Array 1 2663-526 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATMS01000025.1 Paenibacillus alvei A6-6i-x PAAL66ix_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2662 30 100.0 38 .............................. CCGATGGAGGTACGGCTATCAACATGCCGCCAATGCAA 2594 30 100.0 37 .............................. GTTCATCATACCAAGGATCATCATCATCTGGGTTATA 2527 30 100.0 36 .............................. TAACATATCGATTTCTATTTAACTCTTTAATTTCAT 2461 30 100.0 36 .............................. CAAGCTAGTCCCGGCACATCTGGGGCTTACGTATAA 2395 30 100.0 36 .............................. AAAAATAAGCTAGTAGCGGTGCTATGCTCGGATGGA 2329 30 100.0 36 .............................. GCCAAAAAAGCGCAAAGGAAAAAAAGCGCGGCCAAG 2263 30 100.0 35 .............................. ATCATTTATCATGATTGGAAATGCCGAGCGCAATT 2198 30 100.0 36 .............................. CGCCTACCTGAAAAGGCATCGAAGCCTATCACGAAA 2132 30 100.0 36 .............................. CACCCTACGCATTATGTAGAAGTTCGCGGGCTTGCA 2066 30 100.0 35 .............................. CGCCGTCCACGAGTCCAATGTCGTCGAATGACGAG 2001 30 100.0 36 .............................. TCAAAACACGCTGTGCGATGATCCAGATGCATTAGT 1935 30 100.0 36 .............................. TAGACGTGCGCGTGACGATGGAGCGAACGGGGTTCT 1869 30 100.0 36 .............................. TTGGCGTCTACCGCTTTCGATAGGAATTGCTCTCCG 1803 30 100.0 37 .............................. TCCGTGTCAACGGCGAACGATTCCGAATGGTCGATCG 1736 30 100.0 36 .............................. AATAAATTTGGAGCATTACAGGCTACTTTCCCCTTT 1670 30 100.0 36 .............................. TACACGAGACGGAATCACACGTCGACTCTTTCGATG 1604 30 100.0 36 .............................. TCTGATACATGGCAACCGATGACTTGTCGATTTCTT 1538 30 100.0 35 .............................. GGTGATCGTGAGACGTAAATAATTGATGCTGGCTT 1473 30 100.0 36 .............................. GATACCCGGTACATCATCATACCTTTACCATAAATA 1407 30 100.0 36 .............................. GGCTTAAAATCATTTAGGCTAGGAACATGAACACTA 1341 30 100.0 36 .............................. TTCGGTACAAGCAGGAACGGGGGTGGAAGGCGCTAT 1275 30 100.0 36 .............................. CTGCTACTTCAGCGCGAGTAATCTCGAACTTAGGTT 1209 30 100.0 35 .............................. TTGATACATTCACATATAGCTTTGGCGACCTCGTT 1144 30 100.0 36 .............................. ATGAGTGCATCTTTAAGCGGAATATCTTCTTCAAGG 1078 30 100.0 35 .............................. ATCTCTAACGCATGGGCGGAAATGGGCACTGTATG 1013 30 100.0 35 .............................. ACGAGCTGATAGGAGTCCATAAGTGACTTATGGAA 948 30 100.0 36 .............................. GGTGTTCCTAGAGGTACGATTTCAAGAATCGAGAAC 882 30 100.0 34 .............................. CGACGTGGGACCGGCACGGCGTCGCTATTGGCCG 818 30 100.0 36 .............................. TTTGTAATGACCTTGCGCGCTTTCCGATTCATTGTA 752 30 96.7 35 ........A..................... AATTTACCAGTCATACACCGGCAAATCAGGGATAA 687 30 93.3 36 ...TG......................... AGTTGCTCACCTGTAAGTTGAAGATCAGGAGGTAAA 621 30 96.7 36 ........A..................... GTAGGTAAAATGATTAAAGAGTTGCGTGTTAAACAA 555 30 96.7 0 .........................T.... | ========== ====== ====== ====== ============================== ====================================== ================== 33 30 99.5 36 GTTGAACAGTAACATGAGATGTATTGAAAT # Left flank : CGTTTATGCCTTTTCTTCTTAAAGAACGGAGATGAGCGAGCATGGGAAAGAATTATAACTATGTCATTTTAGTTTATGATATTGGTGAGAAGCGAGTAGGACGCGTATTTAAAATATGCAAAAAATATCTGGTACATTTTCAGAAATCAGTGTTTCGTGGAGCGATTACACCTGCGAATCTATTGAAATTACGAGGTGAATTGAAGAAGGCAATTGATAAAGAATCTGATTTTGTAGCGATATTCAAAATGACTGGTGACTATTTGTTTGATGAAGAGATTATTGGGGTTAGATTGAACAACTCTGAGTCTTTACTACTCTAATTTTCCCAACCTCTTTCGTACATAAAATTGTTCGATCCTTTGTGCAGCAAGGGATTAGATCGATTTTTGACACGTTGAAAGAATTATGCACTCCCGGTTGGGAAACAAATAGCGAAAACCGCGTGGCTGTAGTAAAATTGACATTGTGAAAGTAATGAAAAACCTGATTTTACTAGG # Right flank : GGATCAAAGCCTGTTGGATTGTCCATTTCTGCTAGTTTCTAACGTACCTATGAGAATTGAAACTTAAGATGGCTATGACTTTGACATACGTTAGATCGCTTACTACGACGCGCTTAGCTTCAGATTGCTGGAACTTGCGGTTCAGTTCATTTACCTGTTGCGATTCGTTGCATGTTGTTTTGTGAGGTTTGTATTGAGCCACGGTGTATGTAGAAACAAGGCCTTGTTCCTTCATAATGCGGCCAATTCGACGTCTTGATACGATAAGTCCACGTTCGTGAAGCTTTGCTTTAATCTTTCTTGTACCATATGCATTTCGGTTCTTCTGGAAGATTTCAACGATAAGCTTCGTAATACCATCTTCATTGCTGGAGTTTTTTGCTTCATAATAGTACGTACTTCTAGTTATTTGCAGGACGTCGCACATTGCTGATACCGAGTATTTGTCGCGATTTTGATGGATGACACTTACTTTCGTCCCATGATCAGCGCTGCTTGCT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATGAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 14256-12186 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATMS01000025.1 Paenibacillus alvei A6-6i-x PAAL66ix_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 14255 30 100.0 36 .............................. AAGTAACTGCTGTTGATACAGTCGCAATGGGTGACT 14189 30 100.0 35 .............................. ACTCTAGGATGGGATGAGGGACGCGGAATCAAATA 14124 30 100.0 36 .............................. GAATGATCCGGAGCAGTTCCTGTAGTCGTCTCTCTC 14058 30 96.7 37 ...A.......................... AGCGCCGCCTGATGCCGTTTGTCCAGTTCCTTGAAAA 13991 30 100.0 36 .............................. ATTCGTTTTGTTTCTCCACCATCTCACGCAGTTCTC 13925 30 100.0 35 .............................. TACATCGACTAACTGCCCCGTCATGACTTTTTTGT 13860 30 100.0 36 .............................. ACGAGTCTTACACCCATACGACCCTGATAAATATCG 13794 30 100.0 38 .............................. TTCACAAGCCCACCACTTGTTAAATGGCTGGTTTTAAC 13726 30 100.0 35 .............................. AGCTCATCAACTGTTCGCATTTGGATTTTGAAAGG 13661 30 100.0 36 .............................. GAAGCAACCTTGTATTTCGTAGTCTCCAATCTTGTT 13595 30 100.0 35 .............................. GTAAACCATCTTTTGTGTTACCGTTTGAAGTGCGG 13530 30 100.0 36 .............................. AAAGGCCACCGGGATACGCATGTGCCGACACGGATG 13464 30 96.7 36 .........................T.... TGCTGTCATACCTCACTACATCGACTAACTGCCCCG 13398 30 100.0 36 .............................. TCGTATGGTTTTTTACCGCCGTGAATCGGCCGACTT 13332 30 100.0 37 .............................. TTCATTTTCGATGGATAGGAGACATTATGAGCTCCAA 13265 30 100.0 38 .............................. TCCGCATTGCAAACCATATCCACAGCGCCGCTAGTAAT 13197 30 100.0 36 .............................. ATTAGTTATTAGTCCAGTTCCTGCTGGGCTTTTTTC 13131 30 100.0 36 .............................. ATGCCATGCTTATTTACAGCAGTAACCTGTATTCTA 13065 30 100.0 36 .............................. TAGCTAGCCCTTATTCATCTTTCGGAATGCTTGGAT 12999 30 100.0 35 .............................. GTAAAAAAGGAGGGTTCCTAGATGATAGAGCTATT 12934 30 100.0 35 .............................. AGGCAGGTATAGAAGCAGCTGACGCGATAAAGGTA 12869 30 100.0 37 .............................. TTAGATTTGGGGAGCTATAGCAAATGCTTTTGATTTA 12802 30 100.0 36 .............................. ATAACGAGACTGGTAGACAATATAAATCGCGAACAG 12736 30 100.0 36 .............................. TGGTTAACACCAGAATTGGAAAGAGTCTCTTTCTTG 12670 30 100.0 37 .............................. AAGCAATAGATGACTATATGTGCTGCAGGGAGGAGAG 12603 30 100.0 34 .............................. TTTCATATGCACCTCATATTCCAATGTGTCCATA 12539 30 100.0 36 .............................. ATAAGGCGTGAGCTCGTTCTGCATGTGCTGGTTGTG 12473 30 100.0 37 .............................. GTATGAATCTCCGTGGGAGTACGATGATTTCGTGGAA 12406 30 100.0 36 .............................. ATGCTAATTTCGCTTTTTTCTATACCACTAAGCGTA 12340 30 100.0 35 .............................. GAATATCCTTTGAGGATACCCTTAGTTACTAGCTC 12275 30 86.7 31 ..........................GCGG AATGAACTCCGAAGTAACCAACAAACGTTTG 12214 29 86.7 0 ...................A...CA-.... | ========== ====== ====== ====== ============================== ====================================== ================== 32 30 99.0 36 GTTGAACAGTAACATTAGATGTATTGAAAT # Left flank : ATCTGCCATCATAGCTGCAATGGTTAGCGGCCAACTGACGAACGGAGCTATCGAAGCTGCTAATGCCGGACAGATAGAAATGAATCTTCTCGCTTACCGTACCGCCTTACTTGGTGCAGCTGCATTTCTGCTCCTTGGCTTATGTGCCGCATTCCGAATCCAAGACAGCGCCGCCGCTGCAATCATGAAATCTCGGCAATCTTCCACTCCTACGACGAATTCTGTAAAGGCGGAAGGATAGGGGATAAAAGATCACGTATCTATGCCTAAATATTGGAATTTTATGTTTCAATATTCTATCTTTATTACAGAGATAGTCTGTTTTTTCCCAACCGTCGTGGATAAGTGATAGGGGCAATATCCAAGTACAGTAAAGGTTTAGAGCAATTTTGACGAGTTTTCAGAAAATTTCGTTTTAGGTTGGGAAAATTATAGTGAAACCCGCGCGGTTGTAGTAAAATTGCTATATTGATGTTTTGAAAAAGCCTGATTTATCTAGG # Right flank : TAATAAAAGCGCCACCTATACTGTAGCGCATTCTCCTTTTGAAGGATATTAGATTTAAAGTTTTATATAAAGACAAAATGATTCTTCCTAACAGTTGTAAATAGTGGTACTATAGTTATAGGAAAATCACACCATGTGTTACTGTTGATTTTAGAAAATAATGTAAAGTCAAAAATTTCAATGCATCGCACGCTACAGTTAAATAATGAATTATTTAATTTGCTTTCATTCTATTTGCTCTACTATATCGTTTCATTACTAGAGTCTGCAATAGGTAATAATATTCAATCTACTTAGGAGAGGGGAACGATATGTACTTTGAATTAAAAGCAACGGTCATGCTGAAGCAATCAGGACATTATTTAGAATGGCCTGAGCGCATAAGTGCTTGGATTGGACGGGCCAGCCTGCACGATCCTGTGTTGAAACATTCACATTATGAAACCGCATACAAGCATTATGTGTATGGAGCGCCGTATCCGAGAGAGGCTGATGGAATC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //