Array 1 93029-93884 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCJ01000004.1 Microcystis aeruginosa NIES-3806 sequence004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================== ================== 93029 36 100.0 42 .................................... AGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTTA 93107 36 100.0 45 .................................... ATAAGGATTGCCATCCTTTTACGGCGACTTCATTTGGGAAGAAAA 93188 36 100.0 36 .................................... TCAGGATACGACAGGGGGGATGACCATGAAGCAAAT 93260 36 100.0 39 .................................... AAGATTTATACGACCGCCTCTTGGCGATGCCACCTGAAG 93335 36 100.0 42 .................................... AGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTTA 93413 36 100.0 47 .................................... GTACAAAGTTAAGCGGATGGTGCGTTTGATCGCATCATGCTGAATTC 93496 36 100.0 36 .................................... ATTCTGTGTGGGATCGCCGTGGAGAAGACTCCATGA 93568 36 100.0 34 .................................... CCCCTATGGCTCTATTAACGGTATGGTTTCTAGT 93638 36 100.0 34 .................................... TCCCTATATTGGGATGGGGAATATCACAAGCGGT 93708 36 100.0 33 .................................... TTGTTTATCAGTTCAATATCTTCGGATCCTTCA 93777 36 100.0 36 .................................... TGTTGCAAACCAAGCCGTAAAGTCCAAAATCCAGGA 93849 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================================== ================== 12 36 100.0 39 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : ATGATGTGGTGATTTATAGTTTAGATAATGTTACCATCGGCAGTCATTGTGTGATTTCTCAAAAATGCTATCTTTGCACTGGCAGTCACGATCCCGGCGATCGCTCTTTTGGCTTAAAAACCACTCCCATCCTCATCGGTAATGGTACATGGATCGCGGCCGATTGTTTTTTGGCTCCGGGGGTAAAAATTGGCTCTAATGTTGTTATTGGGGCAAGAAGCAGCGTATTTGCCGATATTCCCGCTCAAAAGGTCGCTTGGGGTAGTCCCTGTCGTCCTCAATACGATAGAAAGATGAATTCTTATAGCAGTTAAGCTAAGAGGCATTTTTGGCGGTCTTCCGCTCGCTTTTGTCCCACTGTTTCCCACGGGACATATTAAGCTGTTCGTAATTTAATTAGCATTTTTATCGATTTTTGTCAAGATATATTTAACATTTTTTATCTTGTTTATTTGACACAATTTATTAGAAAAAGGGTTTATAAAGAAACCCTTTTTCTA # Right flank : GAGTACCCCTTGGAAAGTCTCATCGAGAGGGGAAGACAGACCCCCAAATCGACGCACCTGCAAAAAGAGGGTTAAAAAGTGGTCTTGGGGGGGGTAAAAGTCCCGATACCAAAGGGTAGAACCCTGACTGGGAGAGCAATCGACGCACCTCAACCAGAGAATCGGGGTTTTAGGTCGGGGAGGGGGTGCATCGATTTTCAGTCAAGAGTTGGGGGACAAGCTAGATGATGTAGAGATTTGGGGGTGGTTGAGGAGGAGAACCTCCCATCACCAACAATCTAGAGACAGCTTCTTCGGAAATCCCATAGAAGCGCACATCATCCTCTTGAGGATTGACCCTTTCTACTACTTTAGCGTACAGTTTCCGCCTCTCGATGTGTAATTAATTTTGCTTAAGTAATTATCTGTAATTAAGTAGCTGGTTATAATTAAATTAAAAATGGATTTTAGGTTCGATCCCCCCTGCCCCCCTTGATAAGGGGGGTGCCGATAGGCGGGGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 14634-13664 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCJ01000038.1 Microcystis aeruginosa NIES-3806 sequence038, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 14633 35 100.0 34 ................................... AGGAGAATCATGAACCATAACACAAGAACCACTG 14564 35 100.0 37 ................................... CCCTGATTTGGTGGCTTGATCCAATCCAAAGCCACAA 14492 35 100.0 39 ................................... GAGCCCCCATTAAAAAACCAGGGGCAATCGTTTTATGGA 14418 35 100.0 37 ................................... CCCGAACCCGACGATGAAAAGGTCTTCCCCTTTATTA 14346 35 100.0 31 ................................... GCCGACGGCACCTTAGTGAGTTACCGATGGA 14280 35 100.0 41 ................................... ACTCTAACTTTCACTGTAAACTCCTTATACCTCAAAGAAGC 14204 35 100.0 36 ................................... CAAACTGTGTTCTGGAATTGGAAAAGAGAAATCTTT 14133 35 100.0 35 ................................... GGTGGTCATTGTCATTGGCGAAAGCTATGACAAGG 14063 35 100.0 35 ................................... AATAGAGAAAAACAAGGAATGTTTTAACATTCCTA 13993 35 100.0 35 ................................... TTGACAAGGCTATCTTAAAAAAAGTTGGAGGCAAG 13923 35 100.0 45 ................................... AAAAACCATATACAAAATTTTGTATATGGTTTTTAACTAAATAGG 13843 35 100.0 34 ................................... GCGCTATACTGCCTCTTGGCAGTAGCGGCAGTAA 13774 35 100.0 41 ................................... CTTGTTATAGGGTTTGTACGACTTGTAATCGTCTTGAATGG 13698 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================= ================== 14 35 100.0 37 GTTTCCATTAATTAAACTTGCTAAGAAGTTAAAAG # Left flank : CAGCACAGCAAATTTAGCACTGCACCACTGACCGCAGTTAATCGCAACTTGAGGATGTCCCCATGTGCCTTGTAGATTGGCTGGTTTCCCTCTTCGGATCTGAATCAACTTGGATATGGGAATTCCCATATCCATAGAAAGCTCATCTAGAAAGGCTTTCGTGATGTCAAGCCTTAAATAGTCTGCGATTAGTTTGCCATTAGCTTGCGCCATCTGGGTCAAGTTGATGTACCCATCCTCATGGCGCTGACCGATCTGTAAGCCGTCGGCTTCGTGAAGTATGATCTTCAATGTGAACCTCCTATTCAGGTTTACCGCGTTCGGGGTGTTTGCAGCACCGCCGAACATTTTTACTCTTGCGGCGATCATACCAGAATGTGGCTCTGAATTCGTTTTTTGCCGTTATGGGAATTCCCACCCACATTCCGCAAAATTGTAGGGTTAATTCATGAATTAACCCTACACATCTTTGACCTAATCCTGAGCTTAAAGCTCGTCTC # Right flank : ACTAGCTTGGCAAAACTAGGCTGTATAAGGATTGTACAGCAATTTTTCGTGGGATATTGAAAAGCATAGACATTATTAATAATAATTCTCAATAGTTACCTCAGTCATAAGGCTCAAAGTCTTGCTGGCCAAGGCATCGACGCACCTCAACGAAAACTCTAGATTTTCAGGCATTGTGTCTAACCCGCGAAAAATGTTGAGAACCCCCCCATTCCATCGGCATAAAACAATAGAATTTGTTCCACGCTAATGCCTATGCGATCATTGCCCTAGTACCATCTCACCTTTATAACCCTTAAATCTTTACGTCAAGCTATTTTGAAAGCCTTGCTAGAAAACAGTGTTAGGACAAGTATAATTACTCACTTGCATAAATGAGATGCTCCCGATATTTTAGTTGCTTTACCTTAATAGCAGCAGACTCTGGTAGCTCTCTATTTGTTGCTCAGGGTTGATCTCTCATCATCCTTTCGGTGTTCGCATCAGCACTCCGATTTTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAATTAAACTTGCTAAGAAGTTAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 32174-30086 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCJ01000038.1 Microcystis aeruginosa NIES-3806 sequence038, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 32173 35 97.1 38 .C................................. TGGTATCCAAAGTTTGGAAAGGTGTACAGTGTTTTGAC A [32168] 32099 35 100.0 40 ................................... TTTGCAGCCGCCATCATTCTGACCGTATGGGGAGGCCCAT 32024 35 100.0 38 ................................... GCTGTCCTTGCCAGCATCCCAATCCCTTCTCGTATCGT 31951 35 100.0 38 ................................... AATTTAATTGATTTTTTTGATAGTCCACCCATACCTTA 31878 35 100.0 35 ................................... CCTGAGAAACACACGCTGTCACTGACCCTTCCGGT 31808 35 100.0 40 ................................... GCTCCACAAATGCTTTCCTTGACGGGGAAGTTGGTGTGGT 31733 35 100.0 39 ................................... TTGAATGGACTATATGTGTCCAAAACGCGATACGCGGAA 31659 35 100.0 40 ................................... GATCATGTAGGAAACGCATAGGATGCACCACGGTGTATCC 31584 35 100.0 38 ................................... AAATCTATACCACCATCGGTTTAACTGCTGCTGCTACT 31511 35 100.0 34 ................................... GCGGTAAGTTTAAGTTGTGCAAATCGTACGCACG 31442 35 100.0 40 ................................... TGCTAAACTTCGCAGGGTTCGCCTTGGTAGTAAAAAACGA 31367 35 100.0 40 ................................... ATGGTCTAGAGGAATATCTAGAATACACGGCCATTACTGA 31292 35 100.0 38 ................................... ATTCAATTCAATGTGTAGTGCTTGAACAAGAGGTCACG 31219 35 100.0 35 ................................... GAGATAAGGATGCCTTAGAACTCGCGGTTTTTCAC 31149 35 100.0 33 ................................... ACTGCAGCTTGGGCGACAAAGGGAATTTTGTTG 31081 35 100.0 44 ................................... GGTTCCATTTTGGAAACCTGGATCACGGGTAAAGCCTACCAGGG 31002 35 100.0 46 ................................... GATCGCTCTCATAATGGCAGAAGCACTGCCTGAAAGCCACCACAAG 30921 35 100.0 34 ................................... CTCCTTATAGGAGGCACGGGAGCAGCTTGGTGGG 30852 35 100.0 38 ................................... GGCGATAAAAATAGATGAAAACAACGTCTGGACCAAAA 30779 35 100.0 34 ................................... GTTCGCGATTAACCTATGGGGCAAAGCTGAAAAA 30710 35 100.0 36 ................................... AAGGCAGAATTGTTTTGGCTTTAGTTTGTTTAACTG 30639 35 100.0 40 ................................... TAGCGGTCGGTGGAACCTATGGTGCCAAGGGGTTTAATTT 30564 35 100.0 38 ................................... AACATTTTAAGGATCACACCTTGCCTATCTTTGAATCC 30491 35 100.0 41 ................................... TCGAAAGAAAGGGGTTTGTGGGGGTTAATCTCCAAAAATAA 30415 35 100.0 37 ................................... ATCGTTCGTACGGATGCATGGCGTATGGCCTATGCTC 30343 35 100.0 40 ................................... CCGCTATCCAGCGGTGGGATGAGTATAAAGGCGTTAATAT 30268 35 100.0 38 ................................... GCACAAAAGTCCTGGGTGCCGCGGTTGCATTCCAGGCT 30195 35 100.0 40 ................................... TCTCTATAAGGCCATGGTGGTTTCGTGGTCGCATAAGAAT 30120 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================== ================== 29 35 99.9 38 GTTTCCATTAATTAAACTTGCTAAGAAGTTAAAAG # Left flank : GAATGACTGAAAAAGTTACCCACTCTCAAATTTCATCTCAGATTTCTTACCGAGAAGCCATTCAATTACAAATTCGGCTGTATAAACGTAGCTTGCTGTCATCTATAGCCTATGAACCTTTCTTTCGAGCCTCCTAATGTTAGTATTAATTGTTTACGATATTCCGGACAATAAAAGACGCACTAAATTATCTAACTTTCTGGAAGGATACGGTAAAAGAGTACAGTTTTCTGTGTTTGAGTGCTTTTTATCTTTAGCGGAAATGCGAGAACTTTATGAAAAAGTCAAAAAAAAAGTTAAACCAGAAGAAGATAATGTTAGATTTTATTGGCTCTCAAAAGATGCTACCTCAAAAACTTTAACTATCGGTAGCAAACACCCTGAACCCCCTCCACAATATTATGTAATCTAGAAAAAACAAAATCTTATCTCTCACCTTTATTAGTAAAAAAATCTCCTTAGAAAATTAAAGTAGGAGATTTTTTATTCACTAATCGTTA # Right flank : ACTAGCTTGGCAAAACTAGGCTGTATAAGGATTGTACAGCAATTTTTCGTGGGATATTGAAAAGCATCGACATTATTAATAATGATTCGCAATAGTTACCTCAGTCATAAGGCTCAAAGCCTTGCTGGGCAAAGCATCGACGCACCTCAACGAAAACTCTAGATTTTCAGGCATTGTGTCTAACCCGCGAAAAATGTTGAGAAACCCCCCATTCCATCGGCATAAAACAATAGAATTTGTTCCACGTTAATGCCTATGCGATCGGGAGCATCTCACCTTTATAACCCTTAAATCTTTATGTCAAGCTATTTTGAAAGCCTTATTGGAAAACAGTTTTAGGACAAGTATAATTACTCACTTGCATAAATGAGATGCTCCCTATGCGATTCCAGCTTTAGCTTATCTAGTGTGCAAAGCTAGTTTTTGAATATCTTTTTGTCAACTTCAACCCTTAAAGTATATCTTATATTAATTTATGTCCACTTTATATATAGTAGAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAATTAAACTTGCTAAGAAGTTAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 136-1474 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCJ01000090.1 Microcystis aeruginosa NIES-3806 sequence090, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 136 37 100.0 34 ..................................... ATTGAGAATCTGATAACTGAGAACCTCACCGGTT 207 37 100.0 36 ..................................... CCTATCGCTCGACAATCATCCGGGGTGAGTGCTATA 280 37 100.0 33 ..................................... TGATTTAATGCGATCGAGTGCCAATTCTCAAAG 350 37 100.0 34 ..................................... AACCCTGTATCAATTATGCTTCTATGGGCATACT 421 37 100.0 37 ..................................... GAGTTTAAAGGGAAAATCCGGGCTTCCGTTGCTCCGG 495 37 100.0 34 ..................................... ATAGCAAGGCTATCTCACACGCCCTAGGCCGCAG 566 37 100.0 36 ..................................... ACTACCCGTGGCTCGATCGAATTTCGAGCATTAAAG 639 37 100.0 36 ..................................... CTGCTTTTGATCGATAAAGTGGCAAAAAAATTTACT 712 37 100.0 35 ..................................... CGGCGTGCGATCGAGCGCACGGGTAAGCTTCTAGG 784 37 100.0 37 ..................................... ATCGGCTTAAGAATATAATTCCAGCGATTGCCATAGC 858 37 100.0 37 ..................................... ATCGGCTTAAGAATATAATTCCAGCGATTGCCATAGC 932 37 100.0 34 ..................................... GCGATAGCCTTGCCGGGCATCTATTCAGGGTATA 1003 37 97.3 34 ....T................................ TCCTTTAGTTTTTTGATGTTTTCCGACTCTGATT 1074 37 100.0 34 ..................................... AAATGATTGGATACTTAGGAGTGATCGGCGCCTA 1145 37 100.0 39 ..................................... GCCTCATCAACGATCGCCTGTAAAACCTCACCAATAACC 1221 37 97.3 36 ..................T.................. AGGGTCTGGCCGGGGGATACGGCTTTAAAGTAGAAG 1294 37 100.0 36 ..................................... ATCCCTCTATAATCAAGATAAGGAGAAAACTTCCAA 1367 37 100.0 34 ..................................... ATCCCCCAACTTCTCAGACTATCCCCCAACTTCC 1438 37 91.9 0 ..................................TGG | ========== ====== ====== ====== ===================================== ======================================= ================== 19 37 99.3 35 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TTGAAAAGTTCTGGGCTAGATTGAAAAACTATGTTAGTCAGATTATCAATGATAGTGAAAACCTTGTGGATGCTGTGAGTAAAGCCTTCAGGCATCTGTCCTAACTAACTCGTTCTATGCCATATAAATAATCTGG # Right flank : GGGAGAGTATCAGGGATTTTAATCTGTTCCAATTATGGAACAGCAACACCTGTAATCCCCCATTCCCCTGATCGGCAATTAGGTAGGCATCAAAGACGGCTTCGGCACTTCTGGAAGTTAACTGCAAGTCCTCTAGGTTTAGGGGTTGCGCTTCGGCATCGTAACCTAACCGATGGAATAGGGACGCTACCCCATCGGGGCTAGTTAAAGTCTTTAAATCGTCTAGTCGTAGTAATCGTTCCGGCATTTCCCCAACTTCCAAAACTGATTTCGATTATTTCTCTTAGGCGATCGCCTACCCGCCCTTTGGTGATGGATCAGCAAAACTATCGATTATTATCAATGCAATTGTCAAGGTTTACCACCTATCTCTAAAATGCCACGAATAGCGGTCAATACTTCACTTTCTCTCACCGGAAGTAAAGTAGTACAGAGTTATCCCTTAGTAAAGATGAAGGGGAACTATAGTTAAGAAAGGGAACTGGGAATCGGAACGATGA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //