Array 1 113754-114516 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NLGN01000013.1 Escherichia coli strain MOD1-EC5728 MOD1-EC5728_13_length_114613_cov_27.7297, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    113754	    29	 100.0	    32	.............................	CTTTCGCAGACGCGCGGCGATACGCTCACGCA 	
    113815	    29	 100.0	    32	.............................	CAGCCGAAGCCAAAGGTGATGCCGAACACGCT 	
    113876	    29	 100.0	    32	.............................	GGCTCCCTGTCGGTTGTAATTGATAATGTTGA 	
    113937	    29	 100.0	    33	.............................	TTTGGATCGGGTCTGGAATTTCTGAGCGGTCGC	
    113999	    29	 100.0	    33	.............................	CGAATCGCGCATACCCTGCGCGTCGCCGCCTGC	
    114061	    29	 100.0	    32	.............................	TCAGCTTTATAAATCCGGAGATACGGAAACTA 	
    114122	    29	 100.0	    32	.............................	GACTCACCCCGAAAGAGATTGCCAGCCAGCTT 	
    114183	    29	 100.0	    32	.............................	CTGCTGGAGCTGGCTGCAAGGCAAGCCGCCCA 	
    114244	    29	 100.0	    32	.............................	CCCACCAGCGCGTTTTTTGCCGGGGCCATAGT 	
    114305	    29	 100.0	    32	.............................	TTGAACTCACCACGATTGTTAATATGGACGAT 	
    114366	    29	 100.0	    32	.............................	GGGGGCGCATGACCGTAAACATTATCCCCCGG 	
    114427	    29	 100.0	    32	.............................	GGAGTTCAGACATAGGTGGAATGATGGACTAC 	
    114488	    29	  93.1	     0	............TT...............	|                                	
==========	======	======	======	=============================	=================================	==================
        13	    29	  99.5	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   CGTGCTTGCCGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCTGTTTCACTGGGAGATGCAGGCCATCGGAGTAGCTGAAATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAAACGGGATTTGAGTTCCAGACATTTGGGTTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTGTCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA
# Right flank :  CCCGGTAGCCAGGTTTGCAAGTAACCGGCTCATTTAAACCGTCTGGTCTGTTTCCTCCGGCTCTACAAAAATAATGTCCATCATTTTTAATGGACAC

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//