Array 1 182583-179933 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUCW01000001.1 Klebsiella pneumoniae strain 171J9 contig_00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182582 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182521 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182460 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182399 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182337 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182276 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182215 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182154 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 182093 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 182032 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181971 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181910 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181849 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181788 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181727 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181666 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181605 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181544 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181483 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181422 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181361 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181300 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181239 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181178 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 181117 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 181056 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180995 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180934 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180873 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180812 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180751 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180690 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180629 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180568 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180507 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180446 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180385 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180324 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180263 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 180202 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180141 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 180080 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 180019 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179961 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //