Array 1 342325-342891 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP009230.1 Aggregatibacter aphrophilus NJ8700 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
    342325	    32	 100.0	    34	................................	ATCTGAAATACCTTCAATATTGGTTACTATCCGA  	
    342391	    32	 100.0	    34	................................	TGGGGTTTACTGACATTGACGCCTGCGTTTGTTG  	
    342457	    32	 100.0	    35	................................	TGCTTAATCTAGGGGTTCATCATGGTAAAAATCAT 	
    342524	    32	 100.0	    36	................................	ATATTGGTAGATGTGTTGAGTCGTGACTTAGTAAAA	
    342592	    32	 100.0	    36	................................	TCAAAAGAAGCTGTTCAACATAACAATCACATTATC	
    342660	    32	 100.0	    35	................................	CAGCATTTGAATAGCGTTGAGTACCGTATCATACC 	
    342727	    32	 100.0	    35	................................	TTAAATTTGCGCGATGACGCTTAAATGTAGCTGTA 	
    342794	    32	 100.0	    34	................................	ATCTATGTAATCCTTATTTATTACATAGCCATTG  	
    342860	    32	  84.4	     0	......A...T..G.A......A.........	|                                   	
==========	======	======	======	================================	====================================	==================
         9	    32	  98.3	    35	GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC	                                    	       

# Left flank :   TTGATGAGATAAACCATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTACGCCGTATCGCAAAACATTGCTTAGATTACGGCGTGCGGGCGCAATATTCAGTATTTGAATGCGATGTCACGCCTGACCAATGGGTCATGTTGAAAAATAAACTGTTGGAAACCTACGACCCTACATGTGACAGCCTGCGTTTTTATCATTTAGGCAGTAAGTGGCGCAATAAAGTGGAGCATCATGGGGCAAAACCGGCAGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGTTCTCATTAAAACTCTGATGGGATAGCGATCCTTATTTTCTTTAACAATTTGGATGAATTAATCTATTTGTATAACGACAATGTGGCCGTTATACTTACCAAACTCCTTATCATAAAATCAGTTAGCGAAATACGGTGTTTAATACGCTGATTTTTCTTGCTTTTTTAGGTAGGGA
# Right flank :  CAAGATGTCGAGCAAGTCGCGCTCATTTTGTGCGGTGGCAACCACCTTCGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGATCTATAAGTTTCAAGCCTTTCTACAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTGGGGTTAGATCATTTTAACTGCCCTTTTTGTTTATCTATGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGCAGGTCTTGAATATCCGATTTCAGTACATCAGCTTTTGGCCCATAAATGGCTTGAATGCCAGTGCCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGAGGCTGCATCACCTACCAACTGAGGGTTGTGAACGGTGATACGTAAACGGGTCATACAAGCATCCACCTCGGCAATATTGTTGCGTCCACCGAGAAGATTGATGATTTGCACCACTTGTG

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-4.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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