Array 1 203056-203450 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PDEV01000001.1 Rothia dentocariosa strain OG2-2 NODE_1_length_1241720_cov_183.109, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    203056	    29	  82.8	    32	TG.AA....T...................	CGTTTGTCCGGTTACTTCTACATAAAAATTTG	
    203117	    29	 100.0	    32	.............................	TTTGCAGGCACGGAGGTAAAACCATTGAGTTC	
    203178	    29	 100.0	    32	.............................	TGAGAATCAACCACAGTAGCCGCCTGCTCACG	
    203239	    29	  96.6	    32	...........................T.	GTCGAGCCGTGGGTACCGGGGTACCTGAACGC	
    203300	    29	 100.0	    32	.............................	TACACCAGCAAGCTCGCGCAATGCTGTTTTTA	
    203361	    29	  96.6	    32	............................G	AACCCTGAAGAAGCAGCTGCCACACTCTCGCT	
    203422	    29	  72.4	     0	G.T...........T........A.TTTT	|                               	
==========	======	======	======	=============================	================================	==================
         7	    29	  92.6	    32	ATGTTCCCCGCACCCGCGGGGATGAGCCC	                                	       

# Left flank :   GTAGGGGCGAATTGCCGGATCCGCTTCGAGGGCGTTTCGAACCAGTTGTTTGCTCGATAGCACCGCTTCCACTGCTTCCTGCCCCACAGCCAACCAGCTCGGCATTCCGTCAGGCAGAACTACCCGGACACAACCATGTGTTATGCCTGTCTTCTTGTAGATTGTGTCTGCCGATGCAAAGTCACCGTCTCCTAGCTGGACTATAGCTTTGTTTTGCATGCTTTCCCTTTCGGTCCTGCTGTTTATTTGCATTCGGAGTTTCTCAAGTGCTGGTTAGGAGAGGGGAGGGCGCAATGAATTTCTTTTAACCTACTTTTATCGGCTACCTGGAAAATTCAACCAGTAGAACACGTCCTCTAGAAAAGGAAAACAATGGACAACAAGTTGAATCCAGATAATACGAAGGCCTCCGCTTGCCGCATTTACGACACACTTATCGGTGGGGTGAATCTGCAAGAGATAGACAAGAAGTACTACGACACACTTCTTGAGATCAGCCC
# Right flank :  TTCAACCCTATGAGGAATACTCCCTTAAATCTAGTGATGCATATCATGCTTATTGGAGTTGGTGGGGTATTCCCTTAACTGTATAGTTATATATGTTGTTCGGGCGGGTCCCGAAAAAGCAGTCCGGCCCCATCGTATAGCGGCCTAGTACTCCGCCCTCTCACGGCGGCAACACCGGTTCAAATCCGGTTGGGGTCACACTAGGGAAAAGAGAATTCCCCGGTTCGCCTGAACCGGGGAATTCTCTTTATCTTTATAAATGCCAAGAGGTCAGGATTTTCTAAAAGGCACTTATATAACCTTTTCATCAAAACCTACCCTGCTCGCATCATAATGTGAATAACTAGAAGCGGGGAAGCAGCCTACTTATTCTCCCCGCCCGTACTCGCAGACCCTTGCGCACTGGCAGAAGCACCCGCTGCGGCAGGAGCACGGTGCACCATACGCCACGTTCCCTCAAGATAATGAGCCGTCACCTGACCCGAGACAGCCCCGCTCGG

# Questionable array : NO	 Score: 5.74
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATGTTCCCCGCACCCGCGGGGATGAGCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [4,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [5-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.27   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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