Array 1 40676-39792 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LRLZ01000089.1 Escherichia coli strain 100082 ctg7180000030094, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
     40675	    29	 100.0	    32	.............................	TAGAAAAATGAAGGAGTACGAAAATGGACTTA 	
     40614	    29	 100.0	    32	.............................	GTGGTTACCTAGTTGCTATGTGTTCGTGACAA 	
     40553	    29	 100.0	    32	.............................	CGCCGAGCGTGGCGCGGATATAAAAAAGCCCC 	
     40492	    29	 100.0	    32	.............................	GAATATCGGGTGCCAGCCTGGACGCTGGCCGA 	
     40431	    29	 100.0	    32	.............................	ACGCGAATCGGCGGTTTTGAGCGGGTAGCAAA 	
     40370	    29	 100.0	    32	.............................	GCAAACAGCTAACCACCGCCGGGGCAGTTTCC 	
     40309	    29	 100.0	    32	.............................	ACTGATAACGCCGGAGCCTTCTTTTTCAGCAA 	
     40248	    29	 100.0	    32	.............................	AGGTTGACGTTGATTTTGTTCGTTATGTTGCC 	
     40187	    29	 100.0	    32	.............................	GCGTCTCGAGCGCGGGACGATTCAAAACCAGC 	
     40126	    29	 100.0	    32	.............................	AATGACTTTATCGACCGCCCGATCGATGTTCA 	
     40065	    29	 100.0	    32	.............................	CTCCGCTCTGTGTTCGATAAACTCATCCAGCA 	
     40004	    29	 100.0	    33	.............................	AATTTTCTTCATTGCTCAAACAGGCTGCATAAC	
     39942	    29	 100.0	    32	.............................	TATGCCTCTTTTAAACGCGCCGCCTTTTTGCC 	
     39881	    29	 100.0	    32	.............................	ACGAAAATCGCCGCCGGTGTCCTCGCTGATCA 	
     39820	    29	 100.0	     0	.............................	|                                	
==========	======	======	======	=============================	=================================	==================
        15	    29	 100.0	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT
# Right flank :  GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [43.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.51   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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