Array 1 206858-205087 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXJX010000009.1 Paenibacillus sp. GbtcB18 B18_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 206857 33 100.0 33 ................................. CTACTCCGGCGAACGGTATAAGTATTATGTGCG 206791 33 97.0 33 ................................C GCGCGTAATGATCACACTTGAACAATTAAAGGA 206725 33 97.0 33 ................................A CCAAGGAGGTTTGTTTACTTTGACTCCGAATCA 206659 33 97.0 34 ................................C AATAAGGGCTACTCGTTCGGTGGGAAGAATTCGG 206592 33 97.0 33 ................................G CGTCTGAAAAGTCTTTAACCGTGTATCCCATAT 206526 33 97.0 32 ................................A GTCCTGCCGCCCGCATACGCCTCTCGTTCGAC 206461 33 100.0 34 ................................. TTCAGGATCAGCGCGTATATGGTCTGAGTCGCTA 206394 33 97.0 33 ................................C GCCCTTGCAGGGTAGCGATACCCTCCGTGCTGG 206328 33 97.0 34 ................................A TTAAGCGAACTCACTAAGATTTCGGATAATTTGG 206261 33 97.0 34 ................................A CCAGGTAGTAAACACACCCGGTAACCTGCGTGTC 206194 33 100.0 33 ................................. GTCATGCTTTCGAGACCACGCTCTACAAAATCT 206128 33 97.0 32 ................................G AACCAGGCCCAGCACAAATAGCCGGTGTCCAC 206063 33 100.0 35 ................................. TGTATCCCGTCTCATTGCACATGATCGAATCCGTA 205995 33 100.0 32 ................................. GTGGGAATTCCTGTTTGATACTTGTAGTACGT 205930 33 97.0 34 ................................C ACGTTACCAGCAACCCCGTTAAGTTTCGTATTGG 205863 33 97.0 35 ................................C TTGCGGGACTAAAGCCAGTTTCGAAGGTTGAAGAA 205795 33 97.0 34 ................................A CCTCTTCCGAGGGTTATGTGTCTAGGGTATCAAT 205728 33 97.0 36 ................................G TTCGTAGATATGAGATTCGCTCGGAAACTATCCGGG 205659 33 97.0 33 ................................G TATCTTTGAATCGCATTAGCAATAAATGTTGCA 205593 33 93.9 32 ....T...........................C GGGAAGCCCCCCGGAAGAACCGGAGTATCCAA 205528 33 100.0 36 ................................. TCGAAGTCGCTGCCGTTCATCTCGGCCGCCTCCCTC 205459 33 100.0 36 ................................. GGAAAGGCTGCGGTTCGGTTGCCCCATGTCTTCCAG 205390 33 97.0 33 ................................A TTAGACAGGCTAAAAGCGAAAGCAGCTATCAGG 205324 33 100.0 33 ................................. AAAGCAAGTGGTGTCAATGACTCGGTGTTTGGT 205258 33 100.0 37 ................................. TGCTGAAAAAATGGGAACTTCATTTCCTTATGTTGCA 205188 32 81.8 37 ......T.........-...AC........G.A GCATTCATGGCACGCTCGGCAGGGGCAAATCCGTTGT 205119 33 81.8 0 C.....T............A....T.....C.A | ========== ====== ====== ====== ================================= ===================================== ================== 27 33 96.8 34 GTCGCACCCCTTACGGGTGCGTGGATTGAAATT # Left flank : CTGGATGAATATCCTCCATTCCTGTGGAAGTAGGTGCAGCCTATGCTGGTATTAATCACTTATGATGTCAGCACGACAAGCGGAGCGGGACAGCGTAGGCTACGAAAAGTATCGAAATTATGCCAAAACTACGGTCAGCGTGTCCAGAATTCCGTGTTCGAATGCGTTGTTGACGCTGCGCAATTTGCTGTGTTAAAAATGGAGTTAATTGAAATTATCGATCCGAATGAGGATAGTCTAAGATTCTATCGACTAGGAAATCAGTATAAGACCAAGGTAGAGCATATTGGCATTAAGGCATCGCTTGATCTGGAAGGTCCGCTGATTTTCTAGTGCGAATGGGAAGTGAACATGATTTCCCAGGGGGATTCGCACCGGATATTATCCAGAAATAAATTGTTTAAACATAATATGGTATTTTATATTCGGGATAGAAGAGTTAAATTCTAGTTTATTTTTGGCAGTAAGCCGTTTTGGCCATTTATTGGTTAAAAAACGGT # Right flank : TCCAAACAAAGCACTGTAGTGAACGGTGTCACGTCGCATTGTCGCTAGACTAAAAGGTGGACACTTAGAGCCAAAGTTAAAATAGATGTAATATCTTAATTCGGTGTCCAACACGACTAAAAAGCACGACAAAGAATCCAAAATGCAAACTACTCGGCACCTTCAAGAAGAAGGAATGTAGATGGCGAAGGCTGTCTTATCGAGAAGTTCCTCCAGTACTGGCCGCTTTAACCAAAAAAGAGCTCCAGAGTCTCAGACAAACTGAAACTCCGAAGCTCTTTCTTTTTGTGCGGATTCTTTTATTTCTGAATCAGGGTGATGCGTGCGGTTTTGGCGCTGCGCGGAGGCGGGGGAGCGTCCGGATTGTTTGTTGTGACTTGAGTCTCGACGTAAAGCTCCTTGTTCCCGCTAAACTGGTAAACCAGCATATAAGAGTCTTCCATCGGGTCCCAGCCTTCCTGCCAAGGTTTGCCCAGCCGGTCGATGACTTTTTGCAGGGT # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.46, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTTACGGGTGCGTGGATTGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 216798-215419 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXJX010000009.1 Paenibacillus sp. GbtcB18 B18_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 216797 33 97.0 36 ................................C TCAACATCAATTACCCTAACCCCATTGCGAGCGCCT 216728 33 97.0 36 ................................C TCAACATCAATTACCCTAACCCCATTGCGAGCGCCT 216659 33 97.0 34 ................................T TCGGCCCAGTTTGCCAGGTAATCTTCAGCCTGTT 216592 33 97.0 35 ................................T AATTCGACCACATATTTAGCGAGTTCTTTTTCGGC 216524 33 97.0 35 ................................A TCCGTAAAACTGCGTTTTTCTCCCTGGGCGGCCTC 216456 33 97.0 36 ................................T TTTCAGTCAGCATACGGACTATGATTTTTTGAGCCG 216387 33 93.9 32 A...............................T CTATGAGGATAAGATCCTTATTGGAAATTCAA 216322 33 97.0 33 ................................A TGATGTAACAAACCGCATGAAAAACTCGATCTA 216256 33 100.0 32 ................................. ATGTAACACAGAAATACATGGGAGATACCAAA 216191 33 97.0 33 ................................A TTCATGCAAATTAAATTGAACGAACAAGTGTAT 216125 33 97.0 36 ................................A CCAAGCTGCCGAAAGCAATGGGGAGTCTTCTGGCGG 216056 33 100.0 32 ................................. TTTGAAAGCCTGCGAATACTATTTAAGCCGGA 215991 33 100.0 35 ................................. AAAAGGCTCTCGATCAGCGTGGAATATCATCCCTT 215923 33 97.0 37 ................................T CGTTCCCGATGCAATGGTACATCGACAACATGAACAA 215853 33 97.0 34 ................................T CGTATCAGTACGACCGTTGGAATGTCATCATCAG 215786 33 100.0 34 ................................. CAAGGGAATTATGCGTCGCGTGATGATCTCCTAC 215719 33 97.0 35 ................................A ATGTCACTCCGCAGGTAATATGCAAGAAGGCAAGC 215651 33 100.0 33 ................................. TATGGGCTCTTTTCGGAAAAGACAGCCAAAACC 215585 33 100.0 35 ................................. GAAGGCTACACACCAACATTTGATCAAGTGGCACA 215517 33 100.0 33 ................................. TAATGGACTGAAAAACAAAAATACCCCGGCCTA 215451 33 84.8 0 .....C...............CTA........T | ========== ====== ====== ====== ================================= ===================================== ================== 21 33 97.3 34 GTCGCACCCCTTACGGGTGCGTGGATTGAAATG # Left flank : TGGCATTCGCCTCAGTAAAACAACCTCGGATAAAGTTACCGTGAATTCGACCAAAAGGATGGGTACCGGTATTTCGTACACGATTGAGCTAGTAAAAAATGAAGATACTTGGAAAGTAGAGAAAGTGACAAAAACAAGTACAGGCAAGTAAAACAGGGTGCCGGATTATCTTAATCTAATGTGCCGGGCCATTATTAAAAAAAAGGAGCTCCGCAATCTCAGTAAATGCTTTGTTGTCACTGAACTATATGCTATGTTAAAAATAAAGATAATTATAAAACCAAGGTAGAACGTATCATCGGCTTGATCTCGAAATTCTGCTTTTCTCTAGTGCGAATGGGAAGCGAACATGATTTACCAGGGGGATTCGCACCGATTATTATCCACAAAAAAACAATTTAAACATAATATGAAGTTTTTTGTTTGGGATAGAAGAGTTAAATTCTAGATTATTTTTGATAGTAAAGCCGTTTTCAGCCATTTATTGGTTAAAAAACGGA # Right flank : GCTTGTGTCATGTCGGCTTTCTTGAGAAGTTCAGTCGCTCATTTTACGAGCATGAAATGAAATATATTAAGAAGGAAACAAAGTAGGAGTCTCTGGAAAAGAGCTTAAGAGTCGCTGTAGCGGACAACTCTTAAGCTCTTTTTTTATGCGGATCTCAGTTGTGGAAACCGCAGCCGCTAACGAGGGCTCTTCTTTAGATGGTCTTTTTAATTTCTTTCAAGTCTAATTTGTGAAAAATGTATATTATAGGAAGGGATTTGAAATAGGTCTATAGAATTACCTTATCTGTATGGTTTGTAGGTAAATGGTTCTATTTTCGGACTGAAGCAGCGTCTTGTAAGGGAGGAATCAGCTTGGAATTCATCGCACATATTCGAGAGAGCGACGGAGACCACCAAAGTGTGAAAGAGCATCTTCTTGGAGTCAAAAGATTGGCCGAGTCTTACGGAGAAGGAATAGGCATTAAGCATATCGCAGGGCTTGCGGGGCTGCTTCACGAT # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.48, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTTACGGGTGCGTGGATTGAAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //