Array 1 1955-201 **** Predicted by CRISPRDetect 2.4 *** >NZ_WDOV01000014.1 Bifidobacterium bifidum strain BIOML-A19 scaffold14_size9666, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1954 36 100.0 30 .................................... CGGTGTCGTCCTCGTCGAGTTGTTCTTTTT 1888 36 100.0 30 .................................... CCCGCCAGATCTCACGGGCGGCGTCACATT 1822 36 100.0 31 .................................... TCCGGCATTCGCGTTGTAATGCTCTTGCGTA 1755 36 100.0 30 .................................... GAGCTAATCGGAGAGGATTCTCAGGAGATG 1689 36 100.0 30 .................................... CCGCGTTGCGATGCATAGGACGTTCCGCGC 1623 36 100.0 30 .................................... CAGCTTTGGTGGTGCGTGGACTTATCTCGC 1557 36 100.0 30 .................................... GCGCGTCCAGTAATTCCACGTCGCTCACAT 1491 36 100.0 30 .................................... GTTTCTACTGGTGCTGATAGACTATATAAC 1425 36 100.0 30 .................................... TTTTGGGAGCTTGATTCTGCCGTGATTTGA 1359 36 100.0 30 .................................... GACGGCAGCCGCCACCGACATGACCGCAAA 1293 36 100.0 30 .................................... GCATAAGATCGGCATGGCGGGCGTGGACTA 1227 36 100.0 31 .................................... TCAGGGATATCCTCATCTGATCGTAGCCTGT 1160 36 100.0 30 .................................... GCAAATATCGTCCAGTTGTTCGGTACACGT 1094 36 100.0 30 .................................... AGAACGTCGTTGCGGCGAAACCCTTCATCT 1028 36 100.0 30 .................................... GCGATGCGGACACATGGCATAAAATGCGCA 962 36 100.0 30 .................................... TTTCCACTGTTGTTGTGTTGTGTGTTGTGT 896 36 100.0 30 .................................... TAAGCCAAATCGGACTACCGCCGTCAACGT 830 36 100.0 30 .................................... TTGTGGTGATGTTATTGCAGCCGAAATACA 764 36 100.0 30 .................................... CAACAATCTCAACGGCATGGCCAGCATTGT 698 36 100.0 30 .................................... TTTGACGCACCGCTAACAATTTCGGACTGC 632 36 100.0 30 .................................... TGACGTGACGTTTGGTAGCTGCTATGTGAC 566 36 100.0 31 .................................... TACAGCAGCAGAAAAAGAAGAGCACGTATGT 499 36 100.0 29 .................................... TCGATTCACCACAATAAACCAGATATGTA 434 36 100.0 30 .................................... AAGTCGGTGATCGCCGCCGCTGGGGTGAGT 368 36 100.0 30 .................................... AAACTCACGCCGCTTAACTTGGCCTGCTGT 302 36 100.0 30 .................................... TCATGTCTAACTATATTCGTGGTTAGATAT 236 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.9 30 GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC # Left flank : ATTGCGCGGATGAAGTGGATTATAATGCTTTGTTCCAGAAGCTTGCTGTCAAGAAAATAATCGAAGGATTTACGCCGGAGCAAATCAGTAGATTATTGTCTTTGCAGGCTGAGTTAAAAACAATTATTCAAGATGAGATATGGGGTCAAAATCTACCTCTGACTATTCCCTGCGATTTGGATTTGAAAGCAGCAATTGCAATGGCCAAACCTCGGATTGACACGAGTTCTTTGGGATCCTTGTATGATAAAATTTCGACGGCAGTAGATACTGCCGGTGCTCTTGCCGAGAGCAGGATGCTGGTGACGCTTCATACAACTCAATACTGTGATAACGACCAATTACTTTATCTGCACCGTACTTTATTGCGGTACCAGTTGCAGCTTCTTGACCTGGAATGCTGCAGCAAGAAAGTCATGCTGACAGAGGGGATGAGCCACTATGTCGATGAGGATTACGTTCAGTTCTCATGAACTGTTCAGGAATCCTTAAGGCTATCG # Right flank : AGTGATGCGCAATAGTGTTAGGGGCACCTCTGTTGCTGTCTTCTGGATAGCTTCCGGGGTGTGCTTTTGATTCTGGTGACATATGGGAAACGATTGATGCACAATATTCGGACTGTTATAGTGATGTGTTTTGTCAAGTTGTTATAGGCCAGTGTGGCGTGAGTTTTCCTTCCGAAAAAGCGGTAGGTTTTAGTCCAGTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //