Array 1 95-357 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMAR01000027.1 Chitinophaga costaii strain A37T2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================================ ================== 95 33 100.0 43 ................................. ATTGATTTGCCGGGAACACCGCGCAACAAGTTGTTTAAAAGCG 171 33 100.0 44 ................................. CGGGCAGACAAGCTTTTACGCAGGGTTAAAGTTGTTTAAAAGCG 248 33 100.0 44 ................................. TAGAATGTTTAGTCTTACGAAAAACAGCAGGTGGTTTAAAAGCA 325 33 93.9 0 .............................TT.. | ========== ====== ====== ====== ================================= ============================================ ================== 4 33 98.5 44 AAACTACATAATAAAATGAAAGCAAATCACAAC # Left flank : TTCAGATCAAATTAAATTTAAAGCCCTTTCTTACATTTGGAAAATATATCTTTAACCTAAGAGACTTCACTGTCCGGCAAAATCGACCCACCTCA # Right flank : CTCAATTCTCTTCAGTTTTCAAATTTCCCTTTGAATTATCGGGAGATAGATTTGCGACAACATGTAAATATCCAACAATTGGGGAAAAGAAAAAGGCTAATAAAAAGGCAGTCCAAAAGCTTATATTTTCCCTTTGAGCGATAGCACCACATTGAAAACAACCAATCAAATAAATCAAAAAGGAACCGCATACAAGAGAATAACAGCGTTTTCCATCATTTATAGTAGGGGTACATTTTTAATTAAGCAGGTAAAAATAGCGATACTTCAAGCTACTAAATATTTATAAACAAATCAACACCTTAGTCCCCCCCACATCACCCAAAACCTTCAATTTTCGTACCTTCCCACTCCATGCAATCACCCACCTTCCATCGCACGCGCCTCGCGCCCACACCGAGTGGGTATCTTCATATCGGCAATGCGCTTTCCTTTGCGCTCACGGCCAGTCTTGCCCGGTATTACGGCGCGCACACACTCCTGCGCATAGACGATATGGA # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAACTACATAATAAAATGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 144-3883 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMAR01000034.1 Chitinophaga costaii strain A37T2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 144 47 97.9 30 ...................................T........... CTTAATGTGAAAAACGCCGCCCTCCTGATA 221 47 100.0 30 ............................................... CGGCAAAACATGTACAAGGCCTACCTTAAG 298 47 100.0 29 ............................................... AAGGAAGCACGCAGGATATACGACTCAAT 374 47 100.0 30 ............................................... TCGTACCCCTGAATACCTAGACGGGTTAGG 451 47 100.0 30 ............................................... AATCTTGTCCTTATAATAACGAGGCATTGC 528 47 100.0 30 ............................................... GAGAATGATTACCACGCTTTGTGTGGCGAT 605 47 100.0 30 ............................................... ACGACTTGGAAGGGAAGTAGTAGTAGCTGC 682 47 100.0 30 ............................................... AACCAATGGTTTTGCGCCGTCGCCGGCATA 759 47 100.0 30 ............................................... TCGCGTTGATAGCGATCATAGGGGTGCTGG 836 47 100.0 29 ............................................... ATAAATTTGGTAGTTACGCATTTGCGTAG 912 47 100.0 30 ............................................... CGTACGCGCATGTCGGCCATGTCTATTTCC 989 47 100.0 30 ............................................... AACCAATGGTTTTGCGCCGTCGCCGGCATA 1066 47 100.0 30 ............................................... TCGCGTTGATAGCGATCATAGGGGTGCTGG 1143 47 100.0 29 ............................................... ATAAATTTGGTAGTTACGCATTTGCGTAG 1219 47 100.0 30 ............................................... ATCTTGTCCTTATAATAACGAGGCATAGCT 1296 47 100.0 30 ............................................... CGAAACGAAATTTTTTAACGGTGCAGAAAT 1373 47 100.0 30 ............................................... ATGTGGTTGTTTTTTATGATTAAAGAATAA 1450 47 97.9 30 ..........................A.................... GTAATGTACGCAATGTATTTTTTAGGGACG 1527 47 100.0 30 ............................................... CGAGGACTCGGTACTAAAAGACGGAGAATT 1604 47 100.0 30 ............................................... TTTCCCGTACCTAAATATGACTCACAACCA 1681 47 100.0 29 ............................................... ATGAATTAAATGAAACTTTCTACATGCAA 1757 47 100.0 30 ............................................... TATCAAAACATCCTCTGTACCTCTTACTAC 1834 47 100.0 29 ............................................... ATTCATCACCTCCGTGTTTTTGTCGCGGT 1910 47 100.0 30 ............................................... CATATTTCGGGGATTTCCGGCAATGTAACG 1987 47 100.0 30 ............................................... AAGGACGCATTTGACGATGACGTTATATTT 2064 47 100.0 29 ............................................... GTTAATACGTCATCGACCTTCTCTCCGGT 2140 47 100.0 30 ............................................... GTAGTGAAGCTGGACAGATAATCTTTTACT 2217 47 100.0 31 ............................................... AGTGTGTCGTTTGCTGTTCGCACTGTTACTG 2295 47 100.0 30 ............................................... GCGCGCCGGGTAGCAATCTGAAACGTCTCC 2372 47 100.0 30 ............................................... TTTTCCGGATTTCAAGAATAGATAGTTCCT 2449 47 100.0 30 ............................................... GCAAAGTGTAATCTTGATAAGTAGCTATTG 2526 47 100.0 30 ............................................... CACCGGCTGCGTCCAGGTCAACGGCTATGC 2603 47 97.9 30 ...........................C................... GGTAGGCCGTCGGTTTCACCAGTAGTATTT 2680 47 100.0 30 ............................................... CCGCCGCGTTGGGGATGTGCGGATTATCAA 2757 47 100.0 30 ............................................... GTCATTTCCTGCTATTTGGAAGTCCCAACA 2834 47 100.0 30 ............................................... AATAGGCCGCTGGGTCCTCCTTAACCAGCT 2911 47 100.0 31 ............................................... TCAATGATAGAGTTAGTAGCTACCTTCATTA 2989 47 100.0 31 ............................................... CCTCTTCGTCTTTTAAGCCTTCCAGGTCTGA 3067 47 100.0 30 ............................................... TCCGCAGGACGGCTATCTACGTTATTAAGG 3144 47 100.0 30 ............................................... AAAGAACTTCGCCTGATCTTCTAGGCTTTT 3221 47 100.0 30 ............................................... CCCTTACGCTTCAACAAAAAGACGATGCTG 3298 47 100.0 30 ............................................... ACAATCGGTTCAGAGATCACAGACTCAGCT 3375 47 100.0 30 ............................................... GCGAGGGCGATGGTACTTATAATCTTAAGT 3452 47 97.9 30 ............................G.................. ATAATGAGCTGGTTCAATTCATAGGTACCA 3529 47 100.0 30 ............................................... CGCGACTTATTGGATATATGGGCGCAAATG 3606 47 100.0 30 ............................................... ATGATCCCAGGGTAAACCCGTTGATGAACA 3683 47 100.0 30 ............................................... GTAATACCGGTTCGCTCCTGCAGTTCCTTT 3760 47 100.0 30 ............................................... TAAGTGTTATGTTTCGCTATTTTCTTTTCG 3837 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 49 47 99.8 30 GTTGTGATTTGCTTTCATTTTATTATGTAGTTTCGCTTTTAAACAAC # Left flank : GCGTCGTATTTCCTACGGGTCTTTTTTGTGTTTCTTCCAGTCATTGCTTTGCAAATTTAAGCAACTTTACTGTCCGGATTTATTGGACCATTTCAGTTTCGCTTTTAAACAACAAGCACTACCTACTATAAAGTAGGCAGTAGG # Right flank : CACAATCCTTCAAAGTTCAATACAGTAAAGGATTTAAGGTTGTTTTTAGGAAATAAAAAACGGGCGATCCGCCCGTTTTTTATTTCCTATTAGAATAGTTCTAACTGTTGCACGGTATCCGGTGCGCGCACCTCTAAATGTCCTCTGAATATTTCCATCATACCAAATTGCTTGTCTGTTACGCACATAATTCCCACATGTCCTTGGAATGGCAAAATGGATTTTACCCTTTTAATATGTACATCCGCATTTTCTTTGCTGCTACAGTGACGGATGTACATACTAAATTGGAACATGCTAAAGCCGTCCTGTAGAATTTTCTTTCTAAATGTTGCATAGTTTTTACGATCTTTTCGAGTGTCTACCGGAAGATCGAAAAATACGAGAACCCACATAACGCGATATGCATTTAATCTTGAATGCATTAGTATTCAATTTGTTATTCAAGCACCGGATAGAGGATTTTCCGTGATTTTCCTTCATAACATTTTGCAAGACTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTATTATGTAGTTTCGCTTTTAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //