Array 1 1437652-1432375 **** Predicted by CRISPRDetect 2.4 *** >NZ_LS990887.1 Corynebacterium senegalense strain Marseille-P4329, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1437651 29 100.0 32 ............................. CGAACTCACGCTCGTCAGGCAGCTCCTCCTCC 1437590 29 96.6 32 ............................G CTTGCCGAGGCTGCGTGGAACACGATCAAGTC 1437529 29 100.0 32 ............................. ACCTTCCACCAGTTCTGGCCTTGCTGGGCCTG 1437468 29 96.6 32 ............................G ACGATGCAGGCGAGCAGCGATACCTCCGCGTT 1437407 29 100.0 32 ............................. TGATGGTGACCGGGGCGGACATGCTTGTGTTC 1437346 29 100.0 32 ............................. TCAAACGACGAGCACGCTCCCGCATCGCCCGC 1437285 29 100.0 32 ............................. TGGGAGTTCAACGCACCCACCGCTTCGACAGC 1437224 29 96.6 32 ............................G TGGTACTGGGAGAATGTTACCAAGCCGACGTG 1437163 29 96.6 32 ............................T ACATCCCAGGGGAATCCGGCCCCCGGGTCTGT 1437102 29 96.6 32 ............................G GCCACTGGCCCCGTGTTCGGCGCGATTACCGA 1437041 29 100.0 32 ............................. TTCAACAAGCTCGACCTGCTGACCAAGCAGAT 1436980 29 100.0 32 ............................. TGCTGCTCCAACGGATGGCGGGTGAAAATGTT 1436919 29 100.0 32 ............................. CGTCTGCCACAACCAGTTAGCGGCGGCGGCGA 1436858 29 100.0 32 ............................. CTCCGATTCCAGACCTACCGATTCTTCTACCG 1436797 29 96.6 32 ............................T ATCGAAACCGATAGGGCCGTGACGGAAAGTAG 1436736 29 100.0 32 ............................. GTGATCCGCTCGATGTTGGTTAACGCCTAGTC 1436675 29 100.0 32 ............................. TGTCCGGCCTGTATATTCAATCGCCCCATGTT 1436614 29 100.0 32 ............................. CCCGTGGACAACATCCAAGAATCAATTAGCCA 1436553 29 100.0 32 ............................. GAACACACAACCCGTGGGCAACTTATCCACGG 1436492 29 100.0 32 ............................. CCGTGGCGTGGCTGTAAAGACGCGCTTAGGAA 1436431 29 100.0 32 ............................. CAGTACACCAACCAGCGCAGCATCGGTATCGA 1436370 29 96.6 32 ............................G ACTCTGACCATTCTCAACAACCTGCCGTTCGC 1436309 29 100.0 32 ............................. GCGACGCGCACAAGATCCTCAACAATGTGCTG 1436248 29 96.6 32 ............................G GCGTGGACAATGCTAGCTGGTAATGCAGATGA 1436187 29 100.0 32 ............................. GACTTGCCGGGCTTGTAGGTGATCTCGGGGTG 1436126 29 96.6 32 ............................G ATCAGCGTCCCCCCCGGCTTGAGTACGCGGAA 1436065 29 96.6 32 ............................G TGTGCAGGGGATACCCCGCGCGGTGATGGTGT 1436004 29 93.1 32 .................A..........G ACCCCACGCGGCAGCGGCACCGCCGATGGTTG 1435943 29 96.6 32 ............................G TCAACGAGCTCATCGACCGATTCAACCGCTAC 1435882 29 100.0 32 ............................. GCAGTTGTAAGTCGCTGACACTCGCCCCGCTT 1435821 29 100.0 32 ............................. TTGGCAACTGCGTTCCACGCAGAGCGGATGCC 1435760 29 100.0 32 ............................. GTACGGCGGAAATGCTCCTCAGTCGGCCCATC 1435699 29 100.0 32 ............................. GCTCGGGCGGGCTGGGCCAGGACGTGGGAGGC 1435638 29 100.0 32 ............................. TCCGTGATCCGCGCCGACCGGGTGCCGTTCCA 1435577 29 96.6 32 ............................G CAATGATGGGAGAAGGAATGACTACTAAGGTT 1435516 29 100.0 32 ............................. TCCTGGCCGACGACGCTGCTTGTCGACGGGCG 1435455 29 100.0 32 ............................. CACGCGGCGGCGTCCTGGGTGCGCGCCGCGGC 1435394 29 100.0 32 ............................. AGTTGACCAACCTGACCGAGCACTTCGACTAC 1435333 29 100.0 32 ............................. AAGATCACCCTCATCAAAATCACGCCCAGGGA 1435272 29 100.0 32 ............................. TGAACGAGTCCTCAAGGATCTTCATGACGGGC 1435211 29 100.0 32 ............................. TCGGCCGCCCCGTCTCCGGCAACAACGTCCGC 1435150 29 100.0 32 ............................. GATTGGGTCTTGCCCGTGAGCGCGTCCAGGTC 1435089 29 100.0 32 ............................. CGTCGATCCCTACCTGCACTGTCCACACGGTC 1435028 29 100.0 32 ............................. CCGTGTGGGTGTCGCCGTCTTCCGTGAGGATA 1434967 29 100.0 32 ............................. TTGGCAACTGCGTTCCACGCCGGGCGGATGCC 1434906 29 100.0 33 ............................. ACGCTCCCCCCGTCACCACAGACAACGGGCCAG 1434844 29 96.6 32 ............................G GAGGAACCGGAGATGGTGATGGTGCGTCCGCC 1434783 29 100.0 32 ............................. AACCTGCCGTTCGCGGGCGCGTAAGGAGATAC 1434722 29 100.0 32 ............................. ATAACCCTATACTTGGCCCCGCAATCAACACC 1434661 29 100.0 32 ............................. AGTTCGTAGGTGTCACGGTCGAGGGAAATAGT 1434600 29 100.0 32 ............................. TGCAGGTGCGCCGTACTCCTCCTCGGGGTGGA 1434539 29 96.6 32 ............................G GAGCATTGAGTGCAGCAGCAACATCCGATAGC 1434478 29 100.0 32 ............................. GTTCCAGGGATGATCTGCAGCAAACCAACACC 1434417 29 100.0 32 ............................. GGGCCGCCGTTGAGGATGTTCGTCCACCCATC 1434356 29 100.0 32 ............................. GTTGCGCCCCGCGAGGTACACCGGCACACCCG 1434295 29 100.0 32 ............................. GCCGCGGCGAGCGTACTTGTCCATCTCGGAGG 1434234 29 96.6 32 ............................G TTGGAGGCGGAGCGTCGGCGTGTCGCTAAGGC 1434173 29 100.0 32 ............................. GTCGGCGGCCTGCTCGTGGCCTCGGGCCGCGC 1434112 29 96.6 32 ............................G TGGCGCGGCATGGAAGATGATCCGATTCGGGC 1434051 29 96.6 32 ............................T GCCACTGCCGGGCTGATCGATTTCGTATCGCA 1433990 29 100.0 32 ............................. GGGACTTCCTTACCGGCGTTCTTCCACGTCCA 1433929 29 100.0 32 ............................. CGCACATCGACAAGATCGCCCTCATCAAAATC 1433868 29 100.0 32 ............................. GGCCCGCCTCATCAAACCGGCCCAAATCAGGG 1433807 29 96.6 32 ............................T AGCCAGGCGCGCGTCGGGGGTTGTCAGCGCCC 1433746 29 100.0 32 ............................. TCCGGAGTCGTCACCGCAGCACCGGCGGTGAC 1433685 29 100.0 32 ............................. GTTCCGGCGTTGATTGCCGCGAGGATCCGGTC 1433624 29 100.0 32 ............................. GAAATCAGTTCGTCGTGGCACGTCACACCCAG 1433563 29 96.6 32 ............................G ATGCCGCACCCACCGAAACAGCGAAATCTCAC 1433502 29 100.0 33 ............................. GCGGCCCTATCGGACTCGGTAGGTTCGCCAGTG 1433440 29 100.0 32 ............................. GCCACCGTCGTGGTCGATCACTGGAACTAGGC 1433379 29 100.0 32 ............................. ACCGAGGTACCCTGCCACGTGCTGTCACGCTG 1433318 29 100.0 32 ............................. CGTTGGTTCGCTAGGCGTGCTCCTTCCGCGAT 1433257 29 100.0 32 ............................. CATCAACCGGGACATAGCACACGCAATCCTCA 1433196 29 100.0 32 ............................. ATTCTCGACATGTCCGTGACCTTGCTGGTGTC 1433135 29 100.0 32 ............................. AAGTACATGTCGTGGGGCCGGGAACGTGAACC 1433074 29 100.0 32 ............................. TCGTGCCCGTTCTTGCAGTGCGTCTTTAGCTT 1433013 29 100.0 32 ............................. GCACGCCAGCATTACCGCCGACAAGGACAGCC 1432952 29 100.0 32 ............................. ACAATGACCGCAGCCAGTCCGACTACGGCCTC 1432891 29 96.6 32 ............................G AAGCGGTGAACGTCGCGGCCAGGGGTGAACCC 1432830 29 96.6 32 ............................T CATTCGTCTCTCCTAGCAGGTCAAAAATGCTG 1432769 29 100.0 32 ............................. ACCACCGCCGAATACATCCGCTACAACCCCGG 1432708 29 96.6 32 .........................A... GACCTGGCGGCCAAGATTGACCGCATTCACCA 1432647 29 96.6 32 ............................G GCCGGGTGGAACGTGGCGACGATGTTCGCCCC 1432586 29 96.6 32 ............................T CGGTCCGGGTTTGTGTAGAGGCGGCGCGCCGC 1432525 29 96.6 32 ....C........................ TCGATGGGGTCGACGGTGACGCGGCCCGTGAC 1432464 29 93.1 32 T...........................G GAGTCCACGAAACGGAGCGGCTCTTCACGCCA 1432403 28 82.8 0 ..............A..A...-...A..A | T [1432378] ========== ====== ====== ====== ============================= ================================= ================== 87 29 98.7 32 GTGCTCCCCGCGCAGGCGGGGATGAGCCC # Left flank : CCCGAACACGAGCTTTACTCAGACGCGGAACTGATGCTATGGAGCGAACTCGAAGTAATCGCATCCGGTGTCAACTGGGCCGAAGAAACGGCCGCGCCGTGATCGTTCTCGTAGTCACAGCATGTCCCGCTGGTCTGCGGGGCGATCTTACGAAATGGTTGCTGGAGATCGCACCCGGCACTTTCGTGGGGAACCCGACAGCACGGATCCGCGACCTCCTCTGGGAAAGGACAGTCGAACTCTGCAAAGACGGGCAGGCGCTGCTGGTGCACAGTTCAGACTGTGAGCAGGGCATGCAATTTCGCACCCACCGGCACCAATGGGAGCCAACCGACTTCGACGGGGTCACACTTATGATCCGCAGGAACAAATCTGCTCAAGCTGGTCGGCGAACTGGATGGAGCCGGGCACGGCAACAACGACGAAAGTACTACGGCCGCTAACAACAGGAGTTGAATCTGAATCATGGAGACCAGTAATATTCCTGCTGCTCAGCGAGA # Right flank : AACGGCAAGGTAGAGCATGGATCCTCTTTCACAGTGACCAAGCTGGCATGATGTCGCCTTCTACCGGGACAAGGCACCGTCATTCTCATCTGGACGGTCGTGTCTCGTTCCCAGCCCCTCCATGCATTCACGCCACACCCTCGTCGCTTTTAGTACAGCATCCCCGGACGCAGCCCATCTCTTTCTACTTGGCCTCCTTAGCCGCTATCAGTGCCTTTCGGAGCGCATCATCAACTGCGTAAATGTAAAGTCCCTTGACGCCGCGAGTGAGGAGAACGTTGAGTTCGTTGTTTATTAGCTCCTCACCAAAGGATTCTTTTCGCCCGTCGGAAAGTGTTCGGCGTTGAGTCTTCTTCCCGTGCGCGGACTTCGTCGGATCGATCACGACCCGGCCGTCCCGGTACGTGATTGAGGGTCCTAGAATCACCCCCGCGTAGTTCAGGTCAAATCCTTGAATCGTGAAGGTGGATCCCACTTCATTAATCGTTTGGGTATTTTCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCAGGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCAGGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //