Array 1 55402-55766 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHCYJ010000005.1 Campylobacter lari strain TTU_570 NODE_5_length_73297_cov_50.548646, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     55402	    36	 100.0	    30	....................................	GCAGTTGTTGTGCATGATTATTTATGCCAA	
     55468	    36	 100.0	    29	....................................	TTTGTATCAAATATCCATTTGCTACTACA 	
     55533	    36	 100.0	    30	....................................	TTTTTTGGGTGCAATTTTTCAAAGAAAGTT	
     55599	    36	 100.0	    30	....................................	AAAATAGAACAAGCATTTAATCGCTTTTTG	
     55665	    36	 100.0	    30	....................................	TCATTACTTGTCGCACGCTCAAACTTTTTA	
     55731	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         6	    36	 100.0	    30	GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT	                              	       

# Left flank :   ATAGCAGCGCTAATCCCTGCTTTTTTTATTTTAAGGTATTTAGGCGTAGAAACTTTAATCTTACTTGCTATTTTACTTTTTTTAATCTCTATAAAAATCATCGATCAGTATGAAAAACAAACAGGCAAACACGATGATAAGCATATTGTAATAGATGAGGTTGTTGGGGTGTTTTTAGCTTTGGCAATTTGCGGACAAAGTGTTTTTACCTTTTTACTTTCTTTTGTTTTGTTTAGATTTTTTGATATCACAAAACCATCTATCATAGGTAAAATTGACAAAAAAACCAAAGGCGGTTTAGGTGTAATGCTAGATGATGTTTTAGCAGGGATTTTCGCAGGTTTATTTAGCGCTGTGATTTATGGAATTTTACTTAAATTTGATCTTTTATGGTTTGATATAAGCATTATGGAGATATTTTAGCTTCATAAATTTGTGAAGCTATTTTCTAATTTTCTTTAGAGTAAAATAACAATAATTCTAATTGTATTTGCTATACG
# Right flank :  TAGATCTTTATCAAATAAAGAAAACTAGGTGTTTTTCTATGGAAAAAGATCTAAAATATGCTATAATTCTTGCTAAAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTTGGTCATCCACGCAGGGTTACAATCCCTTTAAAACCATTAAAATTCAAATAAACTAGGTTGTATAAACTTGGTTTTTTTCCTTTCTTTGTTTATTTTTTCATTGCCATATTTAAAATCTTTACTTTTTTCATCATATTCAAATAAAACTAGATTTTTATCATCATTCATTTTTTCATTAAAAGAAACCCCACCTAAAAGAATTTGCATATTATCAAACTGTTTTTCTGTTATGGTTAAAACTCTTATATTTCCATAAGGTGGTAAAATTTTCTCTATCGATTTTATCGTTGTTTTTGCCGAAGCTGATCCTTTGCAAATTTTCACATACACGCTAAATTGCATCATAAAAAATCCAAGCTTTATCAATGAGTTTCTAAATCTATTTGCGT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:83.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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