Array 1 246659-246147 **** Predicted by CRISPRDetect 2.4 *** >NZ_MOBW01000059.1 Pseudomonas chlororaphis strain 48G9 48G9_NODE_102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 246658 28 100.0 32 ............................ AAGTACTTCGGCGAGTTGGCTGCCAAGCACGG 246598 28 100.0 32 ............................ GTTCTGGACCGGCGAAAAATTCCGCAACAGCA 246538 28 100.0 33 ............................ ATCAAGGCGTTGCAACGTTCAGGTCTGGTAAGC 246477 28 100.0 32 ............................ TCTGCGAAGCCCAGCAGCTCTTCGCGGGCGAT 246417 28 100.0 33 ............................ CGATAAGGGCGCCCCGAAGGTTGACGACGAGAC 246356 28 100.0 32 ............................ AGCGCCATTCGAGCCGCCCGCGCCGAGCTCAA 246296 28 100.0 32 ............................ AGAACGCCCTGTGGTTCGCGATGTACAAGCGT 246236 28 100.0 32 ............................ TCCCGCTGGTTGCCGATGGGCGCGGGGTGAGT 246176 28 92.9 0 ......................G.T... | CC [246152] ========== ====== ====== ====== ============================ ================================= ================== 9 28 99.2 32 GTTCACTGCCGAATAGGCAGCTTAGAAA # Left flank : AGGTGAGTTGCTCGCAGCCTTGAAACCCACCGCGGCGGGGCCTGCGGGTAACGATTCGCTCTTCACCGTCCGTCCCGGCATCAGCGCCGAAGAGGCGTTGCTTCACGTCTCCATGCTGCTCAAATCCGCCGAGGAGGTTTCCGACGAGATCACCGAACACGCCAGCGGTATCGAGCGTGGCCTGATCTGGTCGTTGGTGCATTCCGTGGAGATGGCGCGCGGAGTGGTGGATGCCTTGCTCGACGGAAATCGTCGCTGATCGGCAACGGCCCGCTGGCTGCGATCCTTCTTGATATTCGCGGCTGGTCGGGTCAGACAAAGCAAATCCATGACGCTAGTCTGAGCACCGGTGTTCTGCTCCCTGACGCTGACCCTTTTTTCCGAGCGGATTCCGGACCTATGTAAATCAAGCACTTACAAAGGCCCCCGAAAAGAGGGGTAAATACGGTGTTCAGCATGATTTCTCTTTGAAATCATGGTGCTATTGGGATATTTGTCTA # Right flank : CGCATTGAAGGTATGGCCCAACTCGCTTTAACGACTGGCGTTAATGGTCGGTAGAGTGGGAGCTCGCCTCGATCCCGGTCGGGGCGTTTTTTTGTCTGTAGACCCGTAAGAGGCGAACTACCAAAACAGCCACCTCATCAAAGTTCAGAATCGTCTTACAGCCTTGCCTTTCGCCACTTGCTAGGTTCGGGGAGTTGCAAAGAATCAGAGCCTCCCCCACGGATCAGCTAAGGCAAGGATGATAAATGCTCCCCTCTGCTCGCTTGGGCGACAAACACGTCTGCCCACTTCCAGGTCATGGCACCACCTCGATTACCTCCGCTTCCAGTGACATAAACATCAACTTCATGGGGGCCGCCCGAGTCGGTGACATCTGCGGTTGTGGTGCGGTTATTACCACGGGGTTTCCCTCGATCATCTTGAACGGGCGCCCAATGGCTCACCTGGGCAGCCCTACCAGTCACGGCGGAACGATCATCTCGGGCAGCCCCGATACCTTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //