Array 1 71835-71278 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYXX01000014.1 Roseburia inulinivorans strain 2789STDY5608887, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 71834 33 100.0 33 ................................. TCCTCAATAAACTGATTCCGAATAATCTCATCC 71768 33 100.0 32 ................................. GATTTTCTTTTCTAATCTCGTCATAATAAGGA 71703 33 97.0 34 ................................T GACCACATTTCCAGCAATAACGAGCAGGAAACAT 71636 33 100.0 32 ................................. ATCTTCTTCTGTCGGATCTCAATTACCTCCAT 71571 33 100.0 32 ................................. TAGGTATCCTCAAACATTAACGCCAGATTCTG 71506 33 100.0 32 ................................. TAGATGTGACGATGCAACATCTCACTGCCGCT 71441 33 100.0 32 ................................. ATCTGACATTTGCAGTCAATAATCCATATGGA 71376 33 100.0 33 ................................. AAAATTCTATAATGCATATAAAAGTGGATTAGC 71310 33 90.9 0 ............................T.T.C | ========== ====== ====== ====== ================================= ================================== ================== 9 33 98.7 33 GTCGCTCCTCTTGTAGGAGCGTGGATTGAAATA # Left flank : CATTGATGCATATCCGCCATTTTTGTGGAAATAGAGGTGATATTTTGCTTGTATTGATTACATATGATGTTAATACAGAAAATGAAGCAGGAAAGAGCAGACTTCGTAAAGTAGCAAAACAATGTGTAAACTATGGAGTACGAGTACAAAATTCTGTTTTTGAATGTATTGTAGATGGTGCCCAGTGTCGCATGCTGAAAGGAAAACTACAGGAAATTATAGACGAAGAAAAAGACAGCATTCGTATTTATTATTTAAACGATAAACAAAAACAGAAAATAGAATGTCTGGGTGTAAAAAAAGGAATATCAGTAGAAAATACGCTGATATTTTAAAGCGGTGCGGATCATAAGCGAACATGAAAAAGCGGATGATTCGCACCGGAAAAATGCAATATTTTTTGTGTTGCATAAAATAATTATTGCGGTTTTGATGGAATTATATAGACACTATGCAATAATTATTGCAGAGATGCATAAGGAATATTGTGCATTTTTGCT # Right flank : CTAATAGGAAAGGTAGGACTTTTTCTTATGTTGTTAATTAACATACTTTGACGTTAAAAAATATCTGTCAAATAAAGCTATTTATATGATATCATAGATATTATAAAGAAATCTTATTTGATGCTTTTACATAGTTTTCAGTCAAATGACGTAATTTGTCAGAGACGGTACACATTTACAATTTGGAAGGATGAGTAAGTATTATTCGATAGTTGAGAATAATAGGGCAGTAGCTTGGCGAAAAGATAATAATTATCATTGTTTATAGGAGAATGCCATATATGAAAAAAGTGGGAAGTTATGCATTGCTAATCAGTATGCTATCAGGATGCAGCCAACAAAATACAGTGAATCAAACTGAAAGTGAGGTATCAGAAGCACAAATGCAGGAGAATAGCGAAAATATAGAAACAGAAAAAATGCAGGATACAGAAAAGATCCAGAATACAGAGAAAATCCAAGATACAGAAAAAAATGAAAACACAGAGAAGCTAGCTCCT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCTTGTAGGAGCGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 2 80886-80456 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYXX01000014.1 Roseburia inulinivorans strain 2789STDY5608887, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 80885 36 97.2 30 .T.................................. GTACACACGGTTACAAGAAGAGAGACAGAA 80819 36 100.0 30 .................................... AAACCTCGTTCGAACTGTCCTTGCCATTGT 80753 36 100.0 30 .................................... TTTGTTCCGTGTGGGTTCTGTGTTATGTAG 80687 36 100.0 29 .................................... TCAAGAGTGGTTAATAGTCCTATTGATAT 80622 36 100.0 29 .................................... AGAACCAGAACCAGAACCAGAACATGATA 80557 36 100.0 30 .................................... AATGAAAAATCCATTCTGTAATCTCCTACG 80491 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 99.6 30 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT # Left flank : CAGATGCACTTTACAAGAAAGGATATCCGTTATATTTCTATAAAAATGAGACAACCAAGAGAAAAATTGATGTTATGATCCAAAAAGATGGTGTGGTAGTTCCGATTGAGGTTAAAAGTGGAAATACGCGGGCTAATTCCTTAAAATCTATTTTGAAAATGAATGCAGACATTCCTTATGGATACAAGTTTGTTGATGGTAATATAGGTGTAAGTGATGATGGTATCATTACATTACCGTTATATATGATCGCGTTTATTTAAAGTATTATTTTTTTGACTTTGTGATATATTATTTTTAGAAGCTGTACCATTAAGCGTTTCGGACGTTTGCGAGAAGATGTCTACATCACTTGGCGTAATGGCAAGGCTTTTTCTTTTTCCTGAATACATAGTCTGTATTCTTAAATCATGATGTTTACTTTGAACATATGTTACTAATGTTTTTTCCATTTATATTTTTTTAAAAATATTATCACTGGATTCCCATAATACATTGTA # Right flank : AGGGAACGGAAACCCCTGCATAATCCAAATGATTATGCAGGGGTTTAACTTTCAAAAAACAAATAAAAAATGATTATAGTAGACGGAAAAAACACATTTTAAGAAAAAATCAAGAAATATGAAAAGCATTTTCCACTATATCCCTAAACAAAGCCGTACTTGCCTTACTCGGGCATACGGCTTTTCGCTTTATATCTATGCTACCTATTAAAAGGCCTTATTTTGATACTCGTTTTTAATAGCGGAAATGTTCTAAGCAATTCATTATTGAATATTTTCGATGTGTAACCATAGTTCTAACTTCTGTGGTTTAAATATTTAAATAGCAATTTTTTGTTGATTTAAATTAAAATGTACAAATTATTGGACAGTTAAAGTGCTATATCTTCAGTAATGAAAAATCAGCAGGGAAAACCCTGCTGAAGGAGAACAATATTCTCCATATTATATTTTCAATCCGCGTAGTAAAATACGACAATCTTTATTATAAATAATAACGT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //