Array 1 21883-21464 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCMP010000011.1 Bacillus cytotoxicus strain CH_213 contig00011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 21882 29 100.0 35 ............................. TCAATGACCGCTTAACGTTCGCTGTAGCTTTAAGG 21818 29 100.0 36 ............................. AAATTCATGATGTGGAAAGCTGCGAGACCAAAAAAG 21753 29 100.0 37 ............................. TCATGGAGGTAAACACACATACAGGTAACGACCAAAA 21687 29 100.0 35 ............................. GTGACCCTGTTGGTCTCGTTCTGTTACAAAACGCG 21623 29 100.0 36 ............................. GTTATTTTTTGATAGTCTTCAGCACATACCATTCGC 21558 29 100.0 37 ............................. ACAGCAAAAATTATGATTCACAATGCTTCTATGTGGA 21492 29 93.1 0 ....................A...G.... | ========== ====== ====== ====== ============================= ===================================== ================== 7 29 99.0 36 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : TGGTGGTAAAAAAATGTTTGTTATAATTACTTATGATATTGGAGAAAAAAGAGTAGGAAAAGCGTGCAAGAAATTAAAACAGTATTTAACTTGGACGCAAAACTCTGTTTTTGAAGGAGAATTATCTAGGACACAACTCTTAAAATGCTTAGCTGAATTAGATCAGATTATAATATCGAGTGAGGATTCTATTTACTTATATGAAGTAAATAATCCACGTAATATAAAGAAAAAGGTATTTGGTATTGAGAAAAGTTACGAAGAGCTATTTCTCTAAACACGATTTTATAATATATTAGGAGTAGTTTTTTTCTTATTAGTGAGAAGTTTGCAGTGCATCGTTTTTTAGCGAGTAAACTGCCAACCTCTTGTCTGTTAAAGGATGGAGCGTATTTTTGAAAATACTTTTGAAACACGACTCAACATCCGCTGCAAGATTTGGAAGTCTTAATGTAATGTGTTCCTTGATTTAAAAGGGATTATAGTGTTTTTTTATAGGG # Right flank : GCAGTTTTCTTATGGTTAAATAACCCATGGAAACAAAATTAGTCGCCATTTATGCTTATCTGAGCGGTATAGAACCTTTTAAAATAGTGGCTAGTTTTTTAGAAAAGAAAGAAGTTATCGTGAACGAAACTAGCTCCTTACCCGTAATTTCGTAGGTTAATTTGGTTACACTGAATAACTATAAAAAACAAACCAAATCAGAGCTACATTACGAAAGGAGCTAGTTTATTATGAAGGATACCACAAAATACGTAGGTTTAGACGTTTCAAAGGAAAAAATTGCTGTTGCTATCGCGGATGAAGGAAGAGAAGAACCTAGATATTTAGGAATGATCCCTCATACACCTGAATCTCTAAGAAAGCTGATAAAAAATTAGGTGCCGTTGAACACCTAAAAGCATGCTATGAGGCTGGTTCAACTGGCTATGGGATTTACCGCTTACTTTTCAGCTTAGGAGTAGATTGCGCAGTGATAGCTCCCTAAAAACCTGGAAATCGTG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 31719-31163 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCMP010000011.1 Bacillus cytotoxicus strain CH_213 contig00011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 31718 29 100.0 38 ............................. CACGATACCGCGTGCAAAGTCTTCTACACTACGCGCGT 31651 29 100.0 36 ............................. TGATCCGTGCGCTACCATTTCCGCTTGGTCGCACGA 31586 29 100.0 37 ............................. CTTAAGAAAGGAATATTGATTATTGAAAAATGGTTCA 31520 29 100.0 37 ............................. GGAAACGTCTCTGTTTTAGACGACACTAATTTCAGTG 31454 29 100.0 36 ............................. ACGGTTTGCAATGCACCACCAACGCCACCAACACGG 31389 29 100.0 36 ............................. GGGATGTTTTTCTTTGCAATCGCTCCGTGAAATCCT 31324 29 100.0 37 ............................. TTGACTGAGCGTTCAAGAAAGTAGCATGTTTGTCCCA 31258 29 96.6 36 ............................T CCAATGTATTCAATGGTTTTTGGACATTGTTAGAAA 31193 28 93.1 0 ....................-.......A | AGA [31167] ========== ====== ====== ====== ============================= ====================================== ================== 9 29 98.9 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : CGTTCTTGTGAAAAAGGTAAGAAGAGGAGACGAAGAAGTCGTTATTATGATTCGCTGGGAATCTGAAGAAGCATGGAAAAATTGGGAGACAAGCGAAGAACATTTGGCTGGTCATCGTGCAAATCGCGGAAAACCAAAGCCAGAACATATTTTAAATGCTGAACATGCTGTTTATTATGTGAAAGCAACGAAATCGGCTTATCAGCAATCATAATGTGGATGAAAAGGGGGCGATTTAGCCCTTTTTTTAATGATTAAAGAATTCTTTTCTTAAATGTAGTTTTGTATTATATTAGAAAATAAGAGTGTACCTATACCAATACTCATTTTGCAGCATATCAATTTTTGAAAGAAAGGAGTCAAAACCCTTATGTTTCAAGGGATAGACTTTATTTTTGAAAATGCATATGAAACAAAACTAACAGTGTGCTGCAAAACTTTCAGTGTATTATATAATAAATGTATTGATTTTAAAGAGAATTATGGTGATTTTTTATAGG # Right flank : AGCTTCAGATGATAATAGTCCTTCTAGGGCATAGCTATCAACTTTAGAGAAGTGCTTCCCCTAAAAAAGTATCGGGACACTTTTTTGTAATCTTTGAATGCAATCCTGGATTTTGGGTATATTCAAATAGAACTTCCTATGATATATATTTTATGGCGCTATTTGAAGCCGATTCGCTGATTTTTCTATGTTTTGTTTACTGATAGCTTGAAAGAGGTTGCTAAGCACTAAAACAGGGGGGGGAAGTACAAAAAAGTTGCGGTGTATATTTTTTTGATAGATTTGCACCATATAAGCATATTTCAACTTACTCATTTTTTCCTTGTGTCTCTCATAAAGGTCTTTGTAGTTGATAGGTGTAACGCTTGCAAATAAACATAAACGCAAGGAGTATAAATTTATTTTAAATAGAAGTTCTATTTGCTGTCGTAATGAATAAAAAGCATACACTTCTGTGAGAGGATACTGAAAAATGGTGGTTTTGAAAAATAACACGCATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //