Array 1 16204-14286 **** Predicted by CRISPRDetect 2.4 *** >NZ_MLCR01000027.1 Corynebacterium sp. NML120713 NODE_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 16203 28 100.0 33 ............................ GGACTTCCGTGAGTTTGCCGCCTCAGATATTGG 16142 28 100.0 33 ............................ CTTATCCAACTGCGTCATATCGAACCTGGCGGC 16081 28 100.0 33 ............................ CTTATCCAACTGCGTCATATCGAACCTGGCGGC 16020 28 100.0 33 ............................ CCAAATCAAGCAACGTGCGGTCACCAGACTGAG 15959 28 100.0 33 ............................ TAGCTCACATGCTCAACGATGCTGCGGACTTCT 15898 28 100.0 33 ............................ CGGACCGTCATACCGACGATGTAGGTAGCGCTC 15837 28 100.0 33 ............................ CCACTCTTTGCGGACTCGAACTGTATGAAGGAA 15776 28 100.0 33 ............................ CGTACTGGGAGCGCACCACCCAGTACATTATCG 15715 28 100.0 33 ............................ CATGTGCCGCATCAGCGCCGACGACCCATCCCA 15654 28 100.0 33 ............................ CTCCACGCCACCATAAAGTTTCCCCCCATCGTT 15593 28 100.0 33 ............................ CGTTCCATGGCCCGTAGGTAGACATCATGAACG 15532 28 100.0 33 ............................ GAAATTTTTAACCTCATTGGTCTTATCGCTAAT 15471 28 100.0 33 ............................ TAAATGGACCCGATTACAGCACAGCTCGCTATC 15410 28 100.0 33 ............................ CCTGGTTCCAGGCGAAGTAGTCGGATAGATCAC 15349 28 100.0 33 ............................ CCACCAAAGGGGGCACATGTCAAACCAACCGAG 15288 28 100.0 33 ............................ CGCGGGGCATGGGGTGGTGGCGAACATTGTGGC 15227 28 100.0 33 ............................ GGTTTTCCACACCCCGGCTTGTACGACAACGAC 15166 28 100.0 33 ............................ GGTTTTCCACACCCCGGCTTGTACGACAACGAC 15105 28 100.0 33 ............................ CTATCAGACGCGGTAGGCGGGCTGTTTGGTGGC 15044 28 100.0 33 ............................ GGTAGACGCGGATACCGCACTGGCCGAGGCGAA 14983 28 100.0 33 ............................ CCAAAGCAATGTTCTCGCCACCGCAGGCGAGAT 14922 28 100.0 33 ............................ GCAGGGCTTTAAGCGCAAAACAGACGCGCAAGC 14861 28 96.4 33 .............A.............. CTCATCGATGACGGTCGCGTCGTAGTCGTCTTG 14800 28 96.4 33 .............A.............. GCACTGCGCCCCCTCCACACGCAGACGGGTAAG 14739 28 92.9 33 .........T...A.............. GCCAACGTCATCGGAGAACAGCGTGCCCGGCCA 14678 28 92.9 33 ....C........A.............. CGTGGGCGTGCAATCCAGGAGGGTGCAGCGCAG 14617 28 96.4 33 .............A.............. CAACAAGCTGCAACAGCCGCAACCCTTGATCAC 14556 26 89.3 33 .............A........--.... CGAGTCCAACGGGCGTGAAACGTCCGGCCAAAT 14497 28 92.9 33 ....................A...A... CTTGGTTATGGTGGCCTTGATCAGCTGCGAGGT 14436 28 89.3 33 ........TC......T........... CCGAATCAGGCAAGCCGTACTTTGTGTCGGAGC G [14414] 14374 28 100.0 33 ............................ CAGCCGGGATGGTCACGGCGCGGGGGTTCGATT 14313 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 32 28 98.2 33 GTCTTCCCCGCATGCGCGGGGGTGGTCC # Left flank : CATTGTCACCGATGACCCCGTTCAACGAACACAATCACTTTACGACCCCACCATCGGCCTCGTGGATGGCAAAGGGACCGGAGGACTCGACGTCAACACAGACGATCGCTTCTCTGGTGACATGGATCGGCGATACTCCGAAGACCATCTGGCCTGGGCAATCGCGGGCATGGTTGCACTCGGCATGCCAGGTGACGAGAACGGGTCCGGTGTCCGCGATAGGCAATTGACACTGACCGCGCCTACCGAATGGTCGACTTTGGAAGAAATCCAAGACTTCGTCATGAGTCCCATTTCGACCTTGCCAATCTACAAGTGGCGCGACCAGCCAACCCGGCAATCTGGCCAAATCAAAGTATGGGAGCCCATCATGGACAGTTCTTAATCCCCGTAGTGTCACGGTTGTGCTCCGGTTTAAGACTACTAGTGCTCCTGCCTTGCTGACGGGGCAGTCGTATCTAAAATGGTCGGTGGTGTGACATCACTCCAGGTCAGTAAGC # Right flank : AGGATGACCTTCCCAACCTGCCCCGGCCACGACCTCTCTACCCCCATTACTCTCCATCTGCAATTCTGTTCACGAATTCCCGACTCCGTGCGTGAAGCACATCCCCCACCCACTGCCTAATCCCCTTCTGCCCTCATGTCTCCGATTCGCCGATCCACCCCTCGAATGCCAGCAGTCCGGCCTCGGATCCGTCCCCATCGAGCTTGCCTGCGGCTGGGGAGCGGTCCGAGCGTGACGTGGGTCCGAGTGCGGTCGCAAGATGTTAGGTTGTAGCACTTCGGCCGTCATCATTGCTCGCCTAAAATTCGCTCCGCTCAACCTCCTCTGGTCGACCAACCCGGGCAAACACTGCCACCGATTGGCCAAGCGCCGAATTGCGAAATCGGCCCAGGGGCCCGGAACCGGCCGAAAACCCCGTGACCAGCATTGGTCGACGAGACCGAAGTAGCACGCGGAGCGCACTGGGAACCCGGGGTGCGGAGGGGCGTCGATAATTAAAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCATGCGCGGGGGTGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCGCATGCGCGGGGGTGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 22774-27153 **** Predicted by CRISPRDetect 2.4 *** >NZ_MLCR01000019.1 Corynebacterium sp. NML120713 NODE_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================================================================================== ================== 22774 29 75.9 107 AA.........TT.G..A..........T TGATTGGATCGAGGCTTTAGATTCTCCCTGCGTCGGCGGGGTTATGTTCCGATCGCAAGTCGTATGTAGAATGCGGTACAGGCTCCAAAACTTGCAGCTCAGCAAGT A [22776] 22911 29 96.6 32 ............................G TTGGCTGGCCGTTTTCGGGAGACTCAGACGCT 22972 29 100.0 32 ............................. TCCGCTAGGCAGCAAACTTGACCGTTTGGCGT 23033 29 100.0 32 ............................. CCATGACCATGTGCAAAGTCTGTGGCTACGAA 23094 29 100.0 31 ............................. ATTAACTTGGCCCTGAAAAAGGTCACCCTGA 23154 29 100.0 32 ............................. AGCACATCATTCTGCGCGATTAGATGCTCCAA 23215 29 100.0 32 ............................. CGTGACACGTTCACCCTGGACGACGATGACAT 23276 29 100.0 32 ............................. GTTTTGGAAGCGCTTGTAGCAGCAGAAGTCAT 23337 29 100.0 32 ............................. TGGCTCAACGACGCCCAGTAAGGAGCGCAAAT 23398 29 96.6 32 ............................G ATTCATATCTCCACGTCAAACGCTGAAATCGA 23459 29 96.6 32 ............................T AATTGGTGTAAGGCAAAGAGCAACACCGAAAG 23520 29 100.0 32 ............................. ATGCCCAGCACTGCACTCCTACGCCGAATCTA 23581 29 100.0 32 ............................. AAAATCCTCAATTTTACGCTGCCCGCGCATCC 23642 29 100.0 32 ............................. TCGGAATCTCGAAGTAGACCCTCCCGCCGACA 23703 29 100.0 32 ............................. AGTGCGTGCGCCTGGTCTGGTGGCCAGTGCGA 23764 29 100.0 32 ............................. CCGGAAATCCACGAGGTCACGTTTGACGCTGA 23825 29 96.6 32 ............................G TATGGGCCGATTAGGTGGAAGGACATGTCTGA 23886 29 100.0 32 ............................. CTCGAACTCGGCTGATGCCACCAGCACTAGCA 23947 29 100.0 32 ............................. CGTGACACGTTCACCCTGGACGACGATGACAT 24008 29 100.0 32 ............................. CCTCGTGCCCCGCCCAGGATTCGAACCTGGAG 24069 29 100.0 32 ............................. CCGGCGCGCCCGCTAAGCGCGTCACCCGCAAA 24130 29 100.0 32 ............................. AGCCCCATACGCGCCGGGGGAGTAGAGGGCGT 24191 29 100.0 32 ............................. GGTAAGCAAACTTGACACAGTGCCAAAAATTG 24252 29 96.6 32 ............................G GGCTCGACGCAGCGCGTCGCGAAGGTCGCCGG 24313 29 100.0 32 ............................. CTCCATGCGCCACCGGCCATGGGTGGTTTCCA 24374 29 100.0 32 ............................. CGGCCCGTGTGCGTGATGGTGTCGCCCGCGTG 24435 29 100.0 32 ............................. CACGCACGCCGACGTCCCGGCACCTCAACACA 24496 29 100.0 32 ............................. GCGAACGCCGTGGCTATCGGCTTCGAGATGCA 24557 29 100.0 32 ............................. GACAACCTCATTTCACGTGGGGACCGCACAAA 24618 29 100.0 32 ............................. CGGCCCGTGTGCGTGATGGTGTCGCCCGCGTG 24679 29 100.0 32 ............................. CACGCACGCCGACGTCCCGGCACCTCAACACA 24740 29 100.0 32 ............................. GCGAACGCCGTGGCTATCGGCTTCGAGATGCA 24801 29 100.0 32 ............................. GACAACCTCATTTCACGTGGGGACCGCACAAA 24862 29 100.0 32 ............................. ACGACCAACAATGAGGCTACCACAGTCGTATC 24923 29 100.0 32 ............................. GATTGACGCGCGCGTAGCCGGTTCTAAAGATG 24984 29 100.0 32 ............................. TGTTTCATCTCGTGAAAATGTTGCCCCTGACC 25045 29 96.6 32 ............................G TCCAATGAAGAGCCGGGGCACACCACCCGCGA 25106 29 100.0 31 ............................. CCCAATCAGTTTTCGCCTAGCCATCAGTAAA 25166 29 96.6 32 ............................G TGACCGCATGAGCAGCAATTATGACCGGTTGG 25227 29 100.0 32 ............................. AGCTCAGGGTGACGAAACCAGGCCGGATTGCT 25288 29 96.6 32 ............................G GCCCGTGAGCTGTGGTTTGACTTCGAGCAAGC 25349 29 100.0 32 ............................. CTTGCGCCTCACACACAGCGCATCTCGAAGCC 25410 29 100.0 32 ............................. CTTGCGCCTCACACACAGCGCATCTCGAAGCC 25471 29 96.6 32 ............................G GATACGCGGGTGGCGGAGCATGTCGAGAAGCT 25532 29 100.0 32 ............................. GACGCCTCAGCAACCGACCCAGAACCAGGCCG 25593 29 100.0 32 ............................. CCCTACGGTGAGGGGTCGGTTAGGGGGTCGAT 25654 29 100.0 32 ............................. CAGCGGGGACGTAATGAATGTGCGCGGGTCCA 25715 29 96.6 32 ............................G CAGTCGCGCTGTAGCGTCCTGAGACAACAAAA 25776 29 100.0 32 ............................. TTGCCCTGCGATGCCGCCTTGTAAATCTGGTC 25837 29 96.6 32 ............................T CTCACCTCCAGGGGCTTAGGTGGCCGGATTCC 25898 29 100.0 32 ............................. CCCAACCCGCCACCTCACGGACGGCGAGGTCT 25959 29 96.6 32 ............................T CAGCTGGGAACCGAGTTTGATAAGGCGAAGCT 26020 29 100.0 32 ............................. ACTGGCCAAAGGCATGCGCGTAATCGTGACGG 26081 29 100.0 32 ............................. GGCTCCCCCGCCCGAATCAGGCGACCCATTGC 26142 29 96.6 32 ...C......................... ACTGCCTCGTCGATACCGCCGTGCGCGAGGTG 26203 29 96.6 32 ...C......................... TCACGCGCCCACGCCTCAAACGTCAACGCCCC 26264 29 93.1 32 ...C........................G CTGAAGATGAAGGAGGTGACGGGACGTGATTG 26325 29 96.6 32 ...C......................... CTCATTGGGGTTCGAGGCCATTGATTTTTGCG 26386 29 96.6 32 ...C......................... AGCTCCTCGTCGAATTCCACCGGGTGAATTTC 26447 29 93.1 32 ...C............A............ GTGAACAAGGCTGTTGCCGCTTCCGGGGCGCT 26508 29 93.1 32 ...C........................G GCGGGCACCGACCGTGTGGCCCGTAACGGTCT 26569 29 93.1 32 ...C.....A................... ACCGCCGCGTTCAACTTCTCCGGCAAGAATGA 26630 29 96.6 32 ...C......................... GCCAGGACGCGAAAGGCGCGGGGCGTGAACTG 26691 29 96.6 32 ...C......................... GGCGCACCTAGCGCGCCATGGTGTGCGAACAC 26752 29 93.1 32 ...C........................G GCGGGCACCGACCGTGTGGCCCGTAACGGTCT 26813 29 93.1 32 ...C.....A................... ATCAATAACGCTTTCGTAGGTGCACCACCGAT 26874 29 89.7 32 ...C.........TC.............. GACCCTTCGCGGGCCGCATAACGGCGCACTCG 26935 29 89.7 32 ...C.........TC.............. AACACTGTTTGGATCGGGATGCCTGGTGCGCC 26996 29 69.0 41 ...GC.....A..GG.T...A.A.....A CATAGTGTGTTCTTTTCTGAGGCTTTGTGACGAGGTCTTTA C [26999] 27067 29 72.4 30 AC.C...AT.T..T.............T. GTTGAGTCTCGACGCAATACGTTTTCAAGG 27126 28 69.0 0 ........T...TT..T.C..-..GT..G | ========== ====== ====== ====== ============================= =========================================================================================================== ================== 71 29 96.7 33 GTGTTCCCCGCGCCTGCGGGGATGAGCCC # Left flank : TCGACAATGGCATTGATGATATGCTCGTACCCGGCTCGATCCTGAAGCTGGGTCTGGAAAGAGCGGGTAATCTTCCCCGCGTCGTGAGTGCCAGCGAGCCAAATATAAAAAGTGCGGAGCTCCTCGACGGTGATTGCTAGATGCCCCGCGATCTCGCGTTTGATGTTATCGGCGACCCATACGTCGAACACCGCAGCTGCGGCACAGGCTGCATCTACTAGATGCTGGGGAACTGAAAGATGGCCAGTCTCATCGCCGGACTTGGCCCAAAGAGACTGCGCCTGCGGGGAGCGTTTCGAGACCCACTTTTCGAACAGCTGAGCTGTCTCGAGCGTGCTTTCTGGCAGTTCGTGTCCGGGCCTCATGTTTTAATCCTTTTGTCGATGTTGCTTCAAGTTATAGCAAGTGTTTCATACCAATGCAACCCGGAACCCGCTCTAATCAGTTAACGAAAAAATACTTAACTCTTTTGAGCACGGCAGATTCAGGCACTAAATTCT # Right flank : GGTCTTTTGGCAGTTTATAGAATCCATGCACTTTCTGCCGTAGCACGCCATTCGCTGGGAAAATCCAGGGCGAATTGTCTTATCGAAGGGGAGCTTGGTTGCCTAATCAACCACGATCTACCGACGCCCTCTCCTTGGATCGAATTCACTTGTTGTAGGCCGATCCAGATAGATCCATCCGGATATACCTTCGGTCACGACACGTCCACCTCAACAAAAAGGGCAGGCCCTCACGAAAGTGAGGGCCTGTGACCTGTATTGTACGGGCGTTTTCCCGTTTCACTCTCGCCAGTATACGGCCTATCCGTTTCGTATCCAACACTAACCATCGACCAGCAAAATAGTTCCCGCGCTCGGGAACCATTTTGCGTTTCAGACCCGCTCCCGTCGACCAGTACCTACGTTTCTCCAGGTCACGACGCCTGTCTACGAAGAAAGTTCCCAAGACCCGTAGGTCCGGGGAACAATTCTGGAGCGGCGGGGTGGGTCAGACAGCCAGA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.08, 8:1, 9:0.90, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCTGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-32] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //