Array 1 1518523-1517118 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP035497.1 Bifidobacterium animalis strain 01 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	====================================	=======================================	==================
   1518522	    36	 100.0	    37	....................................	GACGATATGGCGCTCAGCGTGGCGGAGTGGGAGGCGG  	
   1518449	    36	 100.0	    35	....................................	AAGACCGGCACCGAACGCGACTTCACCATGACCTC    	
   1518378	    36	 100.0	    39	....................................	GCCCACCACAACGGCAACGGCGGAGGAACACGCGCCGAA	
   1518303	    36	 100.0	    34	....................................	AAGCCGAACTCAATCACACGCATCAAAGCGAACA     	
   1518233	    36	 100.0	    38	....................................	GTATTCGCCGTTCGAGAGGAATGAGAGGATGCTGTCAG 	
   1518159	    36	 100.0	    34	....................................	TCGCCATTGGAGACGCGACGCAGGATACTATCCG     	
   1518089	    36	 100.0	    34	....................................	ACGACAAGCCGCCGCCACCGATATTCACCTGCGA     	
   1518019	    36	 100.0	    38	....................................	GGCCGCTTCGGTGACGGGCTGGTTTTTCCACCACACGC 	
   1517945	    36	 100.0	    34	....................................	AATCCCAGCCGCAAGGTCTGATGCCGCCTGAAAT     	
   1517875	    36	 100.0	    35	....................................	AAACAGGTCAATCAGCGGCGCAGGGAGGAGACGAA    	
   1517804	    36	 100.0	    36	....................................	GAGTGAACAACTCACTGTGCGAACCATCGAACCGTT   	
   1517732	    36	 100.0	    36	....................................	CGGTTGAGCAGCCACGTGGTGATACTGCTCGCGCCA   	
   1517660	    36	 100.0	    38	....................................	CTTGCATCCAACGCGCACAGCATTGCATACGGGTATAG 	
   1517586	    36	 100.0	    39	....................................	ATCATCCTCACGGAAATAGTGAGCATCCTCGAGAACCTG	
   1517511	    36	 100.0	    36	....................................	GGCCGCGATAGTCCACGAGGCGAACGAAGGCGTTGC   	
   1517439	    36	 100.0	    36	....................................	GCTCAAGACACTCACCGACCAGCTCAAGAAGACCGA   	
   1517367	    36	 100.0	    36	....................................	CGCGATCGTCACCGACTGCACTGTGTTCGCACTGTC   	
   1517295	    36	 100.0	    35	....................................	GCGACACCGAACGCCGCCGCCACAGTCGGGATGGC    	
   1517224	    36	  97.2	    35	...................................A	AGGGCCAGCAACGTCGTGGAGATCCATCAGGAGGC    	
   1517153	    36	  91.7	     0	...........T.T.....................A	|                                      	
==========	======	======	======	====================================	=======================================	==================
        20	    36	  99.4	    36	ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG	                                       	       

# Left flank :   ACGCACTTCAACGATGTGCGCCTGAAGAACTTCATCGAGATGCGGCACTGGGACTCACTGCCAATCGAGCGCGCGGAACTGCTCACGCAGATCGTGAGCAACCTGTTCTACGATGTGGAGCGCCGAACCAGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAGGCCGTGCTGCAGGCGCGCGGGGGAGACGCGAAGCCCTACGACCAGCCGATGGACTACTGGGCCGAGGTGCTGGGTGTGGGCGATGCGCTCGCAGACGTGCCGGGCGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGGAGCTATCCCGTGCGAGGGCTGCATCATGCAGCATAAAGCGGGGAATCTCTCGCATCAATACTTTGTAAGGATTTGTTGAGTTTGTGTAGATAAATCAGTCGTTTGTATCACGTCAATTTGTCTACCTCTCGCAAAAGCGCTTATCAGACTATGTGTATCAGTCTGTATTATGGCTACT
# Right flank :  ATGTACTCCGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCGATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATAAAGCTACACCCGTGCGTAGGAGTATGGATGTGACACATGCCATGCGTATACAGCTCGCCTTGCAGGCTGCATGCATGGAGGATATGGGTTATCGAGTAGATGGGACTGAAATATTCTTTACCTCGCACCATCGGATTGTTCCTGTTGAACTAAGAAAATCCGATT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [10,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.10,-7.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.78   Confidence: MEDIUM] 

# Array family : NA
//