Array 1 260893-257744 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZOT01000001.1 Comamonas kerstersii strain CCUG 15333 contig_0000001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 260892 28 100.0 32 ............................ ATGCGGTCGGCCAAGGTGCTGACGATCAGCGT 260832 28 100.0 32 ............................ TCAACATTGCAGCAAGTAGCAGGCAAAAAGTT 260772 28 100.0 31 ............................ CAGAGAAAGAGGCCAAAGAGCAGGCCGCAAA 260713 28 100.0 32 ............................ CTGCCCTATAACGCTCAAACAGGTAAAGAGTA 260653 28 100.0 32 ............................ TGACAGTACCGGGATTGTGGTTGCCGGTCAGA 260593 28 100.0 32 ............................ ACCGGAGAACGCTATGCCTTCGCGCACTTATT 260533 28 100.0 32 ............................ TGCTGCACCTTTTACAACCTCAACATTGCAGC 260473 28 100.0 32 ............................ GGTCGTGTGCAGTCCCCAGCCGTTCGCTTAGT 260413 28 100.0 32 ............................ AGCTTTGCCCGTTCTTCTGGTGATGCCTTCTC 260353 28 100.0 32 ............................ GCACGGAATGGGCGCGAGAACGGCCCGTAATA 260293 28 100.0 32 ............................ AATTCGTGACGAAGAAGGCAAGCCAAAGATGG 260233 28 100.0 32 ............................ ACGCTTTCCAGCTTGGGGCACCAGTCCTGTTT 260173 28 100.0 32 ............................ TGACAGTACCGGGATTGTGGTTGCCGGTCAGA 260113 28 100.0 32 ............................ AATGGATAACGGCGTAGTTTTGAGGCTTCAAT 260053 28 100.0 32 ............................ AACACCGGCAGCAGCTCCGACAACCGACGCAC 259993 28 100.0 32 ............................ TTCACGGCTTTTTTCCGAATAGTAAAAGTCGG 259933 28 100.0 32 ............................ AGAGCCACGAGTAAGGGCAGAAGCTATAGAAC 259873 28 100.0 32 ............................ ATATTTGGCGGCCCGGCGCGAATGGAACGAAC 259813 28 100.0 32 ............................ AAGTCCAAGCGGGTGATCTTTCCATGCAATTC 259753 28 100.0 33 ............................ CTCTTGGTCATCGTCGGTCGCAATGTAGATGCG 259692 28 100.0 32 ............................ GTGCCCGGCAGGCCGCCGAGGCGGCCGATCAG 259632 28 100.0 32 ............................ ACAATGGGTTTGCTGCCACGGGCGGCAAAAAT 259572 28 100.0 31 ............................ TTGTAGAGCGCGTGCAGGATCAGCCCTACCA 259513 28 100.0 33 ............................ CACTTCTGCGGCGTGGCCCTGATAAGTCACCAC 259452 28 100.0 32 ............................ TTAGCCATCTTTCGCAACCCATGTGCGCAGAT 259392 28 100.0 32 ............................ CAGACCAAGCCGAAGCGCCGCAAGGTCGTCTT 259332 28 100.0 32 ............................ TCGAAACGAATCTGCGCCCAGTTCTTTAAGGC 259272 28 100.0 32 ............................ TCGTCCACGCCCGTCACAGGACGGCCGAGAAC 259212 28 100.0 32 ............................ AGTCATCGACGAGCGCACAGCCGCCGCCGGAG 259152 28 100.0 32 ............................ TCACTCACAGCAGATCAGGGCTGGCTCATTGC 259092 28 100.0 32 ............................ TTCTGCACGCTGCGTAGCGATTCGCTCACCAG 259032 28 100.0 32 ............................ AGTGGCCCAGCTCATGCAGCGCGGTGGCGTAG 258972 28 100.0 32 ............................ GTTCGGTTCCGAGGGCTACGCCCGCGAAGAAT 258912 28 100.0 32 ............................ TGCTATCAACTTCACTTGTGGCCACTTTTCTT 258852 28 100.0 32 ............................ AGCAGTGAACTCGCGTATCGCTACGCGGGAAT 258792 28 100.0 32 ............................ CAGCACATCGCCAAGCATGACGTCATCCCCTC 258732 28 100.0 32 ............................ ATCCAGTGGTGGATGCAGCAGTCTCAAGAAGC 258672 28 96.4 32 A........................... TTAAATCGCTCGGCTACACCGTCGAAGACATG 258612 28 100.0 32 ............................ TCGCACCCGGTGACTGCGAGGATTCCGGCGTA 258552 28 100.0 32 ............................ TCTTGGCGTGACTGGCAGCAACGGACAGGAGA 258492 28 100.0 32 ............................ GTGACCGGCAGGCCCTTGCCGCCGAGGTACTG 258432 28 100.0 32 ............................ TCACCAAAGAGCTGAGCACCTTTCTCATACAC 258372 28 100.0 32 ............................ TGATCGACGCCAACGACCTACCCGAATACGAC 258312 28 100.0 32 ............................ AACAACAGTGCGACCGTCACAGGCGTTGGCAC 258252 28 100.0 32 ............................ GCACGGAATGGGCGCGAGAACGGCCCGTAATA 258192 28 100.0 32 ............................ TTTACCAGTATATTTCCCCAAAAAATAATCAG 258132 28 100.0 32 ............................ CAGACAACAACAACGACCACAACAGCAAAAAA 258072 28 100.0 32 ............................ ACGCCGTGCCCAGTGCAGCGACTGCGCCAAGC 258012 28 100.0 32 ............................ ATCAACAACCTCGCTGCTGCCTGCGTTGCCCT 257952 28 100.0 33 ............................ CTCTTGGCGTTTTAAGGCATGCACCTGCTTTTC 257891 28 100.0 32 ............................ AATAGTGCCTCATCCTTTGCGGTGAAGAGGTA 257831 28 100.0 32 ............................ AGCCCAGTCGCCAGCCACGCCATCATTCGTAA 257771 28 92.9 0 ....................T..G.... | ========== ====== ====== ====== ============================ ================================= ================== 53 28 99.8 32 GTTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : CAGGCACTGCAAGCGCTGGAGGCGCTGAACTGGCTCAAAGGCATGCGTGACCATATTGCGCTGGGTAGTGTGCTGGCTGTGCCTGCAGGAGCCAGCCACAGGCAAGTGCTGCGTCGCCAGTTCAAAACCAGCGTAGAGCGCCTGCGCCGCCGTCGTATGCAGCGCAAAGGGGAAACGGCCGAGCAAGCAGCACAGGCTATCCCAATGCATGTGGAGCGCAAGCCCAACCTGCCTTTTGCCAATCTGCGCAGCCTGAGCACAGGGCAGATTTTTGCCTTGTTCATTGAGCATGGACCGTTGCTGCCACAGCCTGTAGATGGCAGCTTCAACACCTACGGCTTGAGCCAAGGCGCCAGCATCCCCTGGTTTTGACCCTTTTTTCATGCCGTGATCGCAAGGCTTGAAAAACAAGGACTTAGCGAATCCCCTTGAAAAAAGGTGGTTCGCTAGTTTTGGTCGAAAGCTCATTAAAAATCAATATTTGAAGGCGTTATGCTCTT # Right flank : TGATTGATTGGTAATAGAGGCTTTGCTGATGGGTGGGCAAAGCTGGTCATAGCAATCTAAATGTGGGAGGTGTTGGTAGAGGGGGGAAGCAAGAGCTGCTGCGGTACAAAAGCCTAAAGGCCTACAGCGTCAGGGCGCGTTGCGCATAAAGGCAGGGCTGGAGATAAAGATGTGGCTGGTATCCCGGACAGGAATCGAACCTGTATCTATTTCTTAGGAGGAAATTGTTCTATCCATTGAACTACCGGGACATCGGCGCAGTTGATGCTGTGCAGCAGCTTGGCTGCAGCAGGATCAGGGCGGTATTGTAAATGCCGTGGGCCTGCTGCCAGCCAAGTTTGTGCGTCAGCGATCAATCCTTGACCCGGGTGTAGATCAGATCGACCGCGCTGTTTTCGCCAGTCTGGGCGCGCAGCGTCAGGCGGCGTGAGAGGTCGTAGAAGATAAACAGCGTGCCCATGGCGCCGTTCAGGCTTTGTTCATAGGCCACATACAGGTCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //