Array 1 12593-11962 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLKP01000002.1 Streptococcus canis strain FU93 ScFU93_contig02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 12592 36 100.0 30 .................................... ACCCCTTTATCATTTGAAGAGATAATGGGG 12526 36 100.0 30 .................................... TAGCAAACCAGTTGAGAGACTAGCGCTCAA 12460 36 100.0 30 .................................... TGTTGGTAGTAAGGGTAGGAGCTAAGCCGT 12394 36 100.0 30 .................................... ACTTAACGTTTTACAAAGTTGTATTTTACA 12328 36 100.0 30 .................................... ACTTAACGTTTTACAAAGTTGTATTTTACA 12262 36 100.0 30 .................................... TTTTGTATCAAATTCTAGCCCAGATGTGCA 12196 36 100.0 30 .................................... AGAAGCAATTGTCATGAACTCTAAGACATT 12130 36 100.0 31 .................................... TTGCTTCTACAGTTACTAACACATTTCGATA 12063 36 100.0 30 .................................... TTATCATCAGAAAAAATAGTGAGAACCAAC 11997 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 10 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CACAGCCTGACGACGTCCACAGCGAGCCTTGTTCGCCTTATAGTAATGATAGCACTCAGTTGGCTGAATGCCCTTGTTTGAGGAAAGTCACTACCTTATGAATGGTTTGACGGCTTCGCTTAAGTGATTGCGCAATTTCGAGGACAGAAGTATCTTTCTCAACAGATGCCTCTATCATTACGAGCTCATTTGTGGTAAGATGGGCATGGGTCATTTATGTTACTTCCTTTCAGACAAATGTGGTGTTTATCTGAGCCTAACATAGATGGCTTTTTCTGTCTAATTTAATTTTACAAATTGGGCACATAAAAAATTGTAAGGCGACAGAACAAAGGAGAAAAGAAGGTTTCATGCGTTTGTCGTGCTGGGATAAGAAGGGAAGTTGATTCTATAGGTTTTTTGGTGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : TTGACAAAATCACGGTTACCAATATGTTCGCCAAATTTCAAGTGTAAGTTAGCCAGTCTGTAAAAACTCTTTAGGAGATTTGTAATCAAGTAGTTTCTTTGAGTAGTTATTAATCCCATTTTCAATAAATGCGGCTTGTTGTTGAGTCGCATTTTTACGTCTCTTTGGTAATCAACGCCGAATGAGTCTGTTGTGATTTTCATTAGTTCCTCTCTCCCAAGAAGAATAGGGGTGGGCATAGTAGATATAATCAGGATCAAAAACTTCTGCTAAACAACTAAATTCAGTGCCATTATCAGCAGTGATAGAGTTAATCTGATAGACTTCAAGGCTTGATTCACTGAAGAAGCCGATTTATCAGGAATAAGTCGAGTGATTTGGTAGCGGCTTTTTCTGTCTGTCAGCGTCAGTAGACACTCGTTTTTTCCCGAGTTTGAATAACCGTATCAATTTCAAAATCACCGCTATGCTCACGATTGTTAATGCTTTCAGGTCGCTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 221388-219033 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLKP01000009.1 Streptococcus canis strain FU93 ScFU93_contig09, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 221387 32 100.0 34 ................................ TCTTAAAAGCACAAGCGTTCTTTCGAAAAAACTT 221321 32 100.0 36 ................................ TAAGGCCATTTCAAATATTTTTATGGGAAATAGCAC 221253 32 100.0 34 ................................ CCCTTGGTAAACAGCCATGAAATTTTGGTCGTTT 221187 32 96.9 36 ................A............... GATTCCTTCGGCGCAGTAACTAGCAAACTTAGCAAA 221119 32 100.0 33 ................................ CCTGTTTCAGCAACATATCGAGCATGCCAATTA 221054 32 100.0 35 ................................ CCAGATGAAGCCTTTAACCGAGCAGCAGGGGTCAA 220987 32 100.0 34 ................................ TATGACTTTGACAAGCTAACGACTGGGCTTCATG 220921 32 100.0 35 ................................ TTGTACCCATTTTAACAGAAATTGAGGTATAAAAC 220854 32 100.0 37 ................................ AATAGAGAAAAAACTATACGAGTACAAAGTTTATGAG 220785 32 100.0 34 ................................ CAATCAACAGCACCGCTTTTAACTTGATTAATCG 220719 32 100.0 33 ................................ GTTAAGCGTCTCTCTAGCAACTTTATCCCATTT 220654 32 100.0 36 ................................ CCTGATGAACTCGGTAATATGTACACCGATATTGAC 220586 32 100.0 34 ................................ GTTCGCTAACTGGACGACCCTGTTTTGTAGCTTG 220520 32 100.0 35 ................................ TTTGATACAAAGTAAAATAGAAGAAAGAAAGATGT 220453 32 100.0 35 ................................ ATGGAAGACTTGCCAAAAAAGGAGCATCAGTTGTT 220386 32 100.0 35 ................................ TCATCTTACTCCTTGATTTGTGACACATTCATCAG 220319 32 100.0 34 ................................ AAAAATATCAGGTTTACATGGATAAAATTCACCA 220253 32 100.0 34 ................................ CACATCAAAACCAACAGATGATGAATTAGAAAGC 220187 32 100.0 34 ................................ ATCTATGATGAAAAATATAAAACGTTGAGCAACA 220121 32 100.0 34 ................................ ACTACTCCGCGCTGGAATATTGTCCATCTTCAAG 220055 32 100.0 35 ................................ CTTTTTCTTTTATTATAAGGAACAGGTTTGAACGG 219988 32 100.0 34 ................................ ATATCAGACCATTGTGGAGACTTAACGAGCGACC 219922 32 100.0 34 ................................ TAGTTGTTTGATTAAATCCTCTGGCATATTTTTC 219856 32 100.0 33 ................................ TTTTTCGGATACCTTTTTGTCGAAGTTGAGGTC 219791 32 100.0 34 ................................ TTTTTGTTCTGTGTCCATTACCTCTATTAGCTTT 219725 32 100.0 34 ................................ ATACGAAAGGTTATCTAATGGTATTAGAAAAATG 219659 32 100.0 35 ................................ AATATAAGTTTGTCCAGTCTGTTTCTCACAGTGTC 219592 32 100.0 34 ................................ CTTAAGCTTGATTATATTATAACTCTGTGTTTCT 219526 32 96.9 34 ........T....................... AAAGAAATAATCATGAGCACGGCTATTGTTTTCT 219460 32 100.0 35 ................................ AACTTGTACGTATAAATCCTTGGCTTCGTTAGTTA 219393 32 100.0 34 ................................ TTCAAACTCTTCGGTTTCTACGTTACTATCTTCT 219327 32 96.9 34 ........T....................... CTGCAACATGCCACGGTTAGTCAACTTGATTTTT 219261 32 100.0 34 ................................ AAGAAAAAATGCGGAACAAGAATTTTGGAATAAA 219195 32 100.0 33 ................................ AACTTCTGCAACTCAGCAACACTTAAGCCATCG 219130 32 100.0 34 ................................ TCCAATGTAAATACCTTTGAGTCGGTTAGCTGGA 219064 32 81.2 0 .....................AC...A..CTC | ========== ====== ====== ====== ================================ ===================================== ================== 36 32 99.2 34 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTTACTTATGATGTAAATACTGAGACATCGGCTGGTAGGAAAAGATTACGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCTGCAGAATTTGTGGATATAAAACACCGCTTAACACAGATTATTGATGGAGAAACTGATAGTATTCGCTTTTATTTATTGGGTAAGAATTGGCAGAGGCGTGTGGAAACACTTGGCCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAACGTTTAGTGCGACTCGAGGTTTCACAGAAAAACCTAGCTTGCTCGCGCAAAAATAACTTAAAAAAGAATCGAAATGGAGATAAAAAGGTTTAAAATGCCTCTGTATTCTCCAGCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : CTATGTTTTTGGCAGTTCTGTTTTGTGATTTTCTCTGTTCACAAGTTTCCAACTGTTTTGTCTCTACTTTTTCTGTCCTATATGCTATAATATGCCTAAATAACTATGGTAAAGGAGTTAGGATGACTAAGGTTCGGTATGGGATTGTGTCGACAGCGCAGGTGGCCCCTCGTTTTATTGAGGGTGTACGCTTTTCGGGCAATGGCGAGGTTGTGGCGGTGTCTAGTCGGTCACTTGATAAGGCAAAGGCTTTTGCGGCAGCGCATCAGTTACCTAAGGCTTATGGTAGTCTTGATGACATGTTGCTGGATACGTCGATTGATGCTATTTATGTGGCAAGTATCAATCAGGATCATTTTCCTACAGCTAGGAAGGCTTTGCTGGCAGACAAGCATGTTCTCGTGGAAAAACCGTTTACCTTGACAACCGCTCAGGCTGAAGAGCTCTTTGCCTTAGCGCAGGAGCGTGGCTTATTTTTGATGGAAGCTCAGAAGGCTGTC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //