Array 1 24125-24540 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH932294.1 Bergeyella zoohelcum ATCC 43767 supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 24125 29 100.0 35 ............................. TGAAAAAAACACCGCACGAAAAAACGCTTTTTATC 24189 29 100.0 36 ............................. TGACATGTCTTCCGTAGATGGAAGAGCTATCTCAGA 24254 29 100.0 36 ............................. TCTCTCCATTTGGCTAATGTTTTTGCACTAATGCCA 24319 29 100.0 36 ............................. TTAGATTAGGTAACTCACCACTCTTACTTAACTTTC 24384 29 100.0 36 ............................. CTAATTACCTTTACACCACTTTAGATTAAAGTGGTG 24449 29 100.0 34 ............................. TCAAAGAAACCATGCCCTTTGTAGCTGATAATCC 24512 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ==================================== ================== 7 29 100.0 36 ATTCTAATCGCACCATAAGGAATTGAAAC # Left flank : AATATTTCATCTTTTAATTTAATGCTTATGCACATCATATTAGTTTATGACATTAGTGGCAATAAATCTGTAAAAATGCTTAAGCTATGCCGCAGATATCTGAATTGGGTTCAGAATAGTGTCTTTGAAGGAGAGATTACAGAAGCTAAACTGAATCAGTTAATTGCACAGATCCATAGAATCATTAATAAAGAGTTAGACTGTGTCATTATTTATAGTTCCCGCCATTCCAGCTGGGCGGAACGGAAAGTACTGGGCATAGAACAGAATCCCATTAAGAATATTTTGTAATTGTCGTCTATCTATTGTAAATTTGTGGGATAAAGATGTTCTTTGACATTCCGAAAAACATAACACACGCACAGCCAATGAGATAAAACACCGTCTATCTCCTTAGTTTTTAGAGTAAAATAAGACCGACGATTTTTTAAAAAAAATAGACTCCAAAAATCACGAAAACATTAGGGGTTTTCAGTCTTTTTTACCTACTTTTGTAACCT # Right flank : | # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCTAATCGCACCATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 1 2436-4080 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH932293.1 Bergeyella zoohelcum ATCC 43767 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 2436 29 100.0 35 ............................. TGAAAAAAACACCGCACGAAAAAACGCTTTTTATC 2500 29 100.0 36 ............................. TGACATGTCTTCCGTAGATGGAAGAGCTATCTCAGA 2565 29 100.0 36 ............................. TCTCTCCATTTGGCTAATGTTTTTGCACTAATGCCA 2630 29 100.0 36 ............................. TTAGATTAGGTAACTCACCACTCTTACTTAACTTTC 2695 29 100.0 36 ............................. CTAATTACCTTTACACCACTTTAGATTAAAGTGGTG 2760 29 100.0 35 ............................. CTCTCTTAGTACTATTCATTATACTATTCCATTCA 2824 29 100.0 35 ............................. TTTTCTAAGAGTTCCCGTTGTTTTTGTTGGTTATA 2888 29 100.0 36 ............................. TAATCCGCCTCCTTTTGCTCCATTCTTTGTAGGAAT 2953 29 100.0 35 ............................. TCATCTGCAAACTTCCGAGCCTTGTAGATATTGAA 3017 29 100.0 36 ............................. TCCGTAGCCGCTACACTATCATTGCCCATTAGCTTT 3082 29 96.6 36 T............................ CCCAAAGCGGTGAAATTATCCGCATCTACTATTCCC 3147 29 100.0 36 ............................. TTCTTTTACTTTCTTCTCTGAGTTTCATTTTTTTTC 3212 29 100.0 36 ............................. TTAGATAGAGACTTTAAGAGCTTCTTTGCGGACTCA 3277 29 100.0 36 ............................. ACTTTTCGGGCTAATTTCTTAAATCTGTTCATCTTT 3342 29 100.0 36 ............................. ATTACCCCCTCTTTTAATTGCTCAGCACTTGCTGGG 3407 29 100.0 34 ............................. TCAAAGAAACCATGCCCTTTGTAGCTGATAATCC 3470 29 100.0 36 ............................. AGTTGCCATTCTCATCTTTTTTAATGCTGAAAAATG 3535 29 100.0 36 ............................. ACTTTTCGGGCTAATTTCTTAAATCTGTTCATCTTT 3600 29 100.0 35 ............................. GACGATAAACTGCGTTATATTGTTTCTTTTTGTTC 3664 29 96.6 35 ..........T.................. CAAAATCCCATAACTCAATAAAATATTGCCTTATA 3728 29 100.0 35 ............................. AACAACTCATCTCTTTTCTTTAAAAATTCTATACA 3792 29 100.0 36 ............................. ATTGATAAAATTCCACTTCATCGATGAAATTTCCAT 3857 29 96.6 36 .............T............... AGAGTAGCTAAAAGTTGATTAAAATTCTTTATCTTT 3922 29 100.0 36 ............................. TGCAGTCCGTTATGTAGGAGAGCTTTATTCTGCATT 3987 29 100.0 36 ............................. AAAATGATGCTTTTTTCTTCGGGATATTTCTCAAAC 4052 29 82.8 0 ........................CTCTT | ========== ====== ====== ====== ============================= ==================================== ================== 26 29 98.9 36 ATTCTAATCGCACCATAAGGAATTGAAAC # Left flank : AATATTTCATCTTTTAATTTAATGCTTATGCACATCATATTAGTTTATGACATTAGTGGCAATAAATCTGTAAAAATGCTTAAGCTATGCCGCAGATATCTGAATTGGGTTCAGAATAGTGTCTTTGAAGGAGAGATTACAGAAGCTAAACTGAATCAGTTAATTGCACAGATCCATAGAATCATTAATAAAGAGTTAGACTGTGTCATTATTTATAGTTCCCGCCATTCCAGCTGGGCGGAACGGAAAGTACTGGGCATAGAACAGAATCCCATTAAGAATATTTTGTAATTGTCGTCTATCTATTGTAAATTTGTGGGATAAAGATGTTCTTTGACATTCCGAAAAACATAACACACGCACAGCCAATGAGATAAAACACCGTCTATCTCCTTAGTTTTTAGAGTAAAATAAGACCGACGATTTTTTAAAAAAAATAGACTCCAAAAATCACGAAAACATTAGGGGTTTTCAGTCTTTTTTACCTACTTTTGTAACCT # Right flank : TCTTTCGGAGTGGGTTCGGGAGGAAAAATAGAACAATTAAAAAACGGTGATTAAAATCAAATCTCGAACTACTCAAAAAAAATCAAATGCTAAATGACGGAGGGCGAATAGTGGTGGCAATTAGCGAATAACGAGGAGTAAAACGATTCAAAACACGCAAACATTAAACTCCTATTATTCCCCAATTAATGCATGAAGTTATTAGTGGATTAGATTCATTCCATGAAAAAAAGCCATCGTACTAAAATGTTTAGTACGATGGCTTTTTTTACGGGATATAACGGGTTATTTCTTAGGTTTCCATTGGCTAAAGAAGTGTGCTACTTTATCTACATCGTAGCTTTTATCAGCCTCTAAGCTACCACTTTCCTGAATGTGGAGTAGCTTCCCTGCAGCATCTATAACGATGAACACTGGGTAACCATGTTTTTTTCCTGGGTCTCCATATTTGGCAAATACCGCTTCGTTTTTATTTTCTTTGGAATAATTCAGATGATAGT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCTAATCGCACCATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //