Array 1 57397-59338 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJJPB010000023.1 Clostridium sp. WLY-B-L2 Scaffolds_23_59488, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 57397 30 100.0 36 .............................. GTATTTGCTGTAGGTTTAACTTGTACGCTAGGTATG 57463 30 100.0 36 .............................. AAATGTGGACTAAGAATAAGTGAGATACTAGGTTTG 57529 30 100.0 36 .............................. TCTTAAAATCCTCCTCTATTTAAACGACTAAATCAT 57595 30 100.0 36 .............................. TATATTTATATTAACTCTACAGGTAAATATTGTATA 57661 30 100.0 36 .............................. CCGTCAAAGAAGAAAACTCGCTGGGGATATTTGCAA 57727 30 100.0 34 .............................. ATACATACTGGGGCTTTCCTTTTTTCTCTTGCTT 57791 30 100.0 36 .............................. TTAGATTTATAAAGTCTACCCAAAGGGAATAAAGCA 57857 30 100.0 36 .............................. TTAAAACAAGAGAAGATAGATAGAGAAGTAGAAGTC 57923 30 100.0 36 .............................. AAATTAAAGTCTGATTCTGTGAACTGTACTCCATGA 57989 30 100.0 37 .............................. TTTACAGCATTAGATAGAATATGTACTATATTAAATA 58056 30 100.0 35 .............................. GCAGGAGCTACTCCTTTTCCGTCTGCCCCTTGATT 58121 30 100.0 36 .............................. AAGAAGAAAAATAAATAACTTTTGGGTAAAACTAAG 58187 30 100.0 36 .............................. ACATATTTCTTTGTTTCAAAATTCTCTATATCCACA 58253 30 100.0 36 .............................. GAATACTGATAGTATTTGATATGTATTGGTATGACT 58319 30 100.0 36 .............................. ATAAAACAAGTAAAGGCAGTAAAGCATAGCTTTAGA 58385 30 100.0 36 .............................. AAGCTTCTTCTCTTTCTTTTCTGGCTTTTTCTGCCT 58451 30 100.0 36 .............................. TAGTTTGAAATTATGTCATCTTCCACCTGCACAACA 58517 30 100.0 37 .............................. GAAATTAATTTAATATCATCTACGTCAATAGGCAAAA 58584 30 100.0 35 .............................. GAAGGAGATGGAGGTTGCAATAGTAAGGAAGAATT 58649 30 100.0 35 .............................. GAGACAAGAAAGCAAATTAATGAAATAAAAAAGAA 58714 30 100.0 36 .............................. AGACAATAAAAACATAATGAATAATCTTTCTTTATC 58780 30 100.0 36 .............................. GATGGCAGATTACAAGCGGGGCGAACTCCGTAGTAA 58846 30 100.0 36 .............................. TTTATTTGTTTCCCAATATATTTGCTTCCTATCTCA 58912 30 100.0 36 .............................. TGATAATGACAAGATAAGAATTACAAAAGATAATCC 58978 30 100.0 36 .............................. ACAAAAACATAGATACAATCTGCTCAACAGCATTTA 59044 30 100.0 36 .............................. TGTCCATATCTGTTAATTCTTTTTCTAGTTGCTTCT 59110 30 100.0 35 .............................. GTTTGTACATGGGTAATTGAAGTTCTAGCAAGTCT 59175 30 100.0 36 .............................. CCTAAAAAACCGTCCCCATTTAAATAAAATAAATAA 59241 30 100.0 38 .............................. AATATTAAAAGTAAAGCTAAAAAATATGTCTATGATAA 59309 30 96.7 0 .C............................ | ========== ====== ====== ====== ============================== ====================================== ================== 30 30 99.9 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : TTCCATCAAATTTATTTAATTTTTCATAGGCAGTTAAAAAAGTCTGCTGAGCTATATCTTCTGCATCAAAATAATTTTTTGTAAAAGAAAAACAGATGGTAATGACTAGACCTTCATATTGTTTAATATATTTTTCAAATTGATTTTCTTGAATAATCATCACCGCCTTTTTTAGCCTTACAATAATACAACGATTTATAAATAAAAAACACTTCAACAATTCAATTTTAACGTAAAATATTTTTGATAATCTATAATTTTTATAATACCCATTTTATAATTCAAGTACAAATTATAATCTTCATTTGATTAGACATCTTCTGTTTTCCAACCTACAAATAATAAGAAATTATTGCTAGCCCTTAGATTACAACGCCTCCATAAATCTTGTACTATTTATTTGTCTATAATAAAAATCGACTGGAAAAGTTTCGTTAAAATCCTTTATTTATAGTACTTCAAAGGATATAATAGAAATGTAAAATGACTATTTTACACAG # Right flank : GGTATTATGTTAAATATTAGTGACAAGGATAGAAGTGCTGAACCTTAACATGTATAATGGACCCAAGAATTCAGACAAAAAAATACTTGCTTTTTAGTTAGGTTCTCCATAATATTTTTATTAAGGATGGTGAATAACATGAGAAAAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 132-2663 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJJPB010000048.1 Clostridium sp. WLY-B-L2 Scaffolds_48_11896, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 132 30 100.0 36 .............................. AATACCAATAATAGGTGCTGCAATTGGGACTATTAT 198 30 100.0 34 .............................. CAGTTACCCTCAATTAAATTTTCTATTATAGAAC 262 30 100.0 36 .............................. TTATAGTAGTAGAGGCAGAATGGGGCAAGAAAATCC 328 30 100.0 35 .............................. AACCTCTGACATATCCACAGTTTTGGAATGACATG 393 30 100.0 34 .............................. CCGCCAGCCTCTTGTCCTGTAGTTTTACCATCAT 457 30 100.0 35 .............................. AGTGACAAGCTATGCGGAACATTATCCAACAGAAA 522 30 100.0 37 .............................. GGAAACTTCACTCAAACTACTCATGCTGCCTTTGGTA 589 30 100.0 36 .............................. GCTTATCACGGACGGACAACTCATGGACGATACACT 655 30 100.0 36 .............................. CAAGAATTATAGGAAAATTTCTTTTTAGAAAAGAGG 721 30 100.0 36 .............................. CGTAATGAGCGAGTTCCAGAGATTGCAGGTTGTTCC 787 30 100.0 36 .............................. TTAAAGGTATCTGACATTGTGTAACGACATCCAATT 853 30 100.0 37 .............................. ATTTACACGAATTATATAGAACTGATCCCTATATAAA 920 30 100.0 36 .............................. GGTAGACAGCGAAGAATATAAGCAGTGTGTAAAAAA 986 30 100.0 36 .............................. CTGCTTGCAGAAGCCAAGCAGACGGCAGATAGGTTG 1052 30 100.0 36 .............................. TAGGTATGGATAGAAGTGTGGCGGATGATGTAACTG 1118 30 100.0 36 .............................. CGCCAGATTCTCTGGATATACCCGTCGGAGAAAACA 1184 30 100.0 36 .............................. GGTGTCAACTATATAGGTGTCCAACTTGGATGAACC 1250 30 100.0 37 .............................. TGTTCCCCCTGCTACCTTATAAGTGATATCGACTTTA 1317 30 100.0 36 .............................. CTGGTATGCTGGAGGTAAATTCTCAACAGGTCTATA 1383 30 100.0 37 .............................. ATAGTGGGACTTACAGGAACACCAGCACCTAACAGCT 1450 30 100.0 36 .............................. ATATTGCTGACATTCTGGGGAGAGCTGAAGAACTTG 1516 30 100.0 37 .............................. GACCACACAAGGATGTATATAAGGAGTTGAATGGTTA 1583 30 100.0 38 .............................. TGTGGGAAGATTATAAATGCAGGTCAACGATATTGCCC 1651 30 100.0 37 .............................. GCTTTTGGAAAGAGTGGAAAAGGATTAAGACTAAGCA 1718 30 100.0 36 .............................. AGTGAAGGAAGGTGATAGCATGAAATTTATACCCTA 1784 30 100.0 34 .............................. CTGACCTGGAAGATTGTTTGGAATTGGAATGGGG 1848 30 100.0 36 .............................. AGTTAACGGTGGCAGGATCAGAAATCTACCTGAGCA 1914 30 100.0 35 .............................. AAATAAAAATACCAGTCAAAGTCCATTAAATCCCT 1979 30 100.0 34 .............................. ATAAAGGAGTAGAATTTGAAGTTCGGGATAATAA 2043 30 100.0 36 .............................. ACCGTGTGGCATTAAAACAATCCTATCTGGCATACC 2109 30 100.0 34 .............................. AATCCGCCTATGGTGGGGAACGGCACGAATTAAA 2173 30 100.0 37 .............................. AGGTTATGTAAGGAAGCCAATATGGCACAATCCACAT 2240 30 100.0 34 .............................. CTGCTTGAGGAAGCCAAGCGAACAGCAGACAAAC 2304 30 100.0 37 .............................. ATAACATCCAGAGTATCATCCATAAGTTCGGCGTCGG 2371 30 100.0 35 .............................. AAGCCCCCTGCATGGGATAAAACTGTATTCGTTAC 2436 30 100.0 36 .............................. TCCTCATCTCCGACTTTATCATCCATCATAAAAGCC 2502 30 100.0 36 .............................. AATCAAATTCGCCTCGCTTATAGTTAAGCCATTGTC 2568 30 100.0 36 .............................. ACGCTCGCGGAGCTGTAGGGCTTGACTATGAAACTA 2634 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 39 30 100.0 36 ATTTAAATACATCTCATGTTAAGGTTCAAC # Left flank : TAGATGTTTTTCCCACTTGTAGACACTTCCCCTTCTTAATTTTATTATAGATCTTTAGTAAATCTATTTCTTTGTGTCTACACTTTTATACTAACATCAGATTTTGCTAATTATATATTAGGTGAAATTTAA # Right flank : CTAACGTAAAATAGCCATTCTTTATTTTTATTATAGGACTTAAAGTCGCATAAATAAAGCATTTCGGCGAAAGTTTTCCAGCTGTTTTTATTTTTTTAAGAGAAATAAAAACAGGTATCTCAATCCATTCCATTTCAAAACATTGAAACACTTTTAGAGTTTAATTTGGTTGGAAATCATTTTGCAACAAGTGGTTTACTTATAGTAAACTAATCACCACTTAGCTGCATCCAGAGGTACTTCAAGCTTGAAGTTGGAGTTTCCTGGAAAGAGAGCAGACTCCACGGAATATTTTTTTACCAACAGTAGTTTCTAGTTTCTCTTATTTTCCAAGTTATCCCTATAGTTTCTACGGTTCCTGTTTTCCTTACTTATGCTGTGGAGTGTAATCTCAGACTCTGAGTCAAAATATCCTCATTGACATTGGAAAATCACATTTGATAAGCCTGGAGCCAATATTTTTATAATTTTATAAGCATCTTTTACATCAACCCGTTTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 130-2020 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJJPB010000054.1 Clostridium sp. WLY-B-L2 Scaffolds_54_7828, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 130 30 100.0 35 .............................. CGGAGAATAGTTCAGAAAGGGCATAGCCCAGAGGC 195 30 100.0 37 .............................. TTCTGCACCACTCCAATTGGCAAACTGTTTTCCCTAG 262 30 100.0 37 .............................. CACGTACGTGCGTGTATAATAAAAGTAAAGATAAGGG 329 30 100.0 34 .............................. TACGAACCTTAGGCTCTAATATTCTATCTGTAAG 393 30 100.0 38 .............................. CCTGTAAAAGGTTCTCTGCCAAATAATACAACAGGTGT 461 30 100.0 37 .............................. TCCTCCTATTTACCTTCTTTAAGCTTAAATTCTTTTT 528 30 100.0 36 .............................. TGAGTCCTTCATCATCAACCCATATTTCCATCTTGG 594 30 100.0 37 .............................. TAAGCAGAATATTCAAAATAAAGAAAGTAATAATTCA 661 30 100.0 38 .............................. TATTGATGGTATGGTAGACAAGAATGGACAGCCTGTAG 729 30 100.0 37 .............................. GGGAATTTACCAGTTTTAAAAGCATCGCCTATAGCAT 796 30 100.0 37 .............................. CATACACAGAAAGCTACAGATAATCTAAAAGAATGTA 863 30 100.0 35 .............................. CTTATAACAGCTTTGGAGAATGCAAGATAGACAAG 928 30 100.0 36 .............................. CCACCAAATCTTTCTTGTGGCCCTTCCGTTATGCCG 994 30 100.0 37 .............................. TTTCTTCTATCGGGTCACCGTTTATCCAAACCGCACC 1061 30 100.0 35 .............................. CATCTTCTATGTTCTTTAGAACTGTCTCTGCGTTT 1126 30 100.0 36 .............................. TTTGTATTCGCATATCTAACCTCCAAATTAGTTTAA 1192 30 100.0 36 .............................. TGGTTTTTATACATACCCTTTCACCTCCGGGAAAGC 1258 30 100.0 36 .............................. TTTGTATTCGCATATCTAACCTCCAAATTAGTTTAA 1324 30 100.0 36 .............................. TTGGCAAGACATACAAAAATTTTGCTGACAATTGGA 1390 30 100.0 37 .............................. CAAATATATTGGCTTATTCTATCCTTGCAATCTCCCC 1457 30 100.0 37 .............................. CTTTCTGCCTTGTTCCATGGTACTTGTTTTCTGTATT 1524 30 100.0 38 .............................. TCCAATGGCTGAACATCAAATTTGCTTCTGTCCTGGCT 1592 30 100.0 38 .............................. AATATGTATTAGGTAGGTGAGGTGACATGTAAGGATGG 1660 30 100.0 38 .............................. TAAGAGAATCAACTATATTAATGTTCTGCTGTGAACCC 1728 30 100.0 37 .............................. TTAAATATTCCTCGGCTGCATTTACTATGGCCTCCCT 1795 30 100.0 36 .............................. ACATCTTCCATCTTGAATATGTGTTCAATCATCTTT 1861 30 96.7 35 .................G............ GCAGATAATTCAGGGTGTTTTTCAACTTGATTGAT 1926 30 96.7 35 .................G............ AGTCATGTTGGTCCACCTTCCCAGTATGTTGTACC 1991 30 83.3 0 C.......AT.......T..........C. | ========== ====== ====== ====== ============================== ====================================== ================== 29 30 99.2 36 GATTTTAGGATACCTATAAGGAATTGAAAC # Left flank : ATTGAATTAAAATAGTTAAGGGCTATTTGAAAATTAAAATATATTCAGTTCAAAAATTCAAAAAATGTGTCTACTTTATTGACATAGATCCACATCTGGGTTGGACTTATTCGAAGAGAGTTATAAGAAG # Right flank : CCCAAATTACTAAAGTACAACAACTTGCAACATTGTGGATTTGGCCTATATTCGAATTGATGAACATATATGAGTTAGCTATAATAATCATATGGAGGGGATAAGAAATGTCAGGTAATGGTAAGAGGTATAATACAGAATTCAGAGCAGATGCTGTAAGGCTTGTAGTAGAAGAAGGTAGATTTGTAAACAGTGTGTCAAATGATTTAGGCATAAATGAGCAAACCTTGAAAAACTGGTTCAGACTCTTGGTTTTCAGCAGCACAAAATTTTGGAGTAAATGCTAGGGAGCTAATAGAGATATGTACATGGGCGCAAAATTCTGATATGTCGTATGTTTCGAATACTAGGAATTTTAGATTGCAATTAGATATAAGCTATTATAATAATTATACGACTGTTATGTTAGATTAGGAGAAACTAAAATGTATAAATTTCAATACAAAGATGGTGCTGAAAAGCAAAACATAATTGACCAAAACAAAGATAAAATATTAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTTAGGATACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 6133-3885 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJJPB010000044.1 Clostridium sp. WLY-B-L2 Scaffolds_44_15077, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 6132 30 100.0 37 .............................. TAGGTAGTATATACACTGCACCAGAACTGTTAGAGGA 6065 30 100.0 37 .............................. TAAGCATAATTTTATTTGCACATTTTTAAGCCTGCAG 5998 30 100.0 36 .............................. TGGATATACATTCCAACCCTTGGCATTAAAACTTAC 5932 30 100.0 35 .............................. TGTAATAGGGGAAAACCTTAATAATATGTTAAAAA 5867 30 100.0 38 .............................. CTCTCAAGCCGACAGCATCATGGATTGGAGAGACTACC 5799 30 100.0 37 .............................. TATGTATAGCATCTGAAAGCAACCAACAGCTTTTTTT 5732 30 100.0 38 .............................. TACGAAAAATATTTGGTATATATACTTCGGGTGATGTG 5664 30 100.0 37 .............................. TCTTAAAATATGTGAAATAAATGAACTAGTGAAACAA 5597 30 100.0 36 .............................. TGGTTTGGAGATGGTCCTTATAAAAATTATGAAGAA 5531 30 100.0 37 .............................. ATATTCTGTTAACAACATTATAACAAATTACGTTATA 5464 30 100.0 38 .............................. TATAGAGGCTAGAAACGCCTACTATAAGGAAAGAAATG 5396 30 100.0 37 .............................. TTTTGATGGGCTTGAATCTATAAACGTACTGGATAAT 5329 30 100.0 37 .............................. CCTATTAGATATTAAGGAGGAATTGAAATCATGAAGA 5262 30 100.0 38 .............................. TAGCTCTCTTACTATAAATGGTGGTAACGTAAATATTC 5194 30 100.0 36 .............................. AGTCTATAGGATACAACGATAAAAGAGAGATAGAAA 5128 30 100.0 37 .............................. AGGCACTAATACACTAGATACGGAATAGTTAAAACTA 5061 30 100.0 37 .............................. CCTCCAATCTGTACCCGCCTTGTAAAATCCCTTCCAA 4994 30 100.0 39 .............................. TTAACTAAGCCTGATGCTGTAAGTATATCTTTATTTACG 4925 30 100.0 40 .............................. TTGGTTTCTGCAATTGTATGCTCTCTTTCTGTAGCTGCCT 4855 30 100.0 38 .............................. TGATATGCTGCAAGATACTTTTTATACCAGAAGAGATG 4787 30 100.0 36 .............................. ATATTAATTCATTATTGGGAGGAAAATAAATGATAC 4721 30 100.0 36 .............................. GTGCCTTAAATTCTAATTATCTTCCCATTCTCCCCA 4655 30 100.0 37 .............................. TTATCTATAATATCATTATAAAAACCATCTGTAAATA 4588 30 100.0 37 .............................. AACAATTCTTTACTAGCATTTTTATAAGTTCTAGAAT 4521 30 100.0 36 .............................. CTAAATAATATCCATAGGTTATACAGAGAAGATCCC 4455 30 100.0 38 .............................. TACTTCCAATCCAATTCTTTATAAATCCTCCCATATCC 4387 30 100.0 38 .............................. TATTTATTGCTATGCAGCATATTTGTACAAATATGAAT 4319 30 100.0 39 .............................. GTTAGATGTAGAAAATAAATCTCCTATGCTTATATTTCC 4250 30 100.0 36 .............................. TTGGTTGTATTATTTACAGTAGTTGATGAGAGCGAG 4184 30 100.0 37 .............................. TAGATGATACGGGCGTAGCTTATGTGGATGCAGAATG 4117 30 100.0 38 .............................. TCCAATCTGGGGCACAGGATAAATTTTGATGCAGTAAA 4049 30 100.0 37 .............................. AAAGCAAAAATTCTTATAGAACAATTCCCATATCTAA 3982 30 100.0 38 .............................. CGTTTGGGTGAAATTTTAGGTTTAACATGGGACCGTAT 3914 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ======================================== ================== 34 30 99.9 37 GATTTTAGATTACCTATGAGGAATTGAAAT # Left flank : TCTTCCTTTCCTCCTCTCCTTAAATCTTTTGCTGAACCATAACATGAGATGTATTTAAATTTTTGTTGGTTTGGGGAATTTTGCTCCGGCTCCATGCTGAACCATAACATGAGATGTATTTAAATAATGGGAGGTAAGGATGTTTGTAGCAAGAGTAAAAGCTGAACCATAACATGAGATGTATTTAAATTCGTTTTTAGTATTTACTGTAAACGTGACAAGCTGGATGAACCTTAATATGAGATGTATTTAAATTTTGGCGCAGCAGGATATATCGGCTATGAGGGAGTGCTGAACCTTAACATGAGATTAATTAAAAAATGTTTTAGATCTGTATTAAATTTTATGTTGTCGACCCTAAATAGAGTAAAAATTACCGGAGGTCGACAATTTTTATGTTTCCAGTTAATTTGCGGCCTGAGATTGATTTTTGAAATTCTTCCATAGATTTTCCTGGATATTGCAATTTTGGACAAGCTGATGTATTCTATACTCGATGG # Right flank : TCCAGTAAGGATATTGCCCTGATCTGTACTCGAATTAATGAATACATATGAGTTAGCTATAACAATCATATGGAGAAGATAAGAAATGTCAGGTAATGGTAAGAGGTATAATACAGAATTCAGAGCAGATGCTATAAGGTTTGTAGTAGAAGAAGGTAGATCTGTAAACAGTGCGACAAATGATTTAGGCATAAATGATCAAACTTTGAGAAACTGATTAAATAACAAAAAGAAGAAAGAAGATCCTTCTAAATCTAAGATAGATGAACTTGAACATAAACTTAGAGAAAAACAGAAAAAAATCAATGAACTTGAGAAGTCAGTTGATATATTAAAAAAGCTGCCATCATCTTTGTCGGAGACAACCGCAGGTAATCTATAAATTTATTAAAAGTCAGCGTGGCATACATTCGGTTACAAAGATGTGCAAATTATTTAATGTGTCACGCAGTGGATATTACTTATGGAATAGGCCTTTAAAGAGTAAAATAAAAGCTGAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTTAGATTACCTATGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 7521-6316 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJJPB010000044.1 Clostridium sp. WLY-B-L2 Scaffolds_44_15077, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 7520 28 96.4 37 ...........................T TATTCCGCCATACTCGTCTTGTCCCCAGCCATAAGTT 7455 28 92.9 37 ..........................GC TTTTTCTACACGATAAGATATAACTTTCATTTCAGTT 7390 28 96.4 37 ..........................T. GATGGCAGACCAGTACAAGCTATTATAATTGACCGTT 7325 28 100.0 37 ............................ TCGTTCATCTGGCATCTCCTTTACAGTTTTCTTTGTT 7260 28 96.4 37 ..........................T. GGCTACGTACAGGACAGAGGTTACAAAATAGGGAGTT 7195 28 100.0 38 ............................ ATTGATCATAGTATGTGGAAGGATTTTTATAAAAGATC 7129 28 100.0 38 ............................ ATGTTCCCAAAACCTAATAAGCTTCTTATATTCTTTTC 7063 28 100.0 38 ............................ ATCCATTGATTAAACTTGTTATTGACTTGATTTGACTT 6997 28 100.0 37 ............................ ATGAAAAGAAGCCAACACCTGTATTTGTCAATTTACG 6932 28 100.0 38 ............................ ATCAGCCCCAGAAGCTTGCTGAGAGATCAAGACTACAG 6866 28 100.0 37 ............................ ATCGAGAGGAGGTGATACATATGTAGGTGCTATATAT 6801 28 100.0 38 ............................ ATTCACCATACATTTCTTCAATACACTGCTGAATACTC 6735 28 100.0 38 ............................ ATAAGTGTACAAGCTCCTGCAACAGAACCACAGACAAA 6669 28 100.0 39 ............................ ATAATTTCATCTTCCTTTCCTCCTCTCCTTAAATCTTTT 6602 28 100.0 37 ............................ ATTTTTGTTGGTTTGGGGAATTTTGCTCCGGCTCCAT 6537 28 100.0 37 ............................ ATAATGGGAGGTAAGGATGTTTGTAGCAAGAGTAAAA 6472 28 100.0 37 ............................ ATTCGTTTTTAGTATTTACTGTAAACGTGACAAGCTG 6407 28 89.3 37 .A......T...T............... ATTTTGGCGCAGCAGGATATATCGGCTATGAGGGAGT 6342 27 89.3 0 ........T...........-..A.... | ========== ====== ====== ====== ============================ ======================================= ================== 19 28 97.9 38 GCTGAACCATAACATGAGATGTATTTAA # Left flank : AAAGATGATCTTTCCATAAGCCCTCTTAACATAAAAAAACTAAAGGAAAGAGTAGTTATTTACAAGGATTATGTTATAAAGGGGTGGGATGGAGAATTTTTAATTGAAGGCTCAAAAGAACTTATGGATATAGCTTATAATGCGGGCATAGGGTCCAAAAATTCTCAAGGATTTGGATGCATAGAGATAAAGAAATAAGCTATTAATGGTAGGCTATTCCTTGAGACTATGAATGAAATGTGAACAGAATGTAAGTAAGTTACTGTACATTAAGTTTTTTATGTTTTTGCACAATTATTCTGCAAAATATTGTAGACTTATTTTCCAACCTAATTTATAAATAAAAACAGCAAAAATCGTTGACTTACAACGTTTTATGCTGCTTTTTTCATAGTTATTCCAGAAAACTAAAAATGTCTGGAAAATTTTCAGAGAAATTCTTTATTTATGCTGCTTTAAGGCATATAATAAAAATAAAGAATGGCTATTTTACGTTAGTT # Right flank : AAAATGTTTTAGATCTGTATTAAATTTTATGTTGTCGACCCTAAATAGAGTAAAAATTACCGGAGGTCGACAATTTTTATGTTTCCAGTTAATTTGCGGCCTGAGATTGATTTTTGAAATTCTTCCATAGATTTTCCTGGATATTGCAATTTTGGACAAGCTGATGTATTCTATACTCGATGGGATTTTAGATTACCTATGAGGAATTGAAATTAGGTAGTATATACACTGCACCAGAACTGTTAGAGGAGATTTTAGATTACCTATGAGGAATTGAAATTAAGCATAATTTTATTTGCACATTTTTAAGCCTGCAGGATTTTAGATTACCTATGAGGAATTGAAATTGGATATACATTCCAACCCTTGGCATTAAAACTTACGATTTTAGATTACCTATGAGGAATTGAAATTGTAATAGGGGAAAACCTTAATAATATGTTAAAAAGATTTTAGATTACCTATGAGGAATTGAAATCTCTCAAGCCGACAGCATCATG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAACCATAACATGAGATGTATTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 14318-11502 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJJPB010000044.1 Clostridium sp. WLY-B-L2 Scaffolds_44_15077, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 14317 30 100.0 35 .............................. TTATTTCTATATACGAGTGTATCGGCTTGCCTTAA 14252 30 100.0 36 .............................. ACTATATTATCAAGCTCTATATGGAAGGGGTTTTTA 14186 30 100.0 35 .............................. CGGAAAACAGCCTAAAGAGTATCCTTCTCAAGCAA 14121 30 100.0 37 .............................. AAAGTAAGAGATGCCATAAATGGAGTAAAAAAAGCTG 14054 30 100.0 35 .............................. TTAGGTGCAATGAAAAAGTTCAACACTGTATCTCA 13989 30 100.0 37 .............................. TTATATTTAACTCCTAAATCTTTACATATCTGTTCTA 13922 30 100.0 36 .............................. ATATTTCCCAACCCTCTATATCACCTTTATCAAATC 13856 30 100.0 36 .............................. AAATAAAAAAAGAGAGCCACATACCACAGAATTTAA 13790 30 100.0 35 .............................. TCATAAGCTCAACCACCTCTATAAACACTATATAA 13725 30 100.0 37 .............................. TCATGTTTTGTAGTTCTTTCTATTAGGTTACATTCAA 13658 30 100.0 37 .............................. GTAATAAATTCCTCTGGTTCATTTTCTAATGTTTTCT 13591 30 100.0 36 .............................. CTTGCTAGTTCAATACTTTCTTTAGCTGTTGCTGCA 13525 30 100.0 36 .............................. TTTGAATTCATAATATTCCCCCATTATTTTAACTTA 13459 30 100.0 36 .............................. AAGAAAAATAAAGATGGATATAAACATGTTGGAGCT 13393 30 100.0 37 .............................. ATATTAGCATTGCACTTTCTAGTCCTTCTATTTTCCC 13326 30 100.0 37 .............................. ATATATAAGTAAATTTTATCTTTATTATTAAGCTGTC 13259 30 100.0 36 .............................. GATGCAATAGACAGTGAATTATGGAAAAACAGAATT 13193 30 100.0 38 .............................. TCCCTTTTTTAAATTCTGTAAAACTAATTGATATTTTC 13125 30 100.0 37 .............................. ATTTTTTATAGCAATTAATTATAATTAAGTTATCTTG 13058 30 100.0 36 .............................. TGGATATAGATAGAGGAGCTTACAACAAGGAGGATA 12992 30 100.0 38 .............................. ATTGAAAACATAGTTGAAAGCTTTAATATAGATGCAAG 12924 30 100.0 35 .............................. ACGATATTGCGTTTTGAGATTTATTTAATTTTTTA 12859 30 100.0 36 .............................. TGACCTCTGTATTGTTTTTCTAGGCTTTTAATAACT 12793 30 100.0 36 .............................. TACTGTCATTAGGAGCTTTTACTTCTGTATTTTTTC 12727 30 100.0 37 .............................. ATTGTTGGGTATGCGCAGTAGATACTAAAAGGCCTGA 12660 30 100.0 38 .............................. CTGGTTATTTTCGTCATTTTGACGGTACCGCTGCCTTC 12592 30 100.0 36 .............................. CTGAATAATAAAGTATTTTCAATATTTCTCGTCCTG 12526 30 100.0 36 .............................. TAATTTTGTTGTACATGGCAATCAATCTTTCGGCAT 12460 30 100.0 38 .............................. CAAACTTATATCCATCATCCTCCTCCACAATAACAATA 12392 30 100.0 36 .............................. AAGTAGATGCGGTGATAACAGATGAACCATATGGGA 12326 30 100.0 36 .............................. TAAGATTTACAGAGAAGCCTTATCAACTTAAAAACA 12260 30 100.0 36 .............................. CCGCAGTTTCAAACGCTGTGTACTGTTGTGCAGGCG 12194 30 100.0 39 .............................. TGGATATATCCCAGGCTACATTAAGTAGGAGGCTAAATG 12125 30 100.0 35 .............................. TCCAAAAAATAAATATTAAAATGCTGGAAAATGTC 12060 30 100.0 36 .............................. AAAAGACAATATGATGATTTGATATAAGGTATAGCA 11994 30 100.0 36 .............................. TCTAACTTTTCCTGTTCTTTTACAGAGAGAGTTGGT 11928 30 100.0 35 .............................. AAAAGTACTTCAAAGAAATGTAATTGACCTAACAG 11863 30 100.0 36 .............................. TTGGTATTCCAGTGAAAAGGCTTATTTGCTTATATG 11797 30 100.0 36 .............................. TTAGTATATGCATCTATTGTTCCTTTGTCAATAACT 11731 30 100.0 36 .............................. AGTGATGGCAATAGTGATGCAGAAAGGTTCAAAGAA 11665 30 100.0 36 .............................. TCTTGGATTTCAGTCAATCCTTTTGCCAGAGATGTA 11599 30 100.0 38 .............................. AGCTACCATTTGCAAGTTTTCGCCTATTTCTAACCCAT 11531 30 90.0 0 ......................G.A.T... | ========== ====== ====== ====== ============================== ======================================= ================== 43 30 99.8 36 GTTTTTAGATTACCTATGAGGAATTGAAAT # Left flank : GATTTAAAAATTTACCGCCTGTTTTTAAAGGTATATGACAGAACTGGCCGTCAGTTGATTTCCCAGTTGATTGATGATCCTTATTTACAGCGGGATTTTGAACTTGTATAATTGTATTAAAAATTTAACTGAGGCTTGTTTTTATCCGAACGCTACCATTTGCTAATACTCTCCAGCTTCTCAAAGTGGGAGATAAGCACTGCTACGCACCTGGGTTCTTCCACTAAAGGATAACGTATTCTAAGTGCTAAAGGCACTAACAATACTGTTAATAAGGTTCAGGTGGAGGAAAGTATTCCTTATTAGCAAACTCCATCTGAACCTAAGAATCACTTGAGGTAACTTTTGTTGTCAACCCTGAATAGAGTAAAAATCACCGGGGGTCGACAATTTTTATGTTTCCAGTTAACTTGCGACTTGAGATTGGTTTTTGAAATTCTTCCAAAAATTTTCTTAGATATTGCAATTTTGTACAAGCTGATGTATGCTTTGTTTGATTG # Right flank : ATCAAAAATACTTTTTTCTAGAAGTGTTGATATTACTTGCATTGTGGGCATGTAGGAATCTTGCATATGCCCGGCTGGTGACAAATTGGGGACAAAATTATTTACCTTCAAATATGTCCTTGAACTGGTCGAATTCCTGAACAACTTTGTTTTCCATTTTCTTCGTAACACGCAGATACGTGTCTTCTGTAACTTTTTCGCTTGAGTGTCCAAGTCTTTCCTGGATAGATTTTACGGTGGCACCATGTTCCAGGAGATACGTAGCACTTGTATGACGCAGGCCATGGAGTTTTACGTGGCGTATCTTATTCTTTTAAAAAAAATTCCCCACCCAGAGTAGGGCAGGGAATACATTAGATGTTTAGCTTCTGCTTTATTGCTTCCTGTAGTAACTGGGAAAAATTAATTTTATTTTCCTCAGCTTTATACTTTAGCCACTGCGGCATTGTCACGTTGGTGTTTACAGTTTTGTTGTTCATCTGAGCCCTCGCAAGCTTCAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGATTACCTATGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 12599-14496 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJJPB010000009.1 Clostridium sp. WLY-B-L2 Scaffolds_9_116014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 12599 30 100.0 37 .............................. GTGAATAAGATGATGAAGGATTAATTCGCAAAACAAA 12666 30 100.0 35 .............................. TAGAGAATTTAGTATGCCTAGTTGCTGGGCAGATG 12731 30 100.0 36 .............................. TACGGAAAAAGAAATCCAGGAAAAACTTAATATTTC 12797 30 100.0 36 .............................. CTTTCCATTGTATTTCTATAGGAAAATCATCCCTGC 12863 30 100.0 36 .............................. TGAAGATGGCACAGGGCTTCCAAGGACTTGCGAATA 12929 30 100.0 37 .............................. ATTTTTGACGTATTTTTGCCGTCAAAAAATACTGGCA 12996 30 100.0 38 .............................. TTTTCTATATAAAATCTCATATTCCTTCTTAAATATTC 13064 30 100.0 36 .............................. ATGCCTTGGCTAGTTAAGAAGTCCTCTACGCCTTTT 13130 30 100.0 38 .............................. TAACAAAGGCATGTTACAAAAAGATATCGGTAATTTAT 13198 30 100.0 37 .............................. AATTATGGCAGCTAATATATATGAAACTGTAGAGGGT 13265 30 100.0 37 .............................. CCCCTTGTTCTATTAGGAAGCTCCTTACCATTTTATT 13332 30 100.0 34 .............................. TAAGAAATGCACTATACATATCTCTCTGTATATC 13396 30 100.0 36 .............................. CGGTATCTGTCACGGTAAGCGACTAAAAAAGGAGAT 13462 30 100.0 37 .............................. TACAATGGCAATGCCAGATGGTACGATTAAAAATGGA 13529 30 100.0 37 .............................. TTTTTTTACATATCTCTGTATGATATTAAGTTGATTT 13596 30 100.0 37 .............................. AGGGTATTAACTAAATTTTTTATTTGCTCACATAGAT 13663 30 100.0 36 .............................. CTTTATTGTGCCCCAAACCATTTTTTAAAGATCTGG 13729 30 100.0 37 .............................. CCCATCTCCAACGGTACTTGTCTTCTTTGGAATTGCA 13796 30 100.0 38 .............................. CTACAGGTAATATAGTTTTAGTTGCCTTCTGGCAAGAA 13864 30 100.0 36 .............................. AATATAGGGATGTATTCTAGGAGGTGGTAATTTGAA 13930 30 100.0 37 .............................. CATAGAATAAAGCCTGCAAAACATTATCTGTAATTGT 13997 30 100.0 37 .............................. CAGAGATGCCAGTAACCATACCCGGTATAACATCTGT 14064 30 100.0 37 .............................. TACATTTGTCTGGCAATTTCAAATCTCTTATATAATA 14131 30 100.0 37 .............................. TTGTTAGAGGGCTTTCAGATGTTACGATACCAATTGT 14198 30 100.0 37 .............................. CAGGAAATGTTCCTACAGGTTCTCAATCAAAGACACA 14265 30 100.0 38 .............................. ATACTGTGTAAAGTAGAGGAGCTGTAAAAATGGGACTA 14333 30 100.0 37 .............................. TAAAATAGACTTTAAAAGTTTCATTAATGTATATATA 14400 30 96.7 37 .............................T TAGATGATGTTTACAGCAATGGGAGTAAAGCAGATGG 14467 30 93.3 0 .................G...........T | ========== ====== ====== ====== ============================== ====================================== ================== 29 30 99.7 37 GATTTTAGATTACCTATAAGGAATTGAAAC # Left flank : GTTTGATAGTAGTTCATGCTTGAATAATTCTTTAGAAGATCAATTAAAAAAATAGAAGAATAAAAATAGCAAAAAAGGTATATAAATATGAAAAATAAGTTCATAATTATTTTATGAACAAGCAAATATAATAAGTGCATACATGAGTTTCAAGGTGATCTGGTTGAAATACGATTTATTTAAGAAGCCATTATAAATATTGTATGCAGGTTTTGAAACTGGAATAGAGATATTTGCAAGTGCATTTATCATAAAAAAGCTGAGGGTGCAAATTGGTTTAATGCAGATGTGTTTTACATTTTTAAGATATCCGTGGAGTGATTTAGTGATTTATTATTTGATACTTTAATGTCGACCCTGAATAGAGCAAAAATTACCGGGGGTCGACAATTTTTATGTTCCCAGTTAATTGGCGGTCTGAGATTGGATTTTGAAATTCCTCCAGAGATTTTGCTGTATATTGCAATTTTGGATAAGCTGATGTATTCTATACTCGATGG # Right flank : TTAAGCAAGTAAATGGTTGACTTGGTATTCCAGTTTTTATAGCCTTTCAAATGTTTTAGAGCCTGGAAAAACGAATGATAATAGCCCAGCAAGCATAAATGAATTTATTACTACTACGTTATCTAGAACTTTTTATATAAATAAAAATCCAATTAGTCCTAATACGAATTATAATTACAGATATGCGAAGATGATAAATTTGAGATTGGGATGATGGTACTAAAGAATTAGAGATAGTTTTTTTATTTTGCCTTTATTTTATTGTACTGATATGTTAATATGTTTTCCAAAAGGTACTATTGAAAGGTAGATGAAGTTATGGATACTAAAATAGTTCAGAAAAATGGTAAATCAATTGCAATTATTCATAGTAATGATATATTAATAAAAGATATTCAATCAACTTTGGATTTTATAGCAACTGTTTCATATGAATCAGAATGTTATAGAATTGCTTTAAATAAAGAAGCTATTACGGAAGATTTTTTTAAATTGAGTAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTTAGATTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 27171-28981 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJJPB010000009.1 Clostridium sp. WLY-B-L2 Scaffolds_9_116014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 27171 29 100.0 36 ............................. TATCCAACTCATGCCCATTCTTTTGGTGTACTGCAG 27236 29 100.0 37 ............................. ATGCAACAGCTTTGCTCAGATTAAAGGATTATATAGG 27302 29 100.0 36 ............................. TTGCTCCTATAATCAATACTATAGGATTCGCTGCAG 27367 29 100.0 36 ............................. CAAGCAGTGGAAAAAAGACAAGAATGGCGTATATGG 27432 29 100.0 37 ............................. TGAAATGTGTAGAAAACGTGGATAGGCTAAGAAAAAG 27498 29 100.0 37 ............................. TCGTAAGGCTAAAGATAAGATGCTTACCAATATAAAG 27564 29 100.0 37 ............................. ATTAAAGATGCTATAGAGTTAAATAGAAATATAAGCG 27630 29 100.0 38 ............................. AGTGAGATAAAAAAGCAAATTGACAATCTGCTAAATGG 27697 29 100.0 37 ............................. TATTAAATTTGTTCTCTGCTTCTTCTCCCATTTTAGG 27763 29 100.0 37 ............................. TCTGCTATAATAACAGGTCTACATGGATGCATTTTTG 27829 29 100.0 37 ............................. TTTTCATACTCACTGTTTAGAAATGCCTTTGGACATG 27895 29 100.0 38 ............................. CATTCCTCCTATTTAAATAGACATTTCCAGAAACTTGG 27962 29 100.0 39 ............................. ACAGATGGTACATCGGGCACAAACAACCATGATGCATCG 28030 29 100.0 37 ............................. TTTCGTCTAAACTTGAATCCTGCCCACTTACTCTTGG 28096 29 100.0 35 ............................. GTTAATGATCCGGCATCAGAGGCAAGAAGCAACAG 28160 29 100.0 38 ............................. TGGCTTCAGGTCCTTGGAGTATATTGCCAGAAAGGGTG 28227 29 100.0 39 ............................. TAGTTAGCTATATAGCTATATTATATATAAAACTATATG 28295 29 100.0 37 ............................. ATTAATGGTAATACTAAAAGTTGCGGATGCTACAACG 28361 29 96.6 36 ................A............ TTAAAATTCTTGTCATAGTTGTCATAACCTCTCTTA 28426 29 96.6 36 ................A............ AATGTATATACGCAGGAATTCATCAAGGTAAAAAGA 28491 29 96.6 37 ................A............ TCTCAAATAGTGTTCCATTCGATTTTAGCGAGATTAA 28557 29 96.6 36 ................A............ TAATGTCATCTATCACAAAAGCTTTACCTGTCTTTA 28622 29 96.6 36 ................A............ TCATACATTGAACCGTTTGAAATTTGGGGTGCTGAT 28687 29 96.6 37 ................A............ CAGAAAAATCCATTGATGTTGATGCGCTTGCAAAAGA 28753 29 96.6 36 ................A............ CAGGGTAAAGGAGGTGTTAGTTCAGCAGATAAACAA 28818 29 93.1 37 ......T.........A............ TTTAATGCAGATCCTGCTTCAGGTGAGAGGCTGTTAA 28884 29 93.1 38 ........G.......A............ TTAATTAGCATATACATTTTATGCCAAAGAGGATATTG 28951 29 86.2 0 ........G.....G.........T...A | TG [28973] ========== ====== ====== ====== ============================= ======================================= ================== 28 29 98.2 37 ATTTTAGATTACCTATGAGGAATTGAAAC # Left flank : CATATAGTGGTTTTGTTGCGAGGTGGTAATTGGTGTTTGTAATACTTGTCTATGATTTTGGAGAAAAGCGCGTAGGCCGTGCTCTTAAAACATGCAGAAAATATTTAACCTGGGTTCAAAATTCCGTTTTTGAAGGAGACATAAGCATGGCTAATTTAAAGAAATTAAAGTGTCAGCTTTCTGACATCATGGTAAGCAGTGAGGATTCAGTGATAATATATACTTTTAAAAGCACTAAATATTCTAATAGAGAGGTTCTTGGAGTGTCGAAAAATCAACAGGATATATTTTTATAAAATAACTTGCTTAATTTTCAAAAACATTTTAGGATTACCTTGAATTTTACGTCGTCGACCCTGAATAGAGTAAAAATTACCGGGGGTCGACAATTTTTATGCCTGCAGTTAATTGGCGGCTTGAGATTGGTTTTTGAAATTCTTCCAGAGATTTTCCTGGATATTGCAATTTTGGACAAGCTGATGTATGCTTTATTTGATAGG # Right flank : ATTAAAAGAAAGTTTGACCAAATTACCATGAAAATAATTAACAAATTATGAATAAAAATGACTGTTTTACATTGGCTGAACATTAACATGAGATGTATAATAAATCATGCTATTTCTAATATTATGAATAAATGTAAAAATAAATATGATATAATTAATTCATAGCTAATGTCTAAAATATGTTTTGAGTAAGGATGGATTTTGTCATGAATAGAGTTGAATTGTTAAATATAATTGAAAATGGAGAAAATTCATATATAGAATTTAAAGAGGAAGGCATAAAGGCGAAAGAATTGGCGGAAGAAATTGTAGCTTTTGCTAATAGTGAAGGCGGGACAATATTAATAGGTGTATCTGATGACGGTAAAATAAAGGGAATAACTGATAAAAACATAGAAGAGAAAGTTATGAATGTGTGCAGAAATAATTGCATACCTAATATAATTCCTGTTTATGAGAGTGTGGAATTAGATGGATTAAGGATATCAGTAGTTAATATT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAGATTACCTATGAGGAATTGAAAC # Alternate repeat : ATTTTAGATTACCTATAAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 3 42315-44114 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJJPB010000009.1 Clostridium sp. WLY-B-L2 Scaffolds_9_116014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 42315 30 100.0 36 .............................. GTGACGACTAGGAGGTAGGGCAATGGATACAGGAAG 42381 30 100.0 36 .............................. TGAGTAATTGCATTTGATTATCCATAAAATCTTCCC 42447 30 100.0 35 .............................. TAAAGAAACTTTTTTCTGTCTAATAACCTATACTT 42512 30 100.0 36 .............................. TCCTCATAAGGATATACTTCTGTACTGCAAAAATTA 42578 30 100.0 37 .............................. AATTATCCCCTCCTTAAAGGAGAGAGAATAAAATCTC 42645 30 100.0 36 .............................. AAAAAATGTATGGTTTAGAGAAAAGGTAAATGCTGT 42711 30 100.0 36 .............................. TTATTTCTTTTGTGCCTGGCTAGGAATAATTTACCT 42777 30 100.0 36 .............................. GCGCCACCTCCATCAAACATGCCCATCTGGGAATTC 42843 30 100.0 35 .............................. AGGGTGCGCTGGAGAAGGTAGAAAATTTCCTTAAG 42908 30 100.0 34 .............................. TATGGAAGCCGTTCCTTCTCTGTACCACCTCTGT 42972 30 100.0 36 .............................. CAGGGTCGGTTTTGTAGTTCTCATATTCCTTTTTCA 43038 30 100.0 35 .............................. AATTCCTCCCTAAGTTCCCCTTCCATTTCAATTAA 43103 30 100.0 35 .............................. TAGTCATATACAATATTTTTTTCATCTGCACCACC 43168 30 100.0 36 .............................. TAGTTTAAAGAGTGTGAATATAGTTATTCACACTCT 43234 30 100.0 36 .............................. TATTCATACTTTGTTTTGACCGACCCATCTAAATCC 43300 30 100.0 34 .............................. TATATCCACAGAATAAAAACAATCCTTTTATAAG 43364 30 100.0 36 .............................. GTGAATTTACCCATTATATCTATGCGGATAAGGCTA 43430 30 100.0 34 .............................. ATATTGGCATCATCTTTAATTTTACTGTTATCAA 43494 30 100.0 35 .............................. ATTTCATCTAAAATAGAGTTTATTTCAGCTTTATA 43559 30 100.0 37 .............................. AAAAGATAAGACCATTACAGACTTTAAGAGTATGATT 43626 30 100.0 36 .............................. CCTAGAAAATATTCGTTTTGCGATCTGAACCACAAA 43692 30 100.0 35 .............................. TTATATGTGCTATTATACCCAAAAAATGAATCTAA 43757 30 100.0 35 .............................. TGCCTAAAAAGAGATTGCAGGAACATATACAGACA 43822 30 100.0 36 .............................. GCAAGTAATGATGCCGCACTGTATTTTTCTGTTCCA 43888 30 100.0 37 .............................. GTTAATACAGAGTTGCTTATTCCTTTTACATTTTCTT 43955 30 100.0 36 .............................. ATAGCTTGTATTACTTTAAATAAATTATGAGGTATA 44021 30 100.0 35 .............................. CCTTTAGATTTTTAACTTCAGATAATAGATTACTC 44086 29 93.3 0 .T.....................-...... | ========== ====== ====== ====== ============================== ===================================== ================== 28 30 99.8 36 GCTGAACCTTAACATGAGATGTATTTAAAT # Left flank : CTTAAAGCATATGATGTAAGAATTGGGGGCAGTGCTTTATGGCGAAAAATTTTAATTTCAATTACGCCTTTGTATTTTATGATGTAAATGAAAAAAGGGTGAACAAGATATTTAAAATATGTAAGAAATATTTTCATCACCATCAAAATTCTGTTTTCAGGGGAGCTATAACTCCTTCGAAATTGATAAAATTGAAAAGTGAATTGAACAAAATCGTGGAGGGAACAGATTTTGTAACAATAATAAAACTTATAAATGACAGCTGTTTTGATGAAGAAACTTTAGGAGTAAATGTAAATAATACCGAAAATCTGATACTCTGATTTTTCCAACCAAGTTGAATTTTAAAAGTGTTTCAATGTGTTGAATTGAAATGGATTGAGGCACTTTTTTTATTTTCTTTTAAAAAAATAAAAATGACTGGAAAACTTTTAAGAAAATGCTTTATTTATGCGGTTTTAAGGCATATAATAAAAATAGAGAATGGCTATTTTACATTA # Right flank : TAATAATTGATAGTACAGAAAATTCGGGATTACCAATCCATTTATACGACCCTTGTTTAGGATAACTGTAGTAGTATTTGTCACAGTTATAGCATCAAAATTGAATATGAATTGTACTGTAGTTTCAGTTGTGGGGATATCGTTAGTAATATTATATAATCTAGTAAGGTTTTGTTGTAAATGGAAAGAAAATCAAGTCGGAATAATGTACTAAAATAATTAGCTAAGAAATATTAGTAATCCATAACTGGTTGGCATACCATCAAAAAATAGTAACCCATTGCATTTAAGCATACTAGTAGAATAAAGTAAACCAGAATTAATGAGTGTGTTATGGATGGAAAGTAATCAAAGCTGTATAGTATTACTTGGCAGAATAATAATCTAAACTTCTAGTATCAAGTAAAGGATTTGTTGTGAATGGCAATCGGAGAAATAAGTTTATTAAGATGACATCAGAAGAGTTTAATACTTGCGTGGGGTTTGCCCTGCACAATGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 5787-255 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJJPB010000058.1 Clostridium sp. WLY-B-L2 Scaffolds_58_6275, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 5786 30 100.0 36 .............................. TATCGCAATGGTGTAAACCCAAATAACTACAGCTTG 5720 30 100.0 36 .............................. TGATTTAGATTGGAGTGAAGAATAATGCAGATAAAA 5654 30 100.0 36 .............................. CAACAGTAATTCAAAAGGCTACAGAGGGCAGTACCT 5588 30 100.0 35 .............................. TTGGCAATGTGGCTGCCTTCTCTATCGGCCATTTA 5523 30 100.0 35 .............................. TTTATAATAGGTACAAAGTTGTATTTACCTATCTT 5458 30 100.0 36 .............................. TCTATATCCATAAGCTTGGATAAACTTCTAGCTGCA 5392 30 100.0 38 .............................. TTGTACTGCTCATATAGGCACAATTAAAATATTATTTG 5324 30 100.0 35 .............................. CGGCAGCACTAGCAATAACAGGCACACCTATATCA 5259 30 100.0 38 .............................. TTAAAAAGCCTAATAAAAATATTTACAGATGAGGGAGA 5191 30 100.0 36 .............................. TTGTTCTAGTTCTAAATTACATACGGAAAAGGCTAC 5125 30 100.0 37 .............................. TAAAAAAATAAACCCTAGAATAGCTTTTAAACTATCC 5058 30 100.0 37 .............................. CCGTTTGAGGATTTGAAAGTCCTTTTAAAAAGCCCTG 4991 30 100.0 36 .............................. TTTTTTTATATAAAATTGGAATATTGAGAAGGAATA 4925 30 100.0 35 .............................. TGCTAAGTGTATGAGTAAAATAATATAGTAGTACA 4860 30 100.0 36 .............................. TTAGTTGGCTCTTTCTTTTTAATTCCATATGTACCT 4794 30 100.0 37 .............................. AAATAGATTCTGTAGTAAAACTAAAGAATGGTAATAC 4727 30 100.0 35 .............................. CCGGGGAAGAGTTGCATGGACACTTTAGAAGGTCT 4662 30 100.0 37 .............................. AAAGAATGGAAAAAGGTTTAAACCAAAAACAGTTAGG 4595 30 100.0 37 .............................. CAGAACCTTGTATCGTCCTTAAATAGCCAGTCTATAT 4528 30 100.0 33 .............................. TAGCTTGTATAATATCTTCTTGTTTAAGATTCA 4464 30 100.0 36 .............................. TAAGTTTTACGTAACGGATAAATAGATTGGATATAA 4398 30 100.0 37 .............................. GCCGATACAGGTTGATCTGTAGTCGAGCTAATCGGCT 4331 30 100.0 35 .............................. TATTTACCTGCATATCCAGGGAGTATACCGCTTAA 4266 30 100.0 39 .............................. CCGTGACTTTCTCTTTCAACTTTATTAGAATTATCAAAA 4197 30 100.0 36 .............................. TATGAAATTCAATGCTGATGTAATGCTTAGGGGTGA 4131 30 100.0 35 .............................. CATTCCAATCCATAATAACTAAATGATATATTCTG 4066 30 100.0 36 .............................. TAAAAAATGGATGGAAAGTATTCGGTGAAACCAACG 4000 30 100.0 37 .............................. TATGGATACAAATTATGTATTTGATATTACTCCAGAT 3933 30 100.0 35 .............................. CCCTATGGATATACATTCCAGCCATTGGCACTAAA 3868 30 100.0 38 .............................. ATGTCCTCTTTATCTTCTTTAGTAAATTCTTCTCCTTC 3800 30 100.0 38 .............................. AGTTATCTGTAGACGGTGGTAATATTCAATATGATAAG 3732 30 100.0 36 .............................. AGAAATTGTTTTGAGCTTAACCGTGATGGAATGTTA 3666 30 100.0 39 .............................. CACATTTCAATTTGGTTTTCTATAGAATCACCTTTGCCA 3597 30 100.0 36 .............................. ACAGGCTTGCAATTCAAAACTGTGCCAAAAATTCTA 3531 30 100.0 36 .............................. TCTCAAAGAAATTGCAAGGATTGAGTGACAGAAGTT 3465 30 100.0 37 .............................. AAAGCCTTTTGACAATCCATGCATAATGCTTTTCCGT 3398 30 100.0 37 .............................. TTTATGTCAGAATCTTCATCTTCTTCAAATTCAACCG 3331 30 100.0 37 .............................. TTTGTTATATGCTAGGGCACTAGGATTAAGTTTTTAT 3264 30 100.0 37 .............................. TCTGCCTCATGCGGGGGAATACACCCCATGGTTCAAA 3197 30 100.0 38 .............................. TTGCAAGACTGGTAGGCTCTAAAGATGGAATGGCATAT 3129 30 100.0 37 .............................. TTTGAACTATGCTGTTTATGTCAATCAATATCCATAT 3062 30 100.0 36 .............................. TTAGCCAACTTTTACCTAAATTCGGAAGTTCAACGC 2996 30 100.0 36 .............................. TAAGTTGTCAGTTGTCTTTGCTAAGAAATTGGCAAT 2930 30 100.0 38 .............................. CAGTACTTTGCCTTAGTTTCAAGTGTTTCTCTATTCTG 2862 30 100.0 38 .............................. AGATACAATATTTTGTTCTGGTCAGATTTCTTCCTATT 2794 30 100.0 35 .............................. TAAGTTACGATCCATTTGTCGTAGTACTCAGATAG 2729 30 100.0 36 .............................. TTAAATCTGCATCATAAATAATTAAATCTGCCAGTA 2663 30 100.0 36 .............................. TAACATAAAAAAATTTAGTTTTCTACAAGGCAGGAA 2596 30 100.0 36 .............................. ACGGTTATACAGTTTATACAACTGACGAACTAACAA 2530 30 100.0 36 .............................. TTCCAATTTTTCAGGGTATAACTATCCGCAATGTTA 2464 30 100.0 38 .............................. CTGGGAATCTCAAGTGAAATTGATGATGATGGAAATAA 2396 30 100.0 35 .............................. TTATATTACGATTTGCTAATTAGGGCAGACGATGA 2331 30 100.0 36 .............................. TTTTAAAGGAGGAATAGAGATATAGAGATAAAAGAA 2265 30 100.0 37 .............................. TGCCTAAGAAAAGATTGCAGGAACATATACAGACAGA 2198 30 100.0 38 .............................. CAGACAAACGGAAAGATAAAATAAAAGCACGTATGAAC 2130 30 100.0 37 .............................. CTTCTTTTAGTATTGTTGTCGGTATAACCGCAGATGC 2063 30 100.0 36 .............................. ATTGACTTATCTTGCTCCTGGAACGCCCCGACTTTA 1997 30 100.0 36 .............................. CAGTGTCAGAGGGTGCCACTTTTAACGGGAATATAA 1931 30 100.0 34 .............................. TTATCTGGATCAGGATTAGGAATAAATGCTTCAG 1867 30 100.0 35 .............................. TAAGTTTATTAAGGATATAAATGAGGAGTATTTTA 1802 30 100.0 37 .............................. TGTATATCAGTTCAAATTCCAGTATGGAGAAGACTGG 1735 30 100.0 36 .............................. AAGTCTGTGCCTTATCCTGTGCTGCCCTTAATTTAT 1669 30 100.0 35 .............................. CACACCAAGCGGCAACAGATAGAAAGAATAAGTTA 1604 30 100.0 36 .............................. TATTTCAGCCTATATTTCTCTTGCAGGTCTCTTAAA 1538 30 100.0 37 .............................. TTTCTATATATATCACCAATAATTTCACAGCTTGCGG 1471 30 100.0 35 .............................. AACCATGCGAAAACAGCATTTACCTTTTCTCTAAA 1406 30 100.0 35 .............................. AAATCTCTCATTAAGGATTTAAATTTACAAAGTTT 1341 30 100.0 35 .............................. CCTTTTGCAATGCAATTTCAAAGAAGAGGACACAT 1276 30 100.0 36 .............................. TAGATATAGACTGGCTATTCAAGGACGATACAAGGT 1210 30 100.0 35 .............................. TACCTTTATTTATTTTTCCCATTACAGTAAAGTTT 1145 30 100.0 37 .............................. TAATGTCACTTACCGTAACTTCTGGCTTATAATATGG 1078 30 100.0 35 .............................. TTGCAAGGGAATTCATAATTTTAAATATGATAGAG 1013 30 100.0 36 .............................. TTAGGAGGGCATATACACCATTTATTTATATCGTTG 947 30 100.0 36 .............................. TATTCTTATTCGGGTATCTAAAGTATAAGAAAATAG 881 30 100.0 36 .............................. TAAATATCATGGTGCTTTGTCATGCCGTGTATATAA 815 30 100.0 37 .............................. AATTCAAGTAAGTTCCTCCCTTCTGGTAAAATAAAAG 748 30 100.0 37 .............................. CTGAGAGGAGGGCTTGACATGGCAAGACCAAGGCAGC 681 30 96.7 36 ..................G........... TACTTGCTGTAGAATTTGCTGTGTCTATATTGCCTG 615 30 100.0 36 .............................. TGTTTTGGTTCTCCATATAGGCGTTTCATGGAGGCT 549 30 100.0 37 .............................. ACAGAAAAATCTTATATAGATACAGGTCTGGAACCTA 482 30 100.0 34 .............................. TACTTACTGCAGGAGTTGATGTCCAGGATGACAG 417 30 100.0 37 .............................. TAGATAGTAATATACCTGATGCCAAAATACCTGTTGT 350 30 100.0 36 .............................. TATTTTCCTAAATTTGTAAGTGCTATTTTTAACATT 284 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 84 30 100.0 36 GATTTTAGACTACCTATAAGGAATTGAAAC # Left flank : GGTGAAGTGTATTTAAGGGAAAGCATTATGATACTGTTTATCAACCTAACTATAAATCTACTAAAAAATTGTCTTGACAAAGGGGTGCACTTTAATGAGATGTATTTAAATGATGAACAAAATGAAATAGTATTGAGACTAAATGGTGCTGAACCTTAACATGAGATGTATTTAAATAACAACTACCTTCATCTTCTAGCTTTAAATTTAATTGTTGAACCTTAACATGAGATGTATTTAAATGAGAGAATATTGTTAAATCTTTTGGATATATTGGAGCTGAACCTTAACATAAGATTAGTTTAAAAAATATTTTGGAATTATATTAAATTTTATGTCGTCGACCATGAATAGAGTAAAAATTACCGGAGGTCGACGATTTTTATGTTTGCAGTTAATTAGCCGCCTGAGATTAATTTCTAAAACTTTTGTAGAAATATTTCTGAATATTGCATTTTTCTAGATGCTGATGTATTCTATATTTGATG # Right flank : CTCATATATTGAGGGAATGAGTATTTTTGTAGTCATTATTACATTGCTTTTTTACAACTGTGAACTACCACCACTTATAGAAGTGGATGGCTTCTTAGTCAATATTCCTAATGGAACAAGTTTACCTAAGCTCTAAAGGTCGAACCAACCTCAGTGTATTACTAAAATTATATGGCTAATTTCAGCAGATTTTTGCTGGCGTTTATATCCCTGTCATGGTGTGTGCTGCATTTAGGACAGGTCCATTCCCTGAGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTTTAGACTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //