Array 1 441-233 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VIQG01000094.1 Vibrio cholerae strain A110704W4 NODE_157_length_1955_cov_10.760613, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
       440	    28	 100.0	    32	............................	AAACCGTTAAAGCGGCTGGCGGTGCTCTGAAA	
       380	    28	 100.0	    32	............................	TACAGCGTCGGCAGAGCAGCACGACGGAGTAG	
       320	    28	 100.0	    32	............................	TTTCAGCGCTTTGTCGTGCTCCTCTCGCATAC	
       260	    28	  96.4	     0	........................A...	|                               	
==========	======	======	======	============================	================================	==================
         4	    28	  99.1	    32	GTTCACTGCCGCACAGGCAGCTTAGAAA	                                	       

# Left flank :   TGACTGTTCAGGTTATATTTTCTAAAACGTAATACTGCACTAGTGAAACTAGTGCAGTTTCTTTTTGTACTCTTGGGCTTCCCGCAAGGCTATATATTCCCGTAACGCATCAGCTTTTCGACTGTGATCGCGTAGAGCTTTCTTACCTTTTTCAATTTCTTCTCGAACAATAGTTCTTGCATATAGTTCAAATTTCATAATAAATCTCCTATGCCATGAGGCTAGCACGGCATAACAAAGCGTTCAAGAGGGACTTGGCACGCGTGGCATTTTCAATTTGCGGTAAGTTTAGTGGTTAAGGTGTAATGCGGTTACTTTTGCATTGCGTGCCTGCGCCCCTTAACGCGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTGTTGATTTATATTAATAATAAATCGAGTAAAAAATAAAAGGTTATTCTTAGGAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAATTTCATA
# Right flank :  ATATTTATAACTTAGGCATTTGGGATCGGCCAGTTAACAAACGCCTTAAAGGGACTGCCAACGCGCGGCGTTTCCAGTCCCAATGAGCCGCGGTGGTTGCAGTTGTCGTGTTTGAGTTTAGTGGTAATGCGTTGCCAGCCCCTTAGGCGGGCGTTAGTTTCTATCTAGAAAAAATCATCAAAAGTTCAGATTCATGCCCTGAATAATCAGCTTTAAACGTTCAAGTCGCACAA

# Questionable array : NO	 Score: 5.81
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [58.3-78.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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