Array 1 38816-40066 **** Predicted by CRISPRDetect 2.4 *** >NZ_JWGX01000018.1 Shewanella sp. ECSMB14102 contig18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 38816 29 100.0 33 ............................. GTTGAAAATAACGTCTTCAATGCCATTGATATT 38878 29 100.0 32 ............................. CATTGAGCCTGTTGGTTTTTTGCACGGACTGT 38939 29 96.6 32 .T........................... CCAGAGGATATGTTCTCGGCAGTAAAGCGTGA 39000 29 96.6 33 .T........................... CTCTCCCTCGTAAATATCAAGCTTGGCCGTCGC 39062 29 96.6 32 .T........................... CTATATCGTGAGTAGATTAATCAGTGATAAAG 39123 29 96.6 32 .T........................... GCTCGCACCTCACCCACATGGGTGCCGCCGGC 39184 29 96.6 32 .T........................... CTTGTTTATCAGAGGTGCTCGCTGCTTGTCAT 39245 29 96.6 32 .T........................... CAAGTCAGTTTGGTGTCGGTGGCAAGGATATT 39306 29 96.6 32 .T........................... TTTATGATGGTAATCGCTGGGTTAGCAAAACC 39367 29 96.6 32 .T........................... ACTATTGATACGGCAAGTGGCATCAAGTTTAT 39428 29 96.6 32 .T........................... CGGTACGAATGAGTTTAACGAGTTCACCTAAT 39489 29 100.0 32 ............................. TATCAGACTTACGTGAACCCACTTTAACGATA 39550 29 100.0 32 ............................. GCGTAATAGTGCCGCTTCCCGTCAATGTCACG 39611 29 100.0 32 ............................. GTACTCCACAGAATTTACCTGTCGATTTCAAT 39672 29 100.0 32 ............................. AATCTCGCTATTTTCGCAGTAAGCGAGAGCCT 39733 29 96.6 32 ...........................T. TTTTTCAGCGCCTTGCTATAACCGTGTTCGTC 39794 29 100.0 32 ............................. GCTTTTCTAGAAGAAAAACATGGCAAAATTGT 39855 29 100.0 32 ............................. GTCACGACATAGAAACCGTGCTTGAGACAGTG 39916 29 100.0 32 ............................. AAACTTCACCTTCCTTGATTAAGGACGCTTTA 39977 29 100.0 32 ............................. CTTGCCTGTGCTTGTAACCGTGTCATACGCAG 40038 29 93.1 0 ..........................GT. | ========== ====== ====== ====== ============================= ================================= ================== 21 29 98.1 32 GAGTTCCCCGCACCCACGGGGATAAACCG # Left flank : AGTACTGGCAGCCGGTGAAATTGAGCCGCCTCCAACTCCAAAGGATGCCCAGCCCATTGCTATACCAGAGCCGAAACAGCTGGGAGAACAAGGACACAGGAGCCAGTAACTATGAGTCTGTTGGTTGTGGTGACCGAAAATGTACCGCCTCGCCTACGTGGTCGTTTGGCCATCTGGTTACTGGAGGTGCGGGCCGGGGTTTATGTGGGTGACACCTCCCGCAAGGTGAGGGAAATGATCTGGTATCAAATCAGTGAATTGGCAGAGGAAGGCAATGTGGTGATGGCCTGGGCCACCAATACAGAGTCAGGATTTGAATTTCAAACCTTGGGTGAGAATCGTCGTATGCCGGTGGATTTGGATGGTCTGCGACTGGTCTCATTTTATCCAACTGAAAAATAACAAAATATTGCTCTTTAACAACTTGGAATAATAGCCTAAAAAGTTGGTGAATATTTTTAAGTGAAAAATTGCTTAAAAAACAATAGTATTTACCAAGA # Right flank : GTATTTCTTTACTGTACAACCCCAGCAATATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATGTCTACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGTGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACACCCTTCAAGGGGGAGCGGATAAGCGGGGCCGAGTCGCTAACCGCGACTCTTTGGCTACAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACCTCCTGGTGGTGAATTGCCGAGT # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCACCCACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTACCTACGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.80,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //