Array 1 117660-118649 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHSL010000011.1 Serratia proteamaculans strain SER00238 SER00238_c0011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 117660 28 100.0 32 ............................ ATTAAACCCCAGTGCGAGCTGCAGCCTGGCAC 117720 28 100.0 32 ............................ AGTCGTGGAAGCATCCGTGCCCACTGTTCCAG 117780 28 100.0 32 ............................ GTGAGACAAAGCCGGTGGGGTACGTCTCTGCA 117840 28 100.0 32 ............................ ATCATTCAAATAAACGACATCCCTGCCATAAA 117900 28 100.0 32 ............................ AAGGCTTACCGCCTGTGGCTGGGTCTGGATAA 117960 28 100.0 33 ............................ CAGGGCGTAATTCATAGAACCGGCCCTAACGAG 118021 28 100.0 32 ............................ TGCACCGCCGCCACCTCCGCCGCGTGTTAAAT 118081 28 100.0 32 ............................ GAAATCGAAAAGGCCATCATGTCGCTATCGCA 118141 28 100.0 32 ............................ AGAATGCCACTCCCTGAACATGTGCATCCGAT 118201 28 100.0 32 ............................ ATGCACGCGCGCCGTTGCGGTCAACTACCAGT 118261 28 100.0 32 ............................ GACATCGGCATCTCTCAGGTCAACTACCGTTG 118321 28 100.0 33 ............................ TTATCCAGGGCGGATACGTACTCTTGCGAGTAG 118382 28 100.0 32 ............................ TTAAAGCAGATACGGGGAATCCTGACGCTGAT 118442 28 100.0 32 ............................ GCCATTTGGTGGCCTGTAACTTCCATGCCAGA 118502 28 100.0 32 ............................ TGCCGGTGACATGCAGCGCTCACAAAACACCG 118562 28 100.0 32 ............................ GCTATCGAAGCGCGGGAAGTGGAGAAGTTCGC 118622 28 78.6 0 ...........C........T...AGTC | ========== ====== ====== ====== ============================ ================================= ================== 17 28 98.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CCGAGCCGTTTAACCGGCTTTAACCTCAACGTCCGGCAGTAAATAATCCAACGAAAGAGGCGGGTGACTCACCAGCCTCTCTTTTTGCATTTTGCTCAGTTGCTTGACCCGATATTCCAGCCTCAGTGCCCTTGAACGATCCCCTGCCTGGCAGTGAAACGCCAGCACCAGCTCTCCTTTACCTCGCAGTGCCTTCGCACCCTTACCGGCCTGATGTTGCGCCAGCCGCCGAGCCACGTCGGTGGTGATGCCGGTGTACAGCATACCGCTGGGCATGCGCAGCATATAGAGGTGCCAGACACTGGTGTTTGTCATATAAGTCCCTGTAAATAATTGAGCGTTACTATAGGCAACCTAACTCCATCGCTGAACCCTTTTTTTGCGGTGTAATTTAATTTATTGATTTTAAATGTTTTTAATTGAGTGTGGGGAAAAAGCCTTTTTGCACCAATCGTGAGGTTACTCTTCAACAATCAGCTAATTAGCGCTAATCTCCAACA # Right flank : CCTATCAATAATGATATTTTGTCGGCTGGTAACGGTTTTCCCATTGTTGGTATGATAAAAACTTAAGTTGCTAGGTTAGTTGAATATATATTTTCTCTATTGACCAAGGTGGAATCATTTAAATTATGGATAATTCAAGATATGAGTAACTCATTCTCGCCGTCCGATTTAAAAACTATCCTGCATTCCAAAAGAGCCAATCTCTATTACCTGCAATATTGCCGTGTCTTAGTCAACGGTGGGCGAGTTGAGTATGTTACCGATGAAGGAAAACAATCTCTTTATTGGAATATCCCCATTGCTAATACCTCTGTTGTCATGCTCGGGACAGGTACTTCAATCACGCAAGCCGCAATGCGCGAATTTGCCAAGGCGGGGGTATTAGTTGGTTTCTGTGGTGGCGCTGGGACTCCTTTATACGCGGGCAATGAAGTGGAGGTTGCCGCTTCCTGGTTATGTTCGCAGAGTGAATATCGACCAACAGAGTATTTGCAACATTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 127039-127966 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHSL010000011.1 Serratia proteamaculans strain SER00238 SER00238_c0011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 127039 28 100.0 32 ............................ AAAGTTATCGGCGCTCTCCGGCGACGGGTAGC 127099 28 100.0 32 ............................ CTGTTTGTCGTACAGCCTGTTGCCACCGCAGC 127159 28 100.0 32 ............................ AACAAGTCACCAGGCAGGCACTTACCGCGCAG 127219 28 100.0 32 ............................ GTCTCCGCGAAGGCAAGCTGACGCTCTGGTAT 127279 28 100.0 32 ............................ TCGCCAACTGGAAACCCGTCGTTATGGTCATG 127339 28 100.0 32 ............................ GTCGAGAGCGGTAAGCACTTCGTTATGCTGAT 127399 28 100.0 32 ............................ TCACGGGTATCGATCGCGGCCATCTGCTTATC 127459 28 100.0 32 ............................ CAAGAAACGATAGTCAAGGCTGGCAATCGAAA 127519 28 100.0 32 ............................ AGACCGACATGCTTTGGTTCATCGCCGTAATA 127579 28 100.0 32 ............................ GTGGATTGTGCTTTCGCTGTGGTGCTGCAAGC 127639 28 100.0 32 ............................ TGATTATTCGGGTTCCGATACGTCTGCGCATA 127699 28 100.0 32 ............................ TACGTATGAACTGCGCAGCAACGCCATCAACG 127759 28 100.0 32 ............................ ATGAGCACCACACTAACAACTGTTGCCAGCGT 127819 28 100.0 32 ............................ TCATCGAAGCGAAATTCTTCGACGCTGTCGGA 127879 28 100.0 32 ............................ CAACGCTTGATTTGTTTTAGCCGGTTACGCAG 127939 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GACGTTGGCTGAGCTTCAGGAAAGCGGTTGGTTGAAAGGGTTGCGGGACTATACCGGCATCGGCCCCCTTCAGGCTGTTCCGACTGGGGCGCAACACCGAACGGTCAGCCGGGTTCAGGTCAAGAGCAGTGCAGAACGTTTGCGCCGCAGATCGGTCAGTAAAGGTTGGTTGACCGATGCTCAGGCCAGGGAAAAGATCCCGATGGCCAATGAACAACGCTCATCTCTGCCGTTTATTACGCTAAAGAGCCTATCTACGGGGCAAAGTTTTCGCCTGTTTCTGAAACAAGGGGAACTGCAGGCAGTACCGATAGAAGGAAGTTTCAGCTTTTATGGTTTGAGCGCATCTGCCACAGTGCCTTGGTTCTGACCCTTTTTTTCGGGGCGGAGATAACTGATTGATTTTATTATCTCTGCCCTATGCCTGAAAAATTAGGGTTAAAGCGCGAAATAACTACCATTTTCTTTAAGAGTCAGTTTGTTACAGGTTTTTTTGTACA # Right flank : AAGCCGGTCTGGATAATAATATGCAGCAACTTTGATAGCCAGGGACGGAATATGATGGCATGTTCTCCAGCGCAATCCCATCCCCGGCGGTCAATGTGTTACTGCTGTGAGCCTTTTTTCCCCACCATTTCGAAACGCGGTGAAACCATGCCGTACAGCGTCCAACCGAGGAAGGTGGCGATAGCGCCCCACATCATCGCTTCCTCACCTGAACTGTAGAGGGCATAGAAACTGTACAGTGCCCCAATGCCGGCAATGATGTTGGCAATTCGCGCTTTTTTCTCCGGTACTTTCGCCACTTTCTGAATGATGATCAGCGCCGCCATCGACAGAATATAAGGGATGATATTGGTCACCACCGCCAGATTCACCAGCACGTTGAACTGTTTATTCAGCGACGGGCTGATGGTCATCAGCGACAGCACGCTCTGGATCACTACTATGGTCAGCATGCCTTTGACCGGTGCATCGGCCTTGCTGAGTTTGGAGAAAATTTTCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //