCAATGCGAACATCCTTACAGGGAAAACCTTCTCAAAACGCTTTGTTAATGATTCCAAAAGTATGAGATTTAGCGTATAATCACTATGATGATTTGAGAGCTATTTTAACTACAGGGATTTGCGCATAGATATTAGGAAATTCGTGATGTGTGAGCGAGAAAGGGCGTGCTCCCAGGGATGAATGAGAAGCAAAAGGCGATACTGGCAGAGCTCAACGAGCAGCAGCGTCTTCCGGTGCAGGAGTATAAAACACCGTCGCTCATTATCGCGGGGGCAGGGGCGGGCAAGACGAAGACGATTGTCTCTCGCACTGCCTATATGATTGAGGACGGCGTGTCACCCGCTAATATACTGTTGTTCACTTTTACGCAGAAGGCTGCGGATGAGATGCGAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACAGGCGAATACCGCTTGCGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : NA // Array 1 118501-111794 **** Predicted by CRISPRDetect 2.4 *** >NZ_AENV01000008.1 Selenomonas sp. oral taxon 137 str. F0430 ctg1126950130257, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 118500 31 100.0 36 ............................... CGCCGGCGGCGCGTGCACGGATTGATGAGATGCAGT 118433 31 100.0 36 ............................... TCCCTCTCGGACTGCTCGATGGAGGTAGCAAGGCGT 118366 31 100.0 35 ............................... ATTCTCCGGCAGGGAAAAGACCTCATGCGGCAGGT 118300 31 100.0 36 ............................... GGCTGGGTACATCGGGAGACAGGGCTTCGTCGTTGT 118233 31 100.0 35 ............................... ATACGCTTGGCGATGCCCTCGGCGATTGCCGTTGT 118167 31 100.0 37 ............................... GTCACGGTGCGCTCTCTGCCGCCCTCTCCGATGGCGT 118099 31 100.0 36 ............................... CTGCAAGACTTAGAACGCCGCCGGGGGAACAGCTGT 118032 31 100.0 36 ............................... GTGAAGGCATACAAAAAGCGCCCCGCAGGACGCTGT 117965 31 100.0 35 ............................... CACGCCGTTGGCACCCTGCTTGATTCCCGCAATGT 117899 31 100.0 35 ............................... AGACGCCCCTGTGCTGCGATTATCCAGTCCGGCGT 117833 31 100.0 35 ............................... TTGTTGTGGCAGTACTCAGACGCATTTCAAATCGT 117767 31 100.0 34 ............................... GGCAACGGCGCTCCTTATGAACGAGTCTTCGAGT 117702 31 100.0 36 ............................... GAAGACTATCATGTGAATATCACAGGGTCGGGGCGT 117635 31 100.0 36 ............................... CCTTAACCACTCCATGTATTGCACGGCGTTGAGGGT 117568 31 100.0 35 ............................... GTCGACTGTGAGCGGCTCGCTGACGCTCTCGCCGT 117502 31 100.0 36 ............................... ATTTGTTCCTCCTATCACCGCGCCACCTGCCCGCGT 117435 31 100.0 35 ............................... TTTGACAGCTTATTTGACAGCCTGGGGGTCTTAGT 117369 31 100.0 35 ............................... TGTCTCATCAAATGGGACACGCGGCGTGAGCATGT 117303 31 100.0 37 ............................... TTCTTGGACTTGACACCGTCCACGTAGTAGTCGGTGT 117235 31 100.0 36 ............................... ATGTTTCCTCCTTACGCACTCTCAGCCGCATAGGGT 117168 31 100.0 36 ............................... CGTCGTGGCTGTTCATATAGTCTATGACTTTGCGGT 117101 31 100.0 36 ............................... TATGCCGGCAGATTCTGGAAAGCGGTCCACCTCAGT 117034 31 100.0 36 ............................... GTCCTGTACCCACTGCGGGGGCGATATGACAACCGT 116967 31 100.0 36 ............................... CTGCCATGCAGCAGACAACCTCTTGACCTCCGCCGT 116900 31 100.0 36 ............................... CTTCAATTCATCAATGAGCAGATCAATGACCGCTGT 116833 31 100.0 35 ............................... GTTAAGCTCATCAAATCCGCTAAAATCAATCTCGT 116767 31 100.0 36 ............................... GGACAAAAACAGCGGCATACGGAGGGCTGGAAGAGT 116700 31 100.0 35 ............................... GCCTTGACGTAGCCCGCAGGGAGATAGAGACTCGT 116634 31 100.0 34 ............................... AGCAACCGTCCGAGGATCGGGACTTCCTCCTTGT 116569 31 100.0 36 ............................... GTATCCGCGGAAGAAGCGTTGAAATATGCGCACGGT 116502 31 100.0 35 ............................... TTGCCCTCGCGCTGGTACTTCATGAGCGCATCGGT 116436 31 100.0 36 ............................... AGCAGACGCACGTGATCCAAATCTCTCATCTCATGT 116369 31 100.0 36 ............................... GTCTAGGTCATAAACGAACGTGTTGAGCGCAGCTGT 116302 31 100.0 37 ............................... TACACCGATTGAGAGAGCCGCTCGGTTTTTGGTACGT 116234 31 100.0 35 ............................... TATTTCTGATATGCCTGTTCTACAATATCGAGAGT 116168 31 100.0 37 ............................... CCGTATCATTTCGGCACTTTTCAAAAAGTTAGGGGGT 116100 31 100.0 36 ............................... CCTCATAAACCCTCATGGCGGCGTAGACTCCACAGT 116033 31 100.0 36 ............................... TCAAAAAGTTGGGCGTGAGAGAGGATCTCAAGAAGT 115966 31 100.0 36 ............................... TGCCTTGATTGTGCAGAGGAAAATAGTGAGCGGTGT 115899 31 100.0 35 ............................... CCTATAGGGGCAAATGACACTTTTAATACAATTGT 115833 31 100.0 36 ............................... TTTGGCGGCGAACGCGTCTGTGAGAATCTGCCGAGT 115766 31 100.0 35 ............................... CGTCTGCGTCGTTCTGTGTCTCGCCGAGGTAAAGT 115700 31 100.0 35 ............................... ATTCTCCGGCAGGGAAAAGACCTCATGCGGCAGGT 115634 31 100.0 36 ............................... ATCACCCATTTGTTTTCTGGCATCGGCCGCACCCGT 115567 31 100.0 36 ............................... ATGATCCACGCATTGCTTTTGCCCATATCAACCAGT 115500 31 100.0 36 ............................... TATGTAGCCCGCAGGGAGATAGAGACTACCTCGCGT 115433 31 100.0 36 ............................... TGAAACAGCCACGTACCGCCGCCTAATGCCATAGGT 115366 31 100.0 35 ............................... TGTATAAGTAATAGTACGGATATTGGGATCAATGT 115300 31 100.0 35 ............................... ATGTTCTTTTTCCTGCTGCCGTTTCCCTATATAGT 115234 31 100.0 36 ............................... AAGTATTCCTTCTACACTTTCTGCCGCCATTTTTGT 115167 31 100.0 36 ............................... TGGCTTGCACGGCTAGGATCGGGCGTAGCCGAATGT 115100 31 100.0 36 ............................... CGGTGTGTTGCCCAAAATGCTATCGCCGAGGGACGT 115033 31 100.0 36 ............................... AACTAAAACACAACTCGAATTATTTCAGTACCTCGT 114966 31 100.0 36 ............................... ACCATCAAAGAGACGGCGATTCATCATGCGGACGGT 114899 31 100.0 35 ............................... GGCTGCAGGAGATAACGCCCCTGCAGATCCTTGGT 114833 31 100.0 36 ............................... CGTAATAATCTATACTTAGCATTTCGGTTTCTCGGT 114766 31 100.0 36 ............................... CCTATAGACGCCTACGTTTGTATATGTTATCCTGGT 114699 31 100.0 36 ............................... TACCTGAAACGTTTTGTAATGAAGCTATACTACTGT 114632 31 100.0 36 ............................... TCCATCGGACATATCTCCCTGCGGAGTGGCTGCGGT 114565 31 100.0 37 ............................... TCTCCCGGCGCTGCATAATTCCCGCGCCCAGGAGCGT 114497 31 100.0 36 ............................... CCCTATAACATCCCCTAAAGATTCACCCGAGCCTGT 114430 31 100.0 36 ............................... TTATATCTCCCCGCGCCGAGATACAAAGATCCGCGT 114363 31 100.0 36 ............................... TCTCCCGGCGCTGCATAATTCCCGCGCCCAGGAGGT 114296 31 100.0 35 ............................... GTATTTTGGGATGCAAAGAAGCAGAACAAGCGCGT 114230 31 100.0 37 ............................... CGACACAATGTAGTAATTGCACGGCTTGACGGGATGT 114162 31 100.0 35 ............................... CCGCTCGAGCGCCAATATCCATGTGCGTCGATCGT 114096 31 100.0 35 ............................... GACGTGACGATGGTCGGCAAATCCTCGTTGTAGGT 114030 31 100.0 37 ............................... ATCCACCCGTACAGGCTCTAAGATGTACCGCCGCAGT 113962 31 100.0 36 ............................... GTGTATGCGTAGAGCTTCGCCTCGCCGTCGTCGAGT 113895 31 100.0 36 ............................... GTATACCCCCACTTGGTAGTCCTTGTTGTCGGGCGT 113828 31 100.0 36 ............................... AAATCCGTGAAATGGTCGCCCCACTTCTTTGGCAGT 113761 31 100.0 36 ............................... AGGAGGTGGAGCGCAACGGAAAAATTTACCGTACGT 113694 31 100.0 36 ............................... CTGCAGCTGCGCAAGGCTGCTGTTTTGGGCGACGGT 113627 31 100.0 36 ............................... ATCGCTGATGACCGCCGTCACGTTCTTTGCACCTGT 113560 31 100.0 35 ............................... GTTTTGAAGGAGCGTCCGCACGCAGAGAAGATGGT 113494 31 100.0 35 ............................... TCGACCGATTCGATCAGCACGTCATTCAGGCGAGT 113428 31 100.0 36 ............................... CTGCAAAATGATTGACCGCCGCAACGACCGCGTAGT 113361 31 100.0 36 ............................... TTTGGATGCGAAGGCGTCCGTCAACACTGCACGAGT 113294 31 100.0 35 ............................... AAGTAATATGCAATAGCACATGATTTTTAAGGTGT 113228 31 100.0 36 ............................... TCTTTCGTCGCGATTGGATTGAGAAAAGAGATATGT 113161 31 100.0 35 ............................... GACGGCGGTGCAGTCCTCGGACGTTGGCTCGAGGT 113095 31 100.0 36 ............................... TTGCGATGTCCATAATGTCGGCAAGGCTATAAAAGT 113028 31 100.0 36 ............................... TCCACCGCTTGCGTAGATGCTCTTGAGCACGTCCGT 112961 31 100.0 35 ............................... GCTCTTGCCGCCGCCTGTCAAATGGGGCTGATCGT 112895 31 100.0 37 ............................... AGCGGATGTGAATACCTGGATTCCGTCCGCAGCAAGT 112827 31 100.0 36 ............................... ATCAGATCCTCGAGTGTGAACTCCTGCGGCGGCGGT 112760 31 100.0 37 ............................... AAGCTTACGGTAGAACGTAGAACGGCTAACAGCAAGT 112692 31 100.0 36 ............................... GTTTCGGGCAAGCCTACCAGCTCGTCTATGAGGAGT 112625 31 100.0 35 ............................... TATCGCCCGTATGAAAGAGAATGCAAAGGCATTGT 112559 31 100.0 36 ............................... AACATATACACTGCAAGAAGTAGATGAGGACATGGT 112492 31 100.0 36 ............................... CCCGAATGAGCCGATGTTTGAAATGATATAGACAGT 112425 31 100.0 36 ............................... CAGTTCCGCCTGCGCGGGCGTTTTCTCCTTGAGGGT 112358 31 100.0 37 ............................... TAGGGTGTCTTCTAGTATCTGCTCTCGATAGCCTCGT 112290 31 100.0 36 ............................... AACGCGGCTGCCGAGCTCCGCGGCGACAGTGCGAGT 112223 31 100.0 36 ............................... TCGGAAAAAGACTGGGAAGATGACGAAATCCCCGGT 112156 31 100.0 35 ............................... CATCCGTCAACTAACATGTCGCTAGGACGGATTGT 112090 31 100.0 35 ............................... GCAAAAAGGTATTGACGCGAAAATTGCTGTGTGGT 112024 31 100.0 35 ............................... CTACGGCGGGGTCGTCTTCTCCCGTCAAGCGGGGT 111958 31 100.0 36 ............................... ACCGATGCGGATGTGACCGAGCAAAACGAGGAGCGT 111891 31 100.0 36 ............................... TTCTCTTGAGAGAATCCAGTAAGACCGACGCCAAGT 111824 31 87.1 0 ....................C.C..CA.... | ========== ====== ====== ====== =============================== ===================================== ================== 101 31 99.9 36 CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Left flank : TCCGCCGTTCCTATGGAAGTAGGAGGGGGATGTCATGTATGTTCTGATTACCTACGATATCAAAACTGTCGATGTCGAAGGGAGGCGGCGCCTGCGCCAGGTTGCGCGGAAATGCCGCGCATATGCACAGCGCGTGCAGAACTCTGTCTTCGAGTGTAAAGTAGACCCAACACAGTGCAAACAGTTGGAACTCGCCCTGCTTGACATCATAGACCTGCAGGAAGACAGCCTTCGGTTTTATTTTCTCGGGAAGGATAAAGGGCCGAAGGTGAAGCATTACGGAACCAAAGAGTCTTACGACTTGGAGGCGGCCGTCATCATCTGAGCAGTTCTTTATGAGTGCGAAGGTGAAGTGAACAGAAAATAGCATGATAAAATATAGGCGGAAGAACCGTGCCAAAGGAGGGACGTGGGACGAACCGCCGAGAAAAATCGTATTTGTGGCGAGTAACACCCATAAATACGTGGCAAAAGGCTCCCTTTGTGGAACCGGTTGCTGT # Right flank : AGCTCACAGTGTGTATGGAGACCCTTGCTGAGCCACAAGATGGAGCCGTTTTCTTCGATGTGGGGCGCTCCTGCATTTTTGAGAGGATGGCTCAGATGACATAAAAGGGCTTGTTGCACGAATACGTTTTTAGCATAGGTGCAGCAAGCCCTTTTCGTATAAAAATCAGCCTCTCATTAGTTCAGCTTTGAGCTTACGATAGGTGCGTGTCTCGTATGCGCCGATTTGGGACTCGGGGTGATCCGAGCCGTAGGCGTGACCGCTGACGGAGAGGATGGGCGGGGACTGGATACGCTTGGCGACTGCCATGCCGGTATAGAGCCCCCACCAATGTTCGAGGTCGGCGATGAAATCCGTTGCCGTCGGGAAATATGCGGCGACAAGTCCCGCAGCGCAGCCGATATATTCTTCGAGCGTGTTTTTCGCATATGCCCGCAGGATGTCCTCGGGGAGACGGTTCTCCTCGGCAAAGGCGCGGAAGAGGTAGTCGTGGTACGGGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.30,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 132389-132222 **** Predicted by CRISPRDetect 2.4 *** >NZ_AENV01000008.1 Selenomonas sp. oral taxon 137 str. F0430 ctg1126950130257, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 132388 33 100.0 34 ................................. ACGGTGATTATATCATGCCGAGGGAGTAAAGAAA 132321 33 100.0 34 ................................. GAGGAGACGGCGGAATACAAAGAGATCACCGCCA 132254 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ================================== ================== 3 33 100.0 34 GTCGCGCCGCGCATGCGGCGTGTGGATTGAAAC # Left flank : AATGTTTGAAAACAACGACTCATCGGCGCGTCTTAAGGGGACAATAGAGATGCGTCGACTTTATTTGGATCGAACACAACAATAAAACTGATGTCTTATCGACCGGAAAAGCGCATCGGGGTGTCACCGGGCATAAAAAGACGGCGTAGATTATGCGCTAGAGGGTATACTTAAACTGAGGGACAGATATAATGTGCGCCGAGCGACCGAGCCCTCCAGTAGAGCGCATCCTCTGCGGGCGGGTGAGGAGGTATGCCGATATACAGGGAATCTCTTTCTAGTAGTTTGGCAGATGAAGCGTTGGGAAAAACTGCTATAGGTTTTATTAGAGTAACTCTTTATGTGTGCGAAAGTGGAGTGAACAGAAAATACCGTAATAAATATAATAGGAATACCGTATCAAAGGAGGGCTGTGGGACAAAACGGTGAGAAAAAACATATTTGTGGCAAGTAATACCCACGAATATGTGGCAAAAGAAACCTTCCATGGAACCTTTTGC # Right flank : CATCTGCAGGTTGGGGCGTTATTTGCTTCGCACGGTCGCGCGCCGACGAGTGCGTGGATTGGCACTTGTAGATTTGTCTACGATTTGCCTACAAAATCTTGCTTCACTTGACACAGTCACGCAGATTAAAATTCATGAGAACTTTTCAATTGATTTTGAAAATTTTATGGGAATAGCAATTGAAACACTTGTACCTTTGCGTTATGTATGATATACTATCGTCATATCCAAGATGAGGGCGCTTGTTTTTTGAGGCGGCGACGTTACAACTTGTGTTGAATCGCGTGGATTGAAACATTGCCGATCCGTTGAGACCAAGAGTGAGAGTGTATCGTGTCGCCCTAACAACAGTGTGGATTCAAACGATATTATAGAAACGACATTATTATAGGCAACAAGAACCGGAGTGTGGTAAGATTTGCTTCACGATATTCAAATCGGCAGATATTTACCGGGGGATTCGTTCCTGCACCGCATGGATGCGCGTGTAAAAATCCTCT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCGCGCATGCGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCGCGCATGCGGCGTGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.90,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //