Array 1 5416-5027 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRCX01000033.1 Enterobacter roggenkampii strain GN05753 GCID_ENTE_00254_NODE_128.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5415 28 100.0 32 ............................ TGACGCAATGAATTAATTGTCAAAGCGTCAGC 5355 28 100.0 32 ............................ ATTTATTCATCCTCGATAGGCATATTGCAAAT 5295 28 100.0 32 ............................ GAAGAACCCCTACCCGAAATGTGACTATAAGA 5235 28 100.0 33 ............................ AGAGGAGCTGGATAATCGACATTACCGCTTCAC 5174 28 100.0 32 ............................ TTTCGTCCCGCGCCCCTCATACCGGCTATTTC 5114 28 100.0 32 ............................ TTAAGAGGCGTATTGGCCACCCGGTCGCAGAG 5054 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 7 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATGGGTTGCATAAGCTGTTTGGTGGGGTGGGCTTTATCAGCGGTATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCGCCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCGGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAACACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : GCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCCAATGCCGAACAGGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAACGTTTATTGTTTATGCGAGGACCAGATCGCCCTGCGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATCTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTGTACTCCCCGGAAACTACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGTACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTAGTACCCACACGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAGCGGGTCACGCCGAGCGCTTTCACCTCTTTCTCGACGATATCCATGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3069-2019 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRCX01000176.1 Enterobacter roggenkampii strain GN05753 GCID_ENTE_00254_NODE_78.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3068 28 100.0 32 ............................ AAACACATCCAAATCAACGGGGTCACCGTTAC 3008 28 100.0 32 ............................ AGCAGCACGAACATCACTGCGTCGAATGGGTT 2948 28 100.0 32 ............................ GGTAACCATCAGCCCATGCATGGCCTGCGCCG 2888 28 100.0 32 ............................ GTCTGCAGCTGTCACTGCAGTTGCGTTCGTCC 2828 28 100.0 32 ............................ TGCCAGCCAGCGTACCCATCAATGACGGCCGC 2768 28 100.0 32 ............................ GATGGTCGGCCAGGCTAAGTTAAAACGATATA 2708 28 100.0 32 ............................ AGGAAAACACGTTCCTGATTGATGATTCAGAG 2648 28 100.0 33 ............................ AGTGGTTTCCCACCTTGGGTGAAATGATGCTGT 2587 28 100.0 32 ............................ AGATTCTCCAGATGCGGCTGCGGGTGCGTGCG 2527 28 100.0 33 ............................ ATAAAACCGGGGCGGCGACCGCTGGTGCCGGGT 2466 28 100.0 32 ............................ AGGCCGCGCTGACCAGCATAATCGCTAAGTGG 2406 28 100.0 32 ............................ AGCCCGGCAGAACCTAACCAACCCGCACCAGC 2346 28 100.0 32 ............................ AAGTGATAATGGGGTCGGGCTAATTTCGAGCC 2286 28 100.0 32 ............................ TAAAGAAAAACAGCGCCAGGCAGCGTGACCAG 2226 28 100.0 32 ............................ ACCATGAGCTTTTCGAGATACCGCCCGACCTG 2166 28 96.4 32 ....A....................... GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 2106 28 82.1 31 A...A......C...C......C..... ATAGAAAATAAGGCCTCACAGTCCTTGCACC C [2081] 2046 28 67.9 0 ..A.A...T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 18 28 97.0 32 GTGCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACACTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTGATGTTATTTGTCATGGTTAAGTATAGCCATTTGTCAGGGTGGGTGGAATGGGTGTTTTTGTGTGGGGGATTAATGCGAAGAAAGGTGTTTTGACCCTAATTTTTAGCGTTTGTGTAATAGATTGATTTTAAATGATTATTTCTGGTGGATGAAAAAGAGGGTGAGAGAAGGATTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCGACTGCGACACACAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAACA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 12151-11523 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRCX01000176.1 Enterobacter roggenkampii strain GN05753 GCID_ENTE_00254_NODE_78.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 12150 28 100.0 32 ............................ ATTACAAAAGGCTCTGAATGGGGTTTGTAGTT 12090 28 100.0 32 ............................ ATCAAGAATTGAGGCTCGTCTTGCACAGCGAT 12030 28 100.0 32 ............................ CTGTAAAGCAACAGTAGAGTCAACCTGCTTAG 11970 28 100.0 32 ............................ ATATTCTTTCGCACGCTGAAAGAGGACCCAAC 11910 28 100.0 32 ............................ GAGAGCGCTTGCGATGGCTGATTTAGTCACGC 11850 28 100.0 32 ............................ GAGCGTGCGGCCGCTGGTGGCCTTGTAACTGT 11790 28 100.0 32 ............................ ACCAGCGTGGCGCGGTCTATCCGCTTTGCTGC 11730 28 100.0 32 ............................ TTTCCGTCTGCGCTGGCCACTTCATTGTCTTC 11670 28 100.0 32 ............................ TGCAGCGGCGCTGAGCGTCACGCCGGGCTGGT 11610 28 100.0 32 ............................ CGTGGCCGTGCGGTCACGGCGAAGCATCTGAA 11550 28 82.1 0 .....................AC.ACT. | ========== ====== ====== ====== ============================ ================================ ================== 11 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCACAAACGCAGCCCGTATGTCGTTGCCTAGGGGCTTATCTGGAAGAGGTAAAATCCGGACTCACAGAATCTATGCGTGATTTTCAGGTGGTGGAATTTGAGGACGAAGCGGAAAAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGAGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCATATTATTTCCTGAGTGCTATCTGAGGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACATATTGATTTATATGGTTATAATTTACGTCCCAGAAAAAGGGTTTTATGCGAAAAAGTTGATTATTTTGTTTGCTAACAATAGGATGGCGTTGTTTCCTTTCA # Right flank : AAAACAACTCTCTAAAACATTCAGCTTACCTATTTAAAACTTAATACGATCAAACCCACTGAATCGCCACGGGTTTAACAGACACCTCAGAGTCATTTAAGATGACTTAAAGAGAGGTGCCCATGAGCGGTAAGCGTTATCCTGAAGAGTTTAAAATTGAAGCAGTCAAACAGGTTGTTGATCGTGGTCATTCTGTTTCCAGTGTTGCAACACGTCTCGATATCACCACTCACAGTCTTTACGCCTGGATAAAGAAGTACGGCCCGGATTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAGCGGCGTACTTCGCAAAGCTGTCCGACTGAGGTACGCCTTTAAGGCCGCTGACGAAAAAGCCATGCTGAAAGCGCTGAAGATGGACAGGGCAGAGTGGAGCAATAGCCCGCTCG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //