Array 1 28135-32726 **** Predicted by CRISPRDetect 2.4 *** >NZ_WIOB01000027.1 Acinetobacter baumannii strain ABS104 ABS104_00027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 28135 30 96.7 30 ............................A. GAAACGCCTGATTCCTGCAAATGCAAAATA 28195 30 100.0 30 .............................. CCAAGCTTTGAGTATCTGCCGGACGCAAGA 28255 30 100.0 30 .............................. TAGAATGATCTGCTTCAGCATTGGATTGCC 28315 30 96.7 30 ............................A. TGCTTAGTAATGCGCAAAAACGGTCATCCA 28375 30 93.3 30 ............................AG CAGAAGAACGCAGAAAAGCGAGAAGCTTAA 28435 30 96.7 30 ............................A. CTTGAAAGGCTTGAGCTTAAAGCTTTTTAC 28495 30 96.7 30 .............................A CAGCTGGCCGCGTATATAACGGCTCAGTAT 28555 30 93.3 30 ............................AC AACTCGATGTTGGGTATGCAGAGAGCCTTG 28615 30 93.3 30 ............................AA ACTTACACTTCTCAGCGTCAAACCATGCGT 28675 30 96.7 30 .............................G GCAGAACTTTTCATGACGCTCATTCTCTAA 28735 30 96.7 30 ............................A. ACCTATCAACGTTAAACCAACGATTGCCAG 28795 30 93.3 30 ............................GA TGCAGAAGATGTTTTAGAACGTTATGACGA 28855 30 96.7 30 ............................A. TGGGATGTTATGAATATTCGACATTACCAA 28915 30 96.7 30 ............................A. CAAAATAGAGTTGGCCTTCCTGTTTGGCCT 28975 30 100.0 30 .............................. CAAACGCTTCAACCAGCCACGTCTTTGAAG 29035 30 96.7 30 .............................C TTCCGCCAAATTCTAGGAGGTTAACATGCT 29095 30 100.0 30 .............................. GTGCATACTTATTGCCGCCAGCAAGTAAAC 29155 30 96.7 30 .............................C CTTCGGGAGGTTTTCTTTTGGGGTGATCAT 29215 30 93.3 30 ............................AA GTTTCGGCCTAATGGATGCGGTCTTGAAAA 29275 30 93.3 30 ............................AA GGACTATCCGTCCCTTTGCCGTTTTTGTAC 29335 30 93.3 30 ............................AC CCTCGGGTGGTTTTTTATTGAGGTGATCAT 29395 30 93.3 30 ............................AG TGGCGCGTTCAAGCGTGCCATTGAAGCATA 29455 30 93.3 30 ............................CA GAAGTAAGTCTTGCAGATGCACGATCTAAA 29515 30 96.7 30 ............................A. CCGCCGATAAAACCCTTACCCGATACGCCC 29575 30 96.7 30 .............................C AGCTCCCGATTCAACATCCAACAACATGCT 29635 30 100.0 30 .............................. TGAAAGACTTGAACGTGGTCAAGTCCTCCT 29695 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 29755 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 29815 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 29875 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 29935 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 29995 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 30055 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 30115 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 30175 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 30235 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 30295 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 30355 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 30415 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 30475 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 30535 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 30595 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 30655 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 30715 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 30775 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 30835 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 30895 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 30955 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 31015 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 31075 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 31135 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 31195 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 31255 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 31315 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 31375 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 31435 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 31495 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 31555 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 31615 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 31676 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 31736 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 31796 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 31856 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 31916 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 31976 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 32036 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 32096 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 32156 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 32217 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 32277 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 32337 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 32397 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 32457 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 32517 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 32577 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 32637 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 32697 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 77 30 95.8 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //