Array 1 286097-286782 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMM01000002.1 Enterococcus sp. 9E7_DIV0242 scaffold00002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 286097 30 100.0 35 .............................. TCCTCATTGTACCCTGACATTTCAAGTGAGATAGC 286162 30 100.0 36 .............................. GAGTGTAAGTATTGTAACAAAGTAGATATTGAGAAT 286228 30 100.0 36 .............................. GTTCCTTAGACATGTTCATTACACTCGCCTGTTCTC 286294 30 100.0 35 .............................. TATAGCAGCAACCATCAAGGAATTGCTGACTTTAT 286359 30 100.0 36 .............................. GATTTTCAAGGGACTCTGTGGGATGGTCGATCAATC 286425 30 100.0 35 .............................. GTAGACCGTCGTTCAGTTCTTGTTGCCGGCGAGAC 286490 30 100.0 36 .............................. CTTGCCATCCCTCCTTAGAAATCGCCAAGCTCGATT 286556 30 100.0 36 .............................. TTATTTGAAACCTGATAATTAAATAAGGTTTTTCCG 286622 30 100.0 35 .............................. TCTTACATCAAAAGCCAAGAACGTATTTTCAAAGT 286687 30 83.3 36 ..T..............A......A.GC.. GAAAGCATCGGTTTTCCGGTGTTTTTTTGTTTTCTC 286753 30 86.7 0 ............G...T.C..........C | ========== ====== ====== ====== ============================== ==================================== ================== 11 30 97.3 36 GTCTTAATCTAAACAACGTGTAATGTAAAT # Left flank : AAAAGAGTATGAAGGGTTTAAAATCTGGTGGTAGCCCATGTATATTATCTTGATTTATGACATTCCTTTAGAGAATAAGGGAGCACGAGTATCTCGTAATGTTTTCAAAATCTGTAAAAAGTATCTCTCACATGTACAAAAGTCTGTGTTTGAGGGGGAGCTTAGTTTGGGTTTATTGAAACAACTAGAAGCTGAGTTAGCTGAATGGATCAGAACAGATACTGATTCTATCATCGTTTTTAAGAGCCGTAATAAACGTTGGTTGGAAAAAGAGTTTTGGGGAGCAGAAGATGATTTGACTTCCAATTTCTTCTAAAAAATCTATCTGTCGACCTGTGGTAATGTAAAAAGACTGGGAGATCGACAGATAGAAAAAATCCCGTGGTTATTGACTTTCTATAGTTTTGTCCCGTAAAATGATTCGTATGAGAAGTGAAAAGTATGGGGTCGACAGAATACCCTCTACAAACCCTTATGTAGCAAGGGCTAAAATAGGGTGG # Right flank : CATTCACGATTAAGAAGCCACCTCTCCATTAATAATGATTTCTCCGCTAAACAGTAGACTATGTAAATTAAGAAATAGCAAGCTCTCCAGTTGTCAATGGTTCTTTATTTAGATGATTACTTGAAAAATCAATATCATCTAAAAATTAAGAAAACATTAAGAAAAAACTATGTCTGTTTATTATATTTCATTTGTGTTACAATTATTTCGAAAGAGTGACTTAGTTGTTTCGTTAATATAAAGGGATTAGATGAAAGAGTAAGATTGTTGGGTGGAGTATTTTGGTCAGTTTTTATGTAGTAACAATATGAGGCTATTTTATAGGATGGAATTGGCTAATATGGACACATTGGCTCTGAGCTTGAAGTGAGTTATGTTGAGTAAGAATTTCGATAGTATCTTTAGAAAAATAGGTTAGTTTATAGGAATAATGAAATTAAAAGAAGCCATCATGTTTTTTATTTCTGTTTTGTTACAAAAATTTCTTTTAAGTAATATAG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCTAAACAACGTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 817275-816919 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMM01000001.1 Enterococcus sp. 9E7_DIV0242 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 817274 30 96.7 35 .................A............ GCAGCTAATGCAATAATAAGCATTCCAGCATACAT 817209 30 96.7 36 .................A............ ACGGGTGTCTCTAAACAGTGGATTAGAAGATATTTT 817143 30 100.0 34 .............................. ACGAAAAACGTTTATTTCGAGCTACATACTCCTC 817079 30 100.0 35 .............................. ACATCAGCATGTCCCAACCTTGCTGAAATCGTGTG 817014 30 100.0 36 .............................. GTTTTAGCTGTAATCTCTAACTGGTTGTCCTCCGAG 816948 30 90.0 0 .............T.TT............. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 97.2 35 GTTCTAATCTAAACAGAGTGTAATGTAAAT # Left flank : ATTTGGGTGTGATTTTGGATGCAACCAACTTGATCACAGCAGATAATTACAAAGATCAAACAAAGATTCTGCAAGAAGCGTTTGACCTTTTCGGTGAAAAAATTGTAGCCATTCATTTGAAGGATTTTGTGATAGAAGAGGGGAAGATCGTTCCAACTGCTGTTGGTGAAGGTTTGATGGATGTCAAAGGCATGTTGGACATTATCAATAAGAACAAGCCTTTGATCAACATTGTGTTGGAAGAAACGAAAGATGAGAAAATCGCTCAAGCGAAGAAACTGATCGAGACATTGTAAGAAGGAAATGATTTTGAGAATAACATATCTGTCGAACTCCAATCGTGTAAAAATACGGGGAGATCGACAGATAGAAAAAAGCTTGATAGCATTGACTTTTGCTCAATTGATTGGATAAAATAAGTTAAGAAGAAGAGAAATAATGAGGGGTCGACAGAAATGGCCCCTCAATCCCTTGCTACACAAGGGAGAAAATGGAGTGGG # Right flank : TCCACTACGATATCGTCTTTTACTTCCGGACTTCGTTTTTTTCTAAGCAAAGTGTACAAGCATAAAAACGAATAAAAAACGAGCCTTGCATTTTTTCGATGCAAGGCTCGTTTACGTATTTTAAACTAATTCAAATGAGGCTTCCAGTGTATCTTGACTATTTGGACCAACGAAAACAAGGAATGTGCCATTCTCGACAGCGTAGTGCATTGAGCGAGTATAATAATTTAATTCGTCTCTAGTTAATGTGAATGATACAGTAGTTGTGCTGTTTCCGGCTACTGTTATTTTCTTGAATTGTTTTAATTCCTTAACAGGTCGAACAACTGAACCGACAACATCTTGGATATAAAGCTGGACGGTTTCCAAGCAATCTCTTGTGGAGTTGTTCTTGATTTGTACGCTGATAGTTAGCTCGTCGGTCATTATTGTATCACTCACTGTCAGCTCAGTGTATTGAATATCACTGTAGCTCAGTCCATAACCAAATGGGAAAAGTG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAATCTAAACAGAGTGTAATGTAAAT # Alternate repeat : GTTCTAATCTAAACAGAATGTAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 108822-108060 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMM01000008.1 Enterococcus sp. 9E7_DIV0242 scaffold00008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 108821 36 100.0 30 .................................... AGTTGCTAGAGTTTCATTCACTTCTGATAC 108755 36 100.0 30 .................................... TATCAAAGAAAGTCAAAAGAGAACTAATGA 108689 36 100.0 30 .................................... AATGTTGTATCTGTTACCATCATTCCGACG 108623 36 100.0 30 .................................... AGGCGTTACAACAACAATTGTAACAACTGA 108557 36 100.0 30 .................................... AGTTTTTAATAGATGAAGACCCAAACAAAT 108491 36 100.0 30 .................................... AAAGGAAGTCGTCATGTATCCCCTTTTTAC 108425 36 100.0 30 .................................... ATTTAAAAGCGATTTTCTTTTGAATTTGCT 108359 36 100.0 30 .................................... ATCAAATGCGGCTACAATGTTCTTAACTGC 108293 36 100.0 30 .................................... AACTAAATATAAATTTTTGTCCATATTGTT 108227 36 100.0 30 .................................... ATACTTTTCTTAGCTTGTTCCAAAATACCT 108161 36 100.0 30 .................................... TTTTTACGCTTCAGTTGAGTGTGTGCAACG 108095 36 80.6 0 .........T....T........C..T.A.....TA | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 98.4 30 GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Left flank : AAACATGACAAAAAACACGAACGAATAATCAACCGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACTGCAAAAAATTCAAGTAACTGATACGACAAGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACGACTATGTAAAAGGTAATTTTAATGAGGAAGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACCAAAACAACGGCTATACGTTGAATTGGAACGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACTTGACTGAACTCTTCTTTGTCCTTTATAGTGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACAGTTGCTAGAGTTTCATTCACTTCTGATACGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : AGCCTGATGATGAATTTTTAAGTTTGCTTTTACAAAGTCAGTTGTGTTCCTTTAGTTGATTAGAAAGGCGGTCGATCGGATGGATTCTTTTTCTTTTGTTCTGAATAATACACCTTGGCAGCGAGCAGCCAGCTGTTTTGTTCGTATGACGGTTTTTGTGTTGGAGAGACATATCCCCATTCAAGATGAGTTTGATGAAAATGATGGGGATGGGACGACGTATGCAGTAGCGTATGAAGGCGAGCTTCCTGTAGCCACAGCCAGATTTACAAAAGTAGCGGATGGCTTCGCTAAAATCACCCGGGTGGCAACGATAAAAGACTATAGAGGCTATCATTTAGGCTCAAAGCTGATTCAATTGATGGAGGAATACGCTGCTTCCGAAGGGATAGAAAAGCTAGATATCCATTCTGAGTTGACTGCTGTCGAATTTTACAAGAAAAACGGATATGTGCTGTCATCAGAAGTCTATCTTGAAGACGGGGTTGAATGTCAGACGC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 2 109816-108922 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMM01000008.1 Enterococcus sp. 9E7_DIV0242 scaffold00008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 109815 36 100.0 30 .................................... GAATGAGTTCATTAATGCAGCTATTGCATC 109749 36 100.0 30 .................................... TCCGTTTCTCATGGATTGAGCTAACCAATA 109683 36 100.0 30 .................................... TATGCTTCTTATTGACGTTGTACGTTGCTA 109617 36 100.0 30 .................................... TCTCCTTCTCTTTATCTTATATATGTAGTA 109551 36 100.0 30 .................................... CAGGATTTCTTCGCCGTTATAGTTATCCAT 109485 36 100.0 30 .................................... TTGTATAACGTCTTCCAGAACTTCCGCCAC 109419 36 100.0 30 .................................... GTAGCAAGAAGTTAGTAGCACAGGTTAAAC 109353 36 100.0 30 .................................... ATGACAAAAAACACGAACGAATAATCAACC 109287 36 100.0 30 .................................... TGCAAAAAATTCAAGTAACTGATACGACAA 109221 36 100.0 30 .................................... GACTATGTAAAAGGTAATTTTAATGAGGAA 109155 36 100.0 30 .................................... CAAAACAACGGCTATACGTTGAATTGGAAC 109089 36 100.0 30 .................................... TTGACTGAACTCTTCTTTGTCCTTTATAGT 109023 36 100.0 30 .................................... AGTTGCTAGAGTTTCATTCACTTCTGATAC 108957 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 14 36 100.0 30 GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Left flank : ATCGATAAATTGACTGCAACAATTAGTGAATTGATTGGCTATGAGCTGTTAGAACATGAACTTGATTTAGAAGAAGATGAAATTACTGTACTGGAATTGTTTAAAGCCTTGGGAATTAAAATCGAAACACAGAGTGATACAATTTTCGAAAAGCTTATTGAAATCATACAGGTGTACAAGTACTTATCAAAGAAACATCTGTTGGTACTGGTAAATAGCTGTGCATATTTGACAACTGATGAACTAGTGGAGTTGAAGGAATATATTTCCCTATGTAATATGGATGTACTATTTATAGAGCCTAGAAAAATAACTGTGGGACCGCAGTATATTTTAGATGAAGACTATTTTTTACATGTGGAAGAAATGGTATAATAGATGTATGTACATTGATAACTGAATAAATAGAAATACCTAATAAAGAAGCGTTCAAAGCAAAAATCTTGCTATGGATGAGTGGCGCGATTACGGGATTTGGCAGAAATAAAAAATTCTGCGAG # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACAGTTGCTAGAGTTTCATTCACTTCTGATACGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACTATCAAAGAAAGTCAAAAGAGAACTAATGAGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACAATGTTGTATCTGTTACCATCATTCCGACGGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACAGGCGTTACAACAACAATTGTAACAACTGAGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACAGTTTTTAATAGATGAAGACCCAAACAAATGTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAACAAAGGAAGTCGTCATGTATCCCCTTTTTACGTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 122690-123639 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMM01000003.1 Enterococcus sp. 9E7_DIV0242 scaffold00003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 122690 30 100.0 36 .............................. TAGAATCAAAGTCAGGAGTATTTACCCCTTTGACCT 122756 30 100.0 36 .............................. GTAGTCCAAGCTTGTTCAATTTCATCTCTACTGATT 122822 30 100.0 35 .............................. GTCTGTAGAGTGTAGGGGGGTGTTACTAGACCCCC 122887 30 100.0 36 .............................. ATGTACAGTGTTTGCCCTGTAAGCTCACTTTGTGAC 122953 30 100.0 35 .............................. CCCATTAGGTATAATGTACCAGTATAGGTAACCAT 123018 30 100.0 36 .............................. ACATTAGATTCTACATTGGCTTTTATGAAGCAGACC 123084 30 100.0 36 .............................. AGTGAAATGAGCTATGAGCAATTAATTGAGCAGAGC 123150 30 100.0 35 .............................. GAGATAGGTAAACACCTAGAGTACCACGAAGCCAT 123215 30 100.0 36 .............................. ATTATTTGTGAAATCGAACTTTCTAAACGTGGTTAT 123281 30 96.7 36 ..T........................... TCCCATACTACAACATCAATATTGAAGTCTTTTAAC 123347 30 100.0 36 .............................. GTAGATGCGTTCAACTGTGGCGGTAACTGCGTGAAT 123413 30 100.0 35 .............................. GCTGATTGAACACGCGACAGCAGCACAAGACGCGC 123478 30 96.7 36 .........C.................... GGTCCTTAGTAGCCACGCTGATCACCAGGGCAGTCA 123544 30 90.0 36 ...............A....C........A TCATTAGCTCGCCTCTGTGTTCCTCGTGTTCTACAG 123610 30 70.0 0 A..............ATT.T.CT..A...G | ========== ====== ====== ====== ============================== ==================================== ================== 15 30 96.9 36 GTCTTAATCTAAACAGAGTGTAATGTAAAT # Left flank : ATCAAAGCTGACGTTAAAAAAGGTCAGCAAAGGGATTCAGGAGTTGAATGAGCCCTTTTCAACAAAGGATTTAGCAGCGAAAATTAGTCTTTCAAGAATTTCCACAAAAAAATACTTGCAGTTTTTGGTTGATTGTCAGGCACTGAAGGAAACCATGATTTACTTGGAAATCGGACGTCCGTTGACAAAATATGAAATTGCTAGAGGATTTACTGGAAAATTGGGGAAATACCTCTAACTAAAAATCTGTCGACCTCCGATAATGTAAAAAATGTGGGAGATCGACAGATTTTTTGTCATACAGCACATATTGAAGTTTAAAGGTGGAAAAAATCCCTGTATAGAGGCTTTTCTTCCACCTGTAGCTTGAAAAATGAAACTACAGTTATTGACATGATTTTATTTAGTCAGGTAAAATGAATGAAGAACGGGTTCAAAAATAATAGATCGACAGAATGGGCTATTGAAACCCTTGATATACAAGGGCTAAAATCAAGCAG # Right flank : GATCAACAGCTCGGTTGTTGGTCTTTTTTTTATGCTAACCAGAATTTCTCGCAAAATCGAACAGTTAAAAAAGACAAAGCAGGATTTTTTTAGTATGATGAATGAGAAAAGGGGGGAACACGATGGATAAAGCCCAAAAATATATACCTGAGCTGTCCTCAGAACTAAGACAGAGTATTATCAAGATGCCTAAAGTGATTCGTGAAGCAAGTGGTATCAGTATCTATGGGAAGCGGATCAAAAGTATTATTTATACAATGGATGTTGCAGTGATAGCCAACAATGATGCGGATGCTATCTTGGCTGTTTATCCATGGACGCCGAATACTCGGATTTTATCTGCTGTCTCACAGGTTTCACAGGCGCCTATCTTCGCTGGAATCGGCGGTGGACTGACCTCAGGAAATCGATCTGCTCGGTTGGGGACTTTTGCAGAAGAGCAAGGGGCTTATGGTGTCGTGCTAAATGGACCGGCAGACATACATACGATTGAAGTCGTC # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCTAAACAGAGTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 155083-155765 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMM01000003.1 Enterococcus sp. 9E7_DIV0242 scaffold00003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 155083 30 100.0 34 .............................. CTTTGTAAGGGAGTAGATCATAAGGGACGTACTA 155147 30 100.0 34 .............................. GGTGCTTTGACTTCACCATTGGGGTTAGCAACAG 155211 30 100.0 36 .............................. TCCCTATGCAGTGAGGTAGAGCTTCTCTTAGGCACA 155277 30 100.0 34 .............................. ATATGAATGAACGTGAAATGGAGTTGAGTCTATC 155341 30 100.0 36 .............................. GATATTGATGAACATGGCGGCGGAGGAGGATACGGA 155407 30 100.0 36 .............................. TCAAATACAACTGTGTCAAACTCGATCCATGCATGT 155473 30 100.0 37 .............................. GCAAACACCGTCAAAGGTGGCGAAGATGTTGTATTCC 155540 30 100.0 36 .............................. CCGGTTATTGAGGTAGTTGAAACACCTGAGACGGTT 155606 30 96.7 35 ....................C......... GTTCTTGAGAAGCCTATACCTTGATTGTTGATAAC 155671 30 96.7 35 ...............A.............. CACTTAATCACAGCGATTAAATTGCATATCAGCGA 155736 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.4 35 GTTTTAATCTAAACAGAGTGTAATGTAAAT # Left flank : CATCGTATTCACGAGTAAGCAGCTGGCGTTCAAATGGAAAGGTTGCTGGAACCCCAGAGGCTGTTTCAGCTGCTGGTAAAGTAAAGGTATTCTCACCCGTCTGATTCAAGTGCAGCAATACACGTTCAAGAATTTTTTCATCGGATTCATTTGGCTGATTACTGACATTTCTGTAATCTGTTAAGAAGGTTTCTTGTTGCTTAATGACATTTTCTAACATGGTCGTTCCCCCTTGAATTAAGTCTAATAACTTCTACAATAACATGGTAGCGCAAATGGGAAAAACTGTCTAAATATTGGTTTATATAAGAAGATAAAAATCAATCTGTCGACATCCGATAATGTAAAAAACAAGGGAGCTCGACAGACGGTAAAAAGCTTGCTGTTATTGACTTTTATGTAATTAGTTAGGTAAAATGAATAAAGAAGAGTAGTAAAACTTGAGGGTCGACAGAATACCCTCTAGAAACCCTATTATATCAGGCTTGAAACTGGGGTGG # Right flank : TTTCGCTGATAAGCTTTCTATCACCGTATCAGAATTACGTCTTAACCTAAACAACCTGTAATCCAGACCAATTTATTTCGTCTAAAAATAAGTATCAATCAACTTCTCATCTAAGGCTCGCAAGAGTCAATCCAATGTCGAAAGGAGTATCTCTCTATGTCTCAACAGTCGCGTATGTTTTATATCATGAACTATCTGAGCGTGCATCAAGAGACGACAGCTCCTTTTCTGGCGGAAAAGCTGGAGGTTTCTGTGCGAACGATTTACCGAGATCTGGACAATCTTTCCGGGCTCGGTTTTCCTGTTTATGCGCAAAATGGTCGAAACGGCGGGATACGATTACTGGAAAATCATCAGTTGCCCGCGACTTTTGTAACGGAGGAGGAGCAAGAGACGATTTTATCTGGATTAGAAAATCTTGCTGTAACTGAGTTTGGCGGTGCCGATGAGTTGGCTGTAAAGATGTCTTCCTTGTTCAAGCGTTCTGCGGATTCGTGGCT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCTAAACAGAGTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //