Array 1 8713-8960 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRYI01000023.1 Hahella sp. CCB-MM4 Scaffold23, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 8713 35 100.0 34 ................................... AAAGTACTTCCTACCCTTTCCGAAAAGGTCAAAA 8782 35 100.0 38 ................................... GCAATGCTGTACTCTGCGCATGAGATGAGCAGCACACT 8855 35 100.0 36 ................................... CGGTCTTGATAATATTCAACCAGACGGCACATACAC 8926 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ====================================== ================== 4 35 100.0 39 GTCTCAATAGCCTAAACGGCTACACCTGCTGCAAC # Left flank : TCCACTCTCTTCTGAGCTTCTTCAAGCGCCTTTCGGGTCGTCGTTTGTGTCTGCAGTTTCTGATTCAGGGACTTCTGAATATCTTTGTTTCTTTCTCGTTGCTGAGCGAGGTTTTTCTTGGCTTTGGCAAGTTCTTTGTCTTTGTTTTCAGATTCTCTGATGTACTTTTTCCAGCTTCTTCTGTAAAACCTGAAGTTGCCGGGATAACGCCATGATCTGATCATCCTTGGTAATTTCTTCAAGTCTTTCAATAAGCTGAGCTGTTGATACTTCGGTCTGCATACCCTTCTCGGAACCTAGCTGGGATCAATCGAAGACTATTTCAAAAAATGATCAACTTCAAGCAAGGAGGGGCTTGCTATTGATCATCTATGCACCTCGGAAAGCGTACATTCACATTGTTGTACGCAATCAACCGAGAGGTTGCTTTTATCCTAATTTACATGGGCTAAACCTGCTGCAACCTATCTCTACTACGACAATCACCGTGGGTATGATTT # Right flank : CAGCACCCCTTTTTTTCCTTTGGGATACAAGAGATTATAGCCCCAATTCGGCGAGTCGAAACTTTTCGACTGAAAATACCAGTCTATTTTGCTGATTTTGCCCAATATGGTCATCTAACCTATTGATTCTATTGAACTGGTGAGACAAGCCTCATGCCATTCCTAATAAATATACCCAATCTGTTTGATTTAAAGGCCCTTTACCAGCCAAACGCCTGCGAACACCAATATTAATGATTTATATCGCCAATTTTGGTTTGTGGTGCAGGTTTATAACTCTGGAGTATGAGCAGAGCTTCTCGCCTGCCAGGCTCATACTACGATGATTCCTGGGAAACAGCCAACGGCTTCTCCGCTTGGTGTCAGGGATTTGGCTCGACAGTCCGCGCATAACCGGTACAGCGTTAACCGGTCACCTTCTTCCAGGTGCGTTTTTAGATTCTCATAGAGTTCTGTCAGGGCTTGGCGGTCCGGGACGGCAATTTCATAAACCGAATACT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAATAGCCTAAACGGCTACACCTGCTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 12309-11502 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRYI01000023.1 Hahella sp. CCB-MM4 Scaffold23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 12308 35 100.0 36 ................................... GAACTCAATCCATTTAATGGAAAATCCAGTTAGAAG 12237 35 100.0 36 ................................... CAATTTCTTGGTTGAAGATCTTAATCACTGTTTCAG 12166 35 100.0 33 ................................... AGATACCAGGAAACGAGTTCCCGCCAATCCATG 12098 35 100.0 38 ................................... ACTGTAATAGTGATTTTCAGGTTAGATCCTTTATATCC 12025 35 94.3 32 .................................GA CCGCCATACAACGTTCACGTTCCTGTTTACGT 11958 35 100.0 35 ................................... CGCCTCCGCTTTTGCAGCCAGAGAGGGTGAGGATG 11888 35 100.0 34 ................................... TCTGTCCAAATGATCTCGTTTTTCTCTGTTGGAG 11819 35 100.0 34 ................................... TCTGTCCAAATGATCTCGTTTTTCTCTGTTGGAG 11750 35 100.0 38 ................................... ACAGCAAGGCTACCTACGTATCGTTTGCCACCGGCGAT 11677 35 88.6 37 ......G.G..C........A.............. TTACATTCGTTGGCGTACTAGGTGCCTACATCACACA 11605 35 91.4 34 ......G....CT...................... GTCAGCGTAGCCCAGTTCCCACCGGTCAGCGTAG 11536 35 85.7 0 ......G.....A......C....A...A...... | ========== ====== ====== ====== =================================== ====================================== ================== 12 35 96.7 35 GTTGCAACAGGTGTAGCCGTTTAGGCTATTGAGAC # Left flank : TTGGGGCAACCTGTTTTCCTCGGTTTCGAGCTTATCCATAGTCATCCTTCCACGTTAGCTACAACGCCCGGCGATCATTTCCAGGCCGCTATCGAGAAAAAGTGTAGCAAAGGAATTCCAGGATGCAGGCAAAGTGTTATAATTTTCTGATCAAAATATATACTGATTGAGCATAAGAGAAATGACGCTCTTGAACCATAATTTCCCTGCTATTTAGAAGCCTGGTTTATATGCTCTGGTCCCCACTAAAACTGGCGATATAAAGCGCCAAACCAGGCCTTGTTTGGCCTTCAGCCGAAAAAGGGGTGATGAATCAAAGAGGACAACATTCTTTTTCAGAAATGACATGAGGTTTGTCTCGCCAGTTCAACCAAATCAACAGGTTAGATGAGATTGAAGTACAAAATAGGCAAAAAACGGCAGGGATTTCAGCCGAAAATTATTGACTCGCCGAATTGGGGCTATAATCTCTTGTATCCCAAAGGAAAAAAAGGGGTGCT # Right flank : GTTGTGTTTCTACGTTAATACCAAGAGCTTCTAGAGGTTGCAGCAGGCTTAGCCGTTAAACGTGGTCGGCAATGTCCTCCTGCGGGTCGCCTTTATCCTATTCCTTCACCCAAAATTGCGTTTCCCTCGACATGGTCTAATATCTTCTTCAGGTTCTGGCGCCGTGTCCTCTGCGGCAGTCCGAGCCTGTTTCGGGTGTTGTATCTAACGTGGAAGGACGACCATGGAGAAGCCCCAAACCGAAGAAAGTCTGCTGCCATTGGAAACACTGCTCCCTCTGCGGGCCATGACGGTCACCCTCAGGTTTACCACCGAGGCCCATTTCTCTTTTTTCCACCAGCCCGCGTTGTACGCTTTTCTGTGTCGACTCACCGATACCCGAGATCATCTGGATACGCTGTTCACCCTGGATGCGCCAGAATCAGGACGGGGCACGTATGTTCCCGGAGACTGCTATCGCTTTGTGGTGTATGCCTTTGCCGGCGCGGAGCTATTACTTG # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACAGGTGTAGCCGTTTAGGCTATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //