Array 1 50-997 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUMV01000003.1 Lentilactobacillus buchneri strain S47 NODE_3_length_287627_cov_28.497771, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 50 29 100.0 32 ............................. TGCATTCTCAGGGAATAGTGTTCAAGCCGCTA 111 29 96.6 32 ............................C AAGCGACTGAAAAAGCTAAGAGTACCAGTAAA 172 29 96.6 32 ............................C GACTCCAAAGTCGGACCTCACCAAGAAGCAAT 233 29 96.6 32 ............................C TCCAGGCAGGGATTTGCACCCTACAAGCCTCT 294 29 96.6 33 ............................C CATCAGCTGATTATTTCAGGGTTTGAGACTCTG 356 29 96.6 32 ............................C TTGATCCCGACGTTTCCACCTTTATCAAAAGC 417 29 100.0 32 ............................. AGGAATGGCATATCGCGTCGCATCAATTGAAT 478 29 100.0 32 ............................. AAGGCTGAAACTTACCTGAAGCGATTGATTGA 539 29 96.6 32 ............................C TGGCGCTCGTGTTGGCGAGGTTGCCAATCTCA 600 29 100.0 32 ............................. ATAAGAGTTGGGGGACAGCAGCCTTGCTCTCA 661 29 100.0 32 ............................. GGTAGTCGAGCCACCGGATCCAAATACGATTA 722 29 100.0 32 ............................. CTTCCAAGTGAGGCGGTAAGGAGCATTTTATG 783 29 96.6 32 .......T..................... TACGGTGGCGATCACATTGACCCATACGGCTA 844 29 89.7 32 ...........A.G...........A... TCACGGTGTCCAGATTTTTGCCGGAACTCCCA 905 29 93.1 32 ...........A.G............... GCTCGCGCGGGACCCGGCTTCCCTGGACCCTT GGG [923] 969 29 89.7 0 ........T.....T..G........... | ========== ====== ====== ====== ============================= ================================= ================== 16 29 96.8 32 GTATTCCCCACGTACGTAGGGGTGATCCT # Left flank : TACGTAGGGGTGATCCCAAGCGACTGAAAAAGCTAAGAGTACCAGTAAAG # Right flank : TGCGACTAACGAACTTCAAATGATGGATTCTTAGTATTCCCCACATGTGTGGGGGCTCCTTTCTTGCAAAAAACTATTTTCACAAACGCGTTGGGTTGGCTCCAAAAAGGTGGAACACATTCAGAAAAGTTCAAGACAAAAATTAGCCTCTGATGGCGCAACAGTTGTAACCCGCCGCTCAAGTCCGGCAATAATTCTGCCGAAACTCAAAAATAGCACCTAACCAGTTGGCTTTCACCAACTAGTCAGGTGCTATTAGTATTTTGCGTAACCATCAACCAATTTCAAAACAGATACAATAATTTGAAAATGCCATATAGATTTCGTTTCTAACGATAATTGTCTAACATCTTAAACTTATGGTTGTCTTGGAAATATGCTCCAACCTTTAGCAACAATTTATCATTACCCTTAGCCGCCTCAAATTGAATTCCCAGCGGCATTTTCTGCTTGCTAACATATGTTGGTAAACTGATTGCCGGCTCTCCTGAAAGGTTGGC # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.58, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTACGTAGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3960-4172 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUMV01000003.1 Lentilactobacillus buchneri strain S47 NODE_3_length_287627_cov_28.497771, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3960 29 100.0 32 ............................. ACTTCGAGTTACCAGCCTTACGGATACCGTCA 4021 29 96.6 32 ............................C AAGCATATCAAGTCTTCTCGCGGGAACGCGGG 4082 29 93.1 32 ......T....A................. GATTTGATTCAATCATTTCGTTATCAGATTTG 4143 29 93.1 0 ...........AC................ | G [4161] ========== ====== ====== ====== ============================= ================================ ================== 4 29 95.7 32 GTATTCCCCACGTGTGTAGGGGTGATCCT # Left flank : TGTGCGATTGATTGGTTTTGTTGGTAAAGTTCAAAAGTATTCGTCCAAATTTCTAAAAACCAATGGCTTCATTTATCTGCTTTGGGTTAGTTTGGCAGTGTTAATCATTTCAGCAACATTGTATTCTCTTGCGGAGAACGTTTCGTGGGGTGAATCGTTGTGGTGGGCAGTCGCAACCGCAACGACTGTCGGTTATGGTGATATTTCGCCACATACCCTTGTGGGAAAGATTGCTGCGGTGATGCTGATGATGGTGGGAATTGGGATTATTGGCTCGCTTACGAGTGCGATGACAACGTTCTTTACCAATCGAGACAACGTGGATAATTCGTCCAAGATTTATCGGAAGCTTGAGATGATTGAGTCGGAGAATAGGGATTTGAAGAAGCAATTGGATAAGCTTGAGAGGAAATTGGATAAGTGATTGAATCGCAACTCAAAGTGATGGGAAATGAGTGATTTTTCATTTTAAAACGGCTTGGTTGCGGCGTTTGTTTAGT # Right flank : TTCTCCGCAGGGTGTGCTTTGCTTCATCAGTATCACAGTAAGTGTGGATTGATTCTAAGTATCTAGAAATGTCGAGGTTCAGTACGACTAAATAAATAGTATTGCACTGACTCATTAACTTGGGTCATACCTAATGCTATAAATATTGATAGGAGAACTAGCATGACAACACCAAAAGAGATTTTAGTTGACGGTTTACAAGAATTTGCCAAGAAAGTTGGCGGGAAGAGTCGCAATGGTAAAGAGCTTTTTATTACCAGAACTGCTGTTACGGATCAGCTCACACCAGACGGTAAGCAGTATACATTTATTTCTTTAATTCGAAATGATCAACAAGCTAGTGGTCCGTATTCTGGGATTTCCTTAAAAGTAAATCCGGGTATTAATCATTATCGAATTTCTTTAGATATCGGTAGTGAGGGTTTTGGAGATGACTACCAACTTGTGGCTACCCCTGGTACAAGAAGAAGGTTTGTTGAACTCCAATCTGTGATCAACGA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTGTGTAGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 97573-98666 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUMV01000008.1 Lentilactobacillus buchneri strain S47 NODE_8_length_124562_cov_26.657814, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 97573 36 97.2 31 ................................C... CCCCAATCTTTTGCGCTTTCGTCATTCGCCG 97640 36 100.0 30 .................................... AAACAATTGGGTTGGTTTAATATTGAATTG 97706 36 100.0 30 .................................... TGCAAGAATCAACAGGTTTCAGTCATCGCT 97772 36 100.0 30 .................................... CTTCAGGAAAAGGAATCAGTTCAGCGGTTG 97838 36 100.0 30 .................................... TTCCCGTGCACCTTTTTCGCTGCTGTAAAA 97904 36 100.0 30 .................................... ACGGGGGTGGCTTTTTGTATGCCGCAACCC 97970 36 100.0 30 .................................... CTGAAGATTATTTGCTAATGATATAATATG 98036 36 100.0 30 .................................... ATTGATGGATGGTGGTCAACCATCTGTCTT 98102 36 100.0 30 .................................... TTGGCAGCACAAATCAAAGCATTGACACCG 98168 36 100.0 30 .................................... TATCGAACAATAAAAGGCGGTGTAATTATG 98234 36 100.0 30 .................................... GGAAATCAATTGGAGGGTATTACAATGAAT 98300 36 100.0 30 .................................... CAAATCAAATCTACATACTTCCAAATCATT 98366 36 100.0 30 .................................... ATGGATGAATAAATAGTGTCCATTTTAGAC 98432 36 100.0 30 .................................... TTAATGTATAAGTGGATCCCGAGATTGTGG 98498 36 100.0 31 .................................... ATGACAGTTCTGATGATGATTCAGTTAATGG 98565 36 100.0 30 .................................... CCGACGATCCACTAGCTGTGGAAAATGTGA 98631 36 83.3 0 ...............C........C......G.GAT | ========== ====== ====== ====== ==================================== =============================== ================== 17 36 98.9 30 GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Left flank : CAGCGATGGTGTCAGTGACAAGTATAATTCTGGCATTTTTAAGCAATTAGAGGCTGTGTTGACTGATGATCAGCGTAAATCGATAACTGATATTAATAATCAATTGTATACGGTCGTCCAGCAGTGTTTGTTTATGATCGACTTACCTCTGGAAGTCACTTATGATTGGGATTTAAAGAGGCTGTTTAAATACTGTAAAATTCATTTTAACGCTGATACCATGCTGAATCCTTATGCTATAATTGAATCAATTATCAAAATTCATTTAGAGTGTGGATTGAAGTCGGCTGTTGGTTTAACTAATGTCGCTCATTATCTTAATCAGCAGCAATTAATTGATCTATCCAAGCTCACAAGTTCCGCGGGGATCTCGACATTATTAGTAGAATTCACAGATATGAAGTCACAGGAGCTTTATACCAATTGCGACTTTTACTACATCGACGAGGACTTTGTTGATTGGCATTTATAATGCATTAAAATTCGGTTATAAAAAATCG # Right flank : TGGCTTCTCAACAGATCATTCATTCTGGATCATCTTCCACCACTAAAAAATAAGTTCTCCGCCTAGTATTTGCTAAGCAGGGAACTTATTGTGTTTATTTATTTAACAATTGACTTAGCCAACGCATACCCCAGCTTCTGAGCCGTTTGGGCAGTTGGATGAATCTCATGATCCTTCAAAGTGACATCCTTGTTGCTGTTAGTGATAATGTTGGGTGCGATCTGTTGGAAATTGACCACTTTGGCGCCCATTGACTTGTAGAGCCTTGCTTCAGCTGCCCGCAAGTCGTGGTAGGTGTAGCCATACATATCACTCATGTTGTCACGATTCATGCCATTGGCGTCAAACCGTGAAATTGGCAGGATGCCGTAAATCTTGGCGGACGGATTCAACTTTTGAATCATCTTAATGTTATAGCGCAGGTGGCGCATGACATTCTTCAAACTTCCCGAACCGGAATAGTTGGTGTAATCATTGGTCCCGATATGAACGAAGATGAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 309856-310558 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUMV01000002.1 Lentilactobacillus buchneri strain S47 NODE_2_length_322601_cov_32.944386, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 309856 29 100.0 32 ............................. ACATGGTAGGAAAAGTCTTAGCGGCACACGTT 309917 29 96.6 32 ............................C AGTCTGGAGGACTAAACAATGAAAATAACCAT 309978 29 100.0 32 ............................. AGCGATAACTCTGCTCCAAACCCTTTGGCGTT 310039 29 100.0 32 ............................. CAAGTTCTGGTTTAGAACTTTAGGAGGTGAGC 310100 29 96.6 34 ............................A CCAGATACCGGTGGCACGATGATTCCTCACGATG 310163 29 96.6 32 ............................C GAACGTTTTACCCGCTCGGACAGCTCCGTAAT 310224 29 100.0 32 ............................. AATCTGATTTCGCTGCCCGCCTCAGTAACCCT 310285 29 100.0 32 ............................. AATTTCCGTGTTGGACGGTATGGGATAGGATG 310346 29 100.0 32 ............................. CCTTCTTGGTAATCTCTTTGTATTGCTCAGGA 310407 29 100.0 33 ............................. TCTTGAATCTGTTCATCCCGCTTGGAATCTTTG 310469 29 100.0 32 ............................. CACGGTGATAGATTTACCACGTGATTGGAGCT 310530 29 86.2 0 ...A........C........A......A | ========== ====== ====== ====== ============================= ================================== ================== 12 29 98.0 32 GTATTCCCCACGTACGTAGGGGTGATCCT # Left flank : ACCACCATCTGAATTTCGCTTCAATTCTCGAGAAACCGTTGAACAACTTTTCTGGATCTCCTTGGCGATCGCACACAGTGAGTTTCCATGGCTCCGCATTAAGAATATTGTTTCTCGTTCATCTATGGTAATATGCTGGTAGTGGTTCATGGCTAGTTTCCTTTCATGATTGTTCTCGCAAACATCATTTTACAGGAATTTGGCCATGAGCCATTCTTTATTTAATTAGTGTTGCACTTAAAGTGTAAATTCAAGCTTAAAAGTTAAAAGCTGGACTAAGTCAAAATTGAATTAAACTTTGGCTTAGTCCAGCTTTGCTATAGTTATTCGGCCTTCGAATTCGATAGGTAATCCCTTAGATGCTATACTTAAACAAGAAAATTCTTTACTAAAGAGGTTAAGCTGAACTATTTCATCGATAATATTTTGTCCAGGTTAAAGGTCATTGAAAATGAGTGTTTTGTTATTTTCAAATGGCTCAACGACGGCGTTTGTTTAGT # Right flank : ACAATTACCCCCTTATTACCTACCGTACGGGGGTCAAGCATTTAGTGAGCTTATAAATGAAGTCCACTAGTAGAAAAGGAGGCAAGTGTACTATTTTACTTGTCTCCTTTTTGTAACCGCGAAAGTTCCCAGGGAAAGTTGATAGCCAATCCTAACAGGTGGCCCATCTCCGGAAAAAGCTAACAATAATAATGCCTGTGATGTCACTCACACACTCAAAGAAAGCGCTATAATGAAATTGAATTTTATGCCATAATTTGAATCACTGTTTGCAATCAACTCGGTAGCTAAGATTGTTTCTCAAAGTTCAATTGACCATCCATAAGTGATAATAAGAAACAATATAACCCACCACTAGGAGGCCCACCCAATGCCAACCCTATCAACAAAAGCCACAACCCTCTGGGCCAAAAAGCGCCCAACCGAAAACGGCAAACAACTATGGCTGCCGCTCATTATCCATCTAATCGATACCCAAAACGTCATTAACTACCTCTTCA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTACGTAGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 320410-321108 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUMV01000002.1 Lentilactobacillus buchneri strain S47 NODE_2_length_322601_cov_32.944386, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 320410 29 96.6 32 ............................G ACTATACCGAATCGTTCATGAAAAATCAATAA 320471 29 100.0 32 ............................. ATCCACGCCTTACACCTCTACTTCTTTGGTTT 320532 29 100.0 32 ............................. TACGAACCCAAATCGTCAAAGCATCTGGCATG 320593 29 96.6 32 ............................C CAAACGCGGAAGTCTTCAACGCTAGTGAATCG 320654 29 96.6 32 ............................C ATGTATCAGCACATTGATGGGTTAAGTGGTTA 320715 29 100.0 32 ............................. AGTGAGCGCGATTGTAGACTTCATCCAATCTT 320776 29 93.1 32 ...G...........A............. TAGTCATCGTTTGCGTGTAAGTTGATGTCGCC 320837 29 89.7 32 ...G...........A............C ATACCTGCCCGCCGTTTCCTGGAACGGACCAA 320898 29 96.6 32 ...G......................... CGGATTGAGCTTGTCAAAGAACAACAGGTCAA 320959 29 96.6 32 ...G......................... GTGGTCTTCACTGATGCCAATGATATTTACCT 321020 29 96.6 32 .............A............... CCTTACGAGACCCCGCTCGCTGCTCAGTATGT 321081 28 86.2 0 .............A........GG.-... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 95.7 32 GTATTCCCCACGTGTGTAGGGGTAATCCT # Left flank : ACCAAGGATCGTATTATTTCTATTGCGGCTGTCAAACACAGCGGAGATGGGGATCCTATCAGCTTCCAGCAACTGATTCAAATTGATCAGCCGGTTCCCCATCAGATAACCGAGTTGACGGGGATTTTGTCAGAAATGCTGACTGAACAAGGCGTTAGCTTGGAGTCGGCACTGGCATCGCTACGTGATTTTATTCAACAATTTCCGGTTGTTGGGTATAATTTGCATTTTGATGCATCATTTCTTTCTATGGCTTTCAGGAAGCTTGACCAGCCTGATTTAAGCAATCAGATGGTTGATTTGATGCCGGTGGTTAAAAAGGTTAACCAATTTCTGGATAATTATCGCCTGGAAACCGTGCTTGCAGAATATCACATCAAAAATTCTGACCCCCATCGTGCGTTAGCCGATGCGAAGGCAACTTTGTCCTTAGCGTTGAAGTTGATTGAAAATGGCGATTTGACGATTTGAGAATGGCTTTAGGACGCGGTTTGTTTAGT # Right flank : TCCAATCCAAACCAAACAAAAAACGACTTCACCAACCAAAGGCAAAGCCGTTTTTCAACATCCTCAAAGATCCTTATTTCAAATACATCGCCCGCAACTTAGCAATATCGGTATTCGAAACCCTGAGGCCCTTATTCAAGAAATTATCCATCGTGCCATAATGCTTCTTCACCGCCGAGTAAGTGGCGTTGATGTAAGCAGGTTTGACATCTTCTAGTGCCTTCACTGTCTGGAGTTCCTTTTGAGAGGCGCCACTCTTCTTCAACTGAGCATAATGTTTTTCATAAACCCCCTTGGTTGCCAAATAGTCGTCGACAATCGTCAGCTTCTTGACGCCGAGTGCTGACAAGATGAAAATCGTTCCGGCACCTGCCCGGTCCTTGCCGGCTGAACAATGATACAAGACTGCGGAGTTCCCTTTATTATTCAAAAGAGTGGTGAATAGGTTGTGATAAGCGGTTCGAGCTTGTTTGGTAGTGACAAAATTTGTATAGCCCTGT # Questionable array : NO Score: 5.46 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTGTGTAGGGGTAATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 322330-322601 **** Predicted by CRISPRDetect 2.4 *** >NZ_SUMV01000002.1 Lentilactobacillus buchneri strain S47 NODE_2_length_322601_cov_32.944386, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 322330 29 96.6 32 ............................C TTGCCGATCCACAACCGATGTAAATTCATCAA 322391 29 100.0 32 ............................. AGACAGGTGCAACTAGAGCCGCCGCAAAAATA 322452 29 100.0 32 ............................. GTTCACCCCGAAGTGTTTCAAGGCACTGGCAA 322513 29 96.6 32 ............................C AAGCGACTGAAAAAGCTAAGAGTACCAGTAAA 322574 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= ================================ ================== 5 29 98.0 32 GTATTCCCCACGTACGTAGGGGTGATCCT # Left flank : CTTTTGATCGTTTTTCCATCAGTGGTTCGATACCCGCCCAAGTCTCGGACGTTCATGGCGCCTTTCAAATCAATTTCATGCACTTTGACTCCCTGGGTTGCCACGACCTGGGCATTTGCTGGAGCAACCGATTGGATGGCTGCGCCCGTAGCGGAGAAGACGGCCAGTGCCAGGGATGCAATCAGAACAGATTTTTTCAATGTGATTTCCTCCAAACTTTTTTGATTCAGTGTTTAGTTTACGGGAGGCGTGTAATGATTTTGTTTGCATAAGGTAATGATTTGGTAAATGATGCTTAGCAGATTTTTTGCTGGATACCAGAGGATCGTGAAATAAAATGGTTGATGGAGCTGTACACTATTGGGATAATTAAAACGGCAGAATCGGCTGATTTGTTTCATGCGACTAAATAATTAAGGTCAGATGCTTTCGTATTTGCAAGTCATTGAAAATGAGTGTTTTGTCATTTTCAAATGGCTTAATGGCGGCGTTTCTTTAGT # Right flank : | # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTACGTAGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //