Array 1 2942140-2938928 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP080452.1 Acinetobacter baumannii strain MRSN 56 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2942139 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 2942079 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 2942019 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 2941959 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 2941899 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 2941839 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 2941779 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 2941719 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 2941659 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 2941599 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 2941539 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 2941479 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 2941419 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 2941359 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 2941299 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 2941239 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 2941179 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 2941119 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 2941059 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 2940999 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 2940939 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 2940879 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 2940819 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 2940759 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 2940699 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 2940639 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 2940579 30 100.0 29 .............................. TTTTCTGTTAACTCTAAAATACCCTTCCG 2940519 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 2940459 30 100.0 29 .............................. GTCTGATCCGACAATTTGGCTGAGTACGT 2940399 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 2940339 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 2940279 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 2940219 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 2940159 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 2940099 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 2940039 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 2939979 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 2939918 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 2939858 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 2939798 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 2939738 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 2939678 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 2939618 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 2939558 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 2939498 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 2939437 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 2939377 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 2939317 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 2939257 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 2939197 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 2939137 30 90.0 29 .......A.....C...T............ GGCGTACGGATAACGGAAGAAAGCATAAG 2939077 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 2939017 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 2938957 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.35, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //