Array 1 394610-400869 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJXD01000025.1 Roseococcus sp. SYP-B2431 NODE_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =========================================================================== ================== 394610 31 100.0 34 ............................... CACACCATGCTCCAGCGCCGCGGAGTGATCCCGG 394675 31 100.0 35 ............................... TTCGGCTTAGGCTCCGGAGGAGTATTGTCGGGCGG 394741 31 100.0 36 ............................... TCGTGATGTCCGAGCCCTGGTACCGCGAGCACATGC 394808 31 100.0 36 ............................... ATCAACAACCTGGTTGGCTACCACATCCACCAGGAC 394875 31 100.0 33 ............................... GCGGCATCAGCAAGCGCCTCGCGGCGGTTCCAG 394939 31 100.0 33 ............................... TTATGCACTACCCGGCTATTGATTTGCGAAACC 395003 31 100.0 34 ............................... TGTCACGTAGTAAAGCTCGGCTATACCGTCAATG 395068 31 100.0 34 ............................... GTGCAGCAGAAGACCGAGACCGAGCAGGTGCTGC 395133 31 100.0 33 ............................... TTCGCATGGAGCAGAAACATGAGGCTGTCACAG 395197 31 100.0 33 ............................... TGGCGTCGTCATGGTATCCCGCCCTCCGCGTGG 395261 31 100.0 33 ............................... ACCGATGAACCCCGAACCCCGTTCACCCCGAAC 395325 31 100.0 35 ............................... TCGATCACGGCCATAATAGGCGGCAAATCTAAAAC 395391 31 100.0 34 ............................... TATTGGCAGCCGTCCACCACCCTGCGCGGCCAGG 395456 31 100.0 35 ............................... ACCGTCTTACCCATCCTCCCGCCCTCCGCGCCCGC 395522 31 100.0 34 ............................... GAGGCCGAGCGCGCGCCGCGGGCGACTGGCATCT 395587 31 100.0 32 ............................... ACGCCAGCGACGCCGGCCTCTTCCGCCTTGTC 395650 31 100.0 34 ............................... AGCTGGCCCTCGGCCTCCGCCTCCGGCTTCACCG 395715 31 100.0 33 ............................... ACCGAGTCCTTGAGGTCTTTCTGCACCTCGCGC 395779 31 100.0 35 ............................... CGGAGGAGGAGCCCCCCGAGCCGGCCGCGGAAGCG 395845 31 100.0 34 ............................... TGCAGCCAGGAGCCCAAGGCGCCGTATCTCACCG 395910 31 100.0 34 ............................... CATGAAACCGAGTGGCGGAAGCTGCCGGACTTTG 395975 31 100.0 34 ............................... GCGAGCCAGACGGCAGCCATCGCCTTGCCGACGG 396040 31 100.0 35 ............................... CGGCGGATGGCGCCTCCTCCGAAGCTGACGGTCAG 396106 31 100.0 34 ............................... GCAGATGATCATGATGTCACGGCAAGCGCGGGGC 396171 31 100.0 34 ............................... CCGGACCTGATCGTCCTGGACGGCGAGCCGGATC 396236 31 100.0 33 ............................... TGGAGTGTTCGCCATTTGAATCCGGAGCCACTT 396300 31 100.0 34 ............................... ATGCAGCACGACCGGGACGGCATAGACGGTCGCC 396365 31 100.0 35 ............................... CGGAAACCGCGCTTGCCCCCGCCCAGATCTGCGAC 396431 31 100.0 36 ............................... GCCTCTTCGAGGGGGGTGCCGGTCATGCCGCCGCCC 396498 31 100.0 36 ............................... GGGTCGTCGATCATCAGCTCGGTCATGCCCCAAATC 396565 31 100.0 35 ............................... GGGCACAAGGGCCTCCTGCTATGAAGCCGGCGGGA 396631 31 100.0 35 ............................... TGCGACGATTGCAGCGCAGAGGGCCCGGTCTCCAG 396697 31 100.0 34 ............................... AGCGCCATCGTGCAGACGGCAGCCGGGCCCGCAA 396762 31 100.0 34 ............................... CAGGATCTCTACTCGGCGAAAATCCTCGCCTGGC 396827 31 100.0 34 ............................... CGCATGGTGCGCCTGGTGCGCGGCGTGCCGCGCG 396892 31 100.0 34 ............................... CAGGCGGGCGGCGCAGACCGCGCCGTAGCTGGAT 396957 31 100.0 34 ............................... CACGACCACCGCGACCGGGCCTGGGGAGCGGCAG 397022 31 100.0 34 ............................... GCCCTTGCGCGGACGCCCGCCTTTTCCGCCGTTG 397087 31 100.0 34 ............................... TGCGTCTCCCAGCCGGCCATCAAGCGCCTGGCCT 397152 31 100.0 35 ............................... GCAGCCGCATTCGCTGCATGTTCTGCAGATTGCCG 397218 31 100.0 34 ............................... GACGTAATGCGCGCGGAGGGGCAGCGCGCCACCG 397283 31 100.0 34 ............................... CGGGAACATAAATAGGCGAGCCAAGCGGCTGCGC 397348 31 100.0 35 ............................... GTCAATTCGGCCGATGCCAAGAGTAATGATGCCCG 397414 31 100.0 34 ............................... TTGGCGTCTCGGTCGACGGCGTGATCGGCGAGAA 397479 31 100.0 33 ............................... ACTAGGCGCACGCCCAGCGCCCGGCTGAGCGTG 397543 31 100.0 34 ............................... GTCACCCGCAGCTGCCACTCGACGTAGTTGTGCA 397608 31 100.0 75 ............................... CACAGCAGCGTGATGGATGCGACGAGGCAGGCGGTCGCTCCCTCACGGGATCGAGGGCAAGGTCGCCGCGCAGAA 397714 31 100.0 33 ............................... ATCGAGAACGTCCGCGAGATCCGCGGATGGGGC 397778 31 100.0 34 ............................... GTCCTCGAGCTCCGCAACATGCCCTATGCGCAGC 397843 31 100.0 33 ............................... GCGCGCGGGCGGAGCACCTCGCGGATGATCCTG 397907 31 100.0 33 ............................... CACCTGCTGAACGAGCCGGCCCGCCAGCTGCGC 397971 31 100.0 35 ............................... GGCGCGCTGACGAGCCTCGCCTACAACATCGGGAC 398037 31 100.0 34 ............................... CTCGACGATGCGCTCTTCGCCCGCCCGGCGCTGC 398102 31 100.0 35 ............................... GAGGGCAATCACGAGCTCGATGACGCGGGCGGCCC 398168 31 100.0 34 ............................... ACCTGGCGGCCGCAGCGCTGGTTCGAGGTGGATC 398233 31 100.0 34 ............................... ACCAGATCATCGAGGTTCCGCTGAACCTGCTTGA 398298 31 100.0 35 ............................... AGGCCATACTCCAGGGCCGCCACCGTCGCGCGCGA 398364 31 100.0 34 ............................... GTCAGCCAGGTGGTGATGGACTTGACGACGCGGC 398429 31 100.0 35 ............................... TCGCAGAACACGAGGTCCACGGTCCGCCGGCCCGG 398495 31 100.0 34 ............................... AAGGCTGCGGCGGCGCCCCCAGCGCGCGCAGCAC 398560 31 100.0 35 ............................... CTGGGTCGTGAGATTGACGCCGCCCGAAACAGACA 398626 31 100.0 34 ............................... GCCGGATCGGCGGGCGCCGCGTCGCCATCCCCGT 398691 31 96.8 34 ..........................C.... TTCTCCGAGGCCCAGCTGGAGCAGCTGCGCGCTG 398756 31 100.0 34 ............................... CATGAATCCGGGCGACGGGCTCACGCCGGCCCGC 398821 31 100.0 34 ............................... CAGGATCTCTGGACGCGCATGCGCCCCCAGGTGG 398886 31 100.0 35 ............................... GAGCAGTAGGAGGCAGCGCGTGCAGACCCTCGGCA 398952 31 100.0 35 ............................... CCTGGCCGCCCGCCGAACAACCCGGACGGGACGCC 399018 31 100.0 34 ............................... TGCCGGATGGAGGCAGCGGTGTGCCGCGCGCCGT 399083 31 100.0 34 ............................... GTGGAAATCGCCGCCTGGAGCCGGCTCCGCGGCA 399148 31 100.0 34 ............................... TTCCAGGCCGGGGCGGTCATGGCTTCGATCTTCC 399213 31 100.0 35 ............................... GCAGACCTGCACGCGCGTATCGATGGGCCTTCTTC 399279 31 100.0 37 ............................... GCGGCGCCCGGAGGCTGGCGCCAATGTCGCGCTGGCC 399347 31 96.8 33 ...........G................... CAGAAATTTAGACAACCCAGACCCTCCCATTAT 399411 31 96.8 35 ...........G................... TGCGCCTTCAGCAGGCGAGAGAGCGCGGCGTGGAG 399477 31 96.8 33 ...........G................... TTGGGAAGGCCCGAGGGGTCTCCCAACATCACC 399541 31 96.8 35 ...........G................... GCGAACTCCTTCCGAGGCATGAAGTCGGACACGAA 399607 31 96.8 34 ...........G................... ATGCGCTGCGTGGCCGGCCAGTGGTTCGACCGCA 399672 31 96.8 34 ...........G................... CCGCCGCTGAAAAACAGCCGGTCCACCTCATCCT 399737 31 96.8 34 ...........G................... CCTCGGTGACGCCGCGATTATCCGGGCCACCGAC 399802 31 96.8 33 ...........G................... AACGGCCGGGCCGGCGTCACCTTCGATGGGGTG 399866 31 96.8 34 ...........G................... AGGAAGGGCGACGGCGGGTTCTGCGCGGGCTCAC 399931 31 96.8 34 ...........G................... TTGTCCATCTGCGATGCCGTGAGCCCAAGGCCAT 399996 31 96.8 34 ...........G................... ACAGCCGAGTACATCGCGGCGCGGAATGCCGAGG 400061 31 96.8 33 ...........G................... TCGGCCGCGATCAGGGGGGCGAGAACCGCCTGG 400125 31 96.8 33 ...........G................... TCGGCCGCGATCAGGGGGTCGAGAACCGCCTGG 400189 31 96.8 34 ...........G................... TCGTTGGTGATGAACCCCACGTCCTCGACCGGGG 400254 31 96.8 33 ...........G................... TCGATCGGGACGGCCATCATCCTGGACAACTGG 400318 31 96.8 33 ...........G................... GCGGCGCTGTAGCGATCGCCGCCGAGGCCCCGA 400382 31 96.8 34 ...........G................... TCTACCCCGAGGCGATCACCGACGAGCGGGACAT 400447 31 96.8 35 ...........G................... CTCCAGCCTGGCGCGGCCGGCCCATTCGAGCCCCT 400513 31 96.8 34 ...........G................... CTGCGAGAGGCGATGCTTGCCGAGCTCATCGGCA 400578 31 96.8 34 ...........G................... CGTTCCATCTCCTCGGCCTTCACGGCGGCGTGGG 400643 31 96.8 34 ...........G................... GGAATACTCACTCTGACGTAGCTGGTGACGCGCT 400708 31 96.8 34 ...........G................... CACTTCACCTCGCCCACGGCCTTGTGCCGGCGCG 400773 31 96.8 35 ...........G................... ATGTCCGCGGTCGGGCGGATGGAGCGCCGCGCGAT 400839 31 96.8 0 ...........G................... | ========== ====== ====== ====== =============================== =========================================================================== ================== 96 31 99.2 35 GTCGCTCCCTCACGGGGGCGTGGATCGAAAC # Left flank : TGGAAGTGAGGTCGAGCTCGTGCTGATGCTGGTTGCTTACGACGTGAGCACGGAGACGGCGGCCGGGCGTCGCCGGCTGCGGCGCGTCGCCCGGGCCTGTCTGGATTTTGGCCAAAGGGTGCAAAATTCCGTGTTCGAATGCGAGGTGGAACCGGCACAGTGGACCGCGCTCCGTGCCCGGCTGATCGACGAGATCGATGCTGTGACCGATAGCCTGCGCTTCTATCGGTTGGGTGCGGAGGGGCGTCGCCGGGTGGAGCATGTCGGCGCCAAACCGACGCTCGATCTTGAAGGGCCGCTGCTGTTTTGATGAGCTCGCATGCGCGAACCCTAAGCGCTCATGATCTTGACGGTGGGTTCGCGCCGGTCTGCGTGCCGCAACAATCCGCCAGTTTCGCATTTGGGTTTGGAGATGCCCGCCGGATGTCCACGCAGACAACGGGTTGTTCGCGGATACCAGCGCGATTGCACTTCAGTCACCGCAGCCTAGCATGGTGGCG # Right flank : CTGGGGGTAGGCCGTGAACTTCCGGCTCGAAACTGTCGAATCTAAGACGGCAGCTCTCCGTGACTTGATCCAAGTCAGCAGCGCTGTAGGCCTATTAAATGGGGTGTTTTTTGCTTCTCGATGAGCTTGAGAAGCAGGATGGAGTGCTGAGCGCCACGGCAGTCGTCAGATATCTGTCGGCCATCCGCGCAATAATTGATGCTCTTCCAAAGCACATCTTTATGATGATCGCCGTGACGCCCGATGCCTTGCGACGGTATTCGACGGCGTCGCCGGCATTTAGAAGCCGGTTGGAAAATAGGATCGAGCTTCATCCGCTCACTGAACTGGACGAGGCTATTGGCCTAGCGAAATTCTATCTGGACGAGGCGCGTCGAAACGCATCCAGCGTATCGGGCGTGGCCGGCAACCGAGACCTCGTAACAGACAAAGAAATCTCGGAGATTTTCAACGCGGCCCTAGAGAGGGCGAGACGCAGCGGCGACGAGGGCCTCCGGCAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTCACGGGGGCGTGGATCGAAAC # Alternate repeat : GTCGCTCCCTCGCGGGGGCGTGGATCGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTCACGGGGACGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //