Array 1 10717-11720 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNEE01000011.1 Streptomyces xanthophaeus strain NBRC 12829 sequence11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10717 29 100.0 32 ............................. CATGACGGGTCCACGCTGATGGACGACTGGCT 10778 29 100.0 32 ............................. GCAGAGCTGAAGCGGGAACTGGAAGAGCTGAA 10839 29 100.0 32 ............................. GCCCGGGTAGCCGAAGACCGCAACCTCGCCTC 10900 29 100.0 32 ............................. TCGACGACGGTGTGCCCATGATGTGGCTGGAC 10961 29 100.0 32 ............................. CGGCCAGCCTGAACGCCGATTCAGCCACCCTC 11022 29 100.0 32 ............................. GCGGACCGCTGGTCAATGAGCAGGACCAGCGT 11083 29 100.0 32 ............................. GCCGCGACCGGCGGCGGCGGCTGGGCAGCGAA 11144 29 100.0 32 ............................. AAGCAGTAGGAGGAGAGATCATGGGATACGCG 11205 29 100.0 32 ............................. TTCAAGCTCGAAGAGGAAACGAAGGACATCGA 11266 29 100.0 32 ............................. ATCTGGGAGGCGAAGGGTTCGAGGGCGGCGTC 11327 29 100.0 32 ............................. GTGACCATGTCCGACGTCCGGGCCCGCGTGGC 11388 29 100.0 32 ............................. GCGTCCGACCGGCCCCGCTGCTGTCGCCCTCT 11449 29 100.0 32 ............................. AACTTGGCGTCGGGGTCGAAGGGTGCGCTGAG 11510 29 100.0 32 ............................. CTGGAGGTGGCAGCGTGACCCGACCGACCGCA 11571 29 100.0 32 ............................. GAGCCGACCGCCCAGGCAGTTATTCGGGCCCT 11632 29 89.7 32 ............T............A..T GAGGAGACTGGTGACGGCCGGATCTTCGCCGT 11693 28 86.2 0 ..............T.........-.G.T | ========== ====== ====== ====== ============================= ================================ ================== 17 29 98.6 32 CTGCTCCCCGCGCACGCGGGGATGACCCC # Left flank : CCCGCCGGACTGCCGCGCTCGCGGGGGAACAGGGAGACCGCATCCAGCGTCTCGGCCAGCGCGCAGCCGCAGAGCTGCAAAGGCGGGACCAACTCCCATTCGCCCAGCGCGAGCAAGAGGCCGGCATCCGACACCAGATGCAGCCCCTCGCCGAGCCCCGCCCCCCGGCGAGCCCAGTGCCGACTCCCAGGATCGAACCGCCAAAGGGGCAAGCCCAAGCCCGCGGCCGATCTCTTTGACCCGCACGCCGCGGAGCGGCTCGTACGCATCGCGATCCGAACGGGACGGCTCTCGCCGGACGAATCCGGCGACTGCCCGCCTCCCTAAGACGTAGCGCTGTGCCGAAACATCGTGCGGTCCGTGCGCCACACAGTCGCAGACGGCAGGGCGAGCAACTGCGCGGCAATGGATCGCATTCACCAGATATGACCGAAAGGCGAGTATCAGCGGAAGTGCTTCAGAACAACGTGTAACCCATCTAAAGTGGCTGCTCAGCAAGC # Right flank : TGACCGTGTCGGTTGGTCAGGCTGCTGCCTCGTGCCGCGGCGGGGAACCGTGTTCGAGGCGGCCCACGGCGGAATTGATCAGCCCCGAACCACCCGCCGGGAGTCCGGCGCACCGTCCCACCAGGCAATATTTGGCATACTTATTGTCGAAACCTCCTACAGTGAATGGGACTTGGTGACGTCGTCGCGCACGGAGGTTGTTTGTGCTGGATCTGCCGTTCGATCAGCCCGGCCGGTTCTGGCGCGGCAATCTGCACACCCACTCGGACGAGTCCGACGGTGCGCTGTCCCCGGCGGACGTGGTGCGTCGCTACCGGGAGGCCGGTTACGACTTCCTGGCCGTCACCGACCACTTCCGGGCCGAGTACGGCTTTCCCCTGACGGACACCCGGCCCCTGCGCAGCCCAGACTTCACCACGCTCCTCGGGGCCGAGCTGCACGCCCCGCGCACCGAGGCCGGGCCGAAGTGGCACATCGTGGCCGTCGGGCTGCCGCTCGGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 36835-37171 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNEE01000011.1 Streptomyces xanthophaeus strain NBRC 12829 sequence11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 36835 29 100.0 32 ............................. GAGACCGGCGCCGCGTGGCTGCGCCCGGGTGC 36896 29 100.0 33 ............................. TGCGCCTTGTCGCGGGCGGCCTTGTCGCGGATG 36958 29 100.0 33 ............................. TGCGCCTTGTCGCGGGCGGCCTTGTCGCGGATG 37020 29 100.0 32 ............................. CACGACGACAACATGCTCCTCGGCTCCACGGG 37081 29 100.0 32 ............................. ACGGGCTCCGGCAAGACCACCCTTGCCCAGCA 37142 29 89.7 0 .........C............G.....G | C [37164] ========== ====== ====== ====== ============================= ================================= ================== 6 29 98.3 33 CTGCTCCCCGCGCACGCGGGGATGACCCC # Left flank : CGAGCCATCCCAGTGGAGGGCCATCAACGCCCTGGCCAAGCGCGCAGGCCTCCCCCAGCGCAAGGTGGGCCCGCACGCGGTCAAGCACACCACCATCACCCACGCCCTGGCCCGGCCGGGCGCCCGGCGCGACAGGATCCAGCACTGGGCCGACCACAAGGACCCCCGAACCACCGACCGGTACAACCGACGCAGGGGTGCGCTTGACGGCAGCCCCGGGTACGAGGCCAGCGCCGATCTCGCGGAGGAACTCGGCAACTCCGACTACAGGAGTGAATAGCTGCACGGGACCGGATGTGGTGCTGAGTCGCGGACCGGCAGGCTCGTGGCGGCCCACCGTCTGGCCTCGACTCATGCGCGATCCCATGAGCGGCCACCCGGTCAATATCCCTGCCCCTACCCAGCAGAGTTCAGAACTGACTGAAATGCCTGACAAGCCCGATTCTATGCAAGTGCTTCAAAATGAAGCCTGGTCCATCTAAAGTGGCAGGTCACCGAGC # Right flank : GAACAGCCAGTCAACTGGCCCGTATCCCAGCCTGCCCGCCCCTACTCTGGGAATCCCAGGCCGCGAAGACGGAGAGGACCCGGTGCGCACGCGAAGGCAACTGCTCGCGAACCTGGCGGTCACCGCGGCCGCCGCCATGGGAGCCCCTGTCGCCGGCGCCACCCCGGCCAAAACCGAGGAAGCGCAACTCGGCGAGACGCTCGTCGCAGGGCTGCGCGACGCCATGCTGGGACTCGGCCGCACAGCCCCCGACGCGCCCCTGGACCTCCTCGCGGCGGAACTGCACCGCGCCTCAGCCGACTTCAACGACTGCGCGTACTCCAGCCTCGCCCTACGGCTCCCACGCCTGATCTCCGCCGGGCACCAGTCCACCAGCGCCAGCGACACCTTCCCCGTGCTGGCGCAGGCCTACCTCCTCGCGACGCGCATCCTCATCAAACTCCACGAGCCGCAACTCGGCTGGATGGCAGCCGACCGCGCCCGGCAGTTCGCCGCCGCCA # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 45988-46210 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNEE01000011.1 Streptomyces xanthophaeus strain NBRC 12829 sequence11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================== ================== 45988 29 100.0 32 ............................. CCGGTCAGGGAGTCGGCGCCGAGCCGGGCGGC 46049 29 100.0 32 ............................. CTCTCGTTCGCAAGAACCTTCGGGGTGCCCAG 46110 29 96.6 43 ........................C.... CTGGCGAACGACGCTGCTCGACTGCTCATGGGCTGGGCCACCG 46182 29 93.1 0 ...........A..T.............. | ========== ====== ====== ====== ============================= =========================================== ================== 4 29 97.4 36 CTGCTCCCCGCGCACGCGGGGATGACCCC # Left flank : ATCGTCGCCGTGCTGCCGGCGCTCGCTCTGCTCACACTCGGCGTCCTCACCCGGTCGATGCCGGGTGAGCGCACTCGCAGGCCGGCTCGCCAACATCTCGGCGACCGGTGATCAGCTCCCAGCGAGCCCACCCACCATCCGCTACCGGGAGCTGGACCCCACCTGGAACTTCGATTTCGATGACCACGACGAAATGACCCGCCGACTGCCCCGCTTGGCAGCTCTCGATCTGGAGTAAGCGGAAGCTCGCATTCACAAGACGAGGTCCAACAGCAGAGAACGAGACTCCCGGATCACTGTCGGTCATCTCATCGGACCATGCACACGCCTCGGCTGACGAATACGCGACACCTCAACATGCGCGCCTACCAGTCCTGAGGCCGAACAGCCCTGGCCCTACCCACCAGAGTTCGGAACTGGCTGAAATGCCCGACAAGCCCGATTCTCTGCAAGTGCTTCAAAATGAAGCGTGCCCCATCTAAAGTGGCAGCTCACCGAGC # Right flank : CATCGGTTCCCTGATCGTGAGCAAGATCAAGAGCTGCCCCCCGGCAGCCGCGGGGATCCCGGCCCTGAACTCGTGAGGGCTCAGGGCCAGTGCACCTCGCGTACGAACCGTGGCAAGACCCGAGCGCACCGGGTGCCGCAGCTGTTGCCCGGCGTCGCGGACGTGCAGGTGGCGGGGAGGGAGGTCGCCGAGTGCGGCGGGGACGTGGGAGACGTGGAACTCGTACAGCTCTACGAGGCGCCAAGGTCTCCGACGGTGTCCGGCTCCCGCCCGTCCGGTTGCCGTTGGCAGTACGTCCAGGGAGTGAGCGGCGAGGCCGAGATGGCCTCTCGGCCTGTCGAATATCCCAGGTCGATCCGCGCGGCCTGGTCGAAGGAGAAGTCGACTTCTACGAGCCGCACGGCAGCAGCCAGTGCCTCAGGCAGCTCGGAGAGCAATAGCGGTTGTGTGGGCACGCCGTATCGGCTGTAGCGGTCGTCGTGCTCCTCGTCCCAGGTGAA # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 61626-62507 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNEE01000011.1 Streptomyces xanthophaeus strain NBRC 12829 sequence11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 61626 29 100.0 32 ............................. ACCCGTGTCTCACGTGGCTCACTGGTCCCGGT 61687 29 100.0 32 ............................. AACGGCTGGAAGGCGCCGCTCGGCAGGGCCAG 61748 29 100.0 32 ............................. TCGATGAACTCGGGGGAGACGCCGAAGAACGA 61809 29 100.0 32 ............................. TCCCGCCGAGATCACCAATCCACCGAGAGCTA 61870 29 100.0 32 ............................. CAGGCCAACTTCGACGGGAACACGGTCTTCTA 61931 29 100.0 32 ............................. GCGAGCTATACCCGTACAGAGCTGGAGAGTGT 61992 29 100.0 32 ............................. GTGGAGGCCGCGAACGACAAGCTTGCCGCGCA 62053 29 100.0 32 ............................. GTCTCAATACAGATCATGCCTCTTGACCGGCC 62114 29 100.0 32 ............................. GGGACCCTGATCGCCAGGTGGACCCGGACCGG 62175 29 96.6 30 ............................G GCGCGGCTGAAGAAGGAGAACGACGAGCTG 62234 29 100.0 32 ............................. CCGGACCCGGTGTTCGTGCAGCCGTTGCCCAT 62295 29 100.0 32 ............................. GCGGGCTGGGGGGCCGTGGAGAAGTACAAGGG 62356 29 100.0 32 ............................. CACTGAGCGTCACACAGCGATTGCGGTGAGGG 62417 29 100.0 32 ............................. TCCCACGGGCTGCGGAATCTGGCGGTGGCGGC 62478 29 96.6 0 ........................C.... | G [62495] ========== ====== ====== ====== ============================= ================================ ================== 15 29 99.5 32 CTGCTCCCCGCGCACGCGGGGATGACCCC # Left flank : CGGCCCACCGCGGGGTCGAACACCGCCTTCGGGCCCTTGGCGTGCGTCCACGCCCCGCCCGTGCGGGAAGGTACGGAACCGCTGGTTCCACGGGCCGTCCTCGTAGGGCGGTAGCACGGAGGCGGCGTCCCGGATCTCCCACACGTGGACGTAAAGCTGCCGGCCTGCCGCCGCTCCGTGTACCGCTTGACCACCGACGGGTCACCGATGCCGAGCTGCACGGCCAGGCGCTCGACCACCGGCCACGGCACCGCGAGCAGGCCCTCCAGGAACAGCCCGACGTACCGCACCATGCACATCTGGGGCGCGAACCCCAGCAGCAAAGTGGATGACTGCGCCAGGCAACCATGATCGTTCTCGCCGATGCCCACGGTACTGGTGTTCCCCGAGGCCGCTCTACCCAACGGACTTCGGAGCTGGCAGAAATGCCCCATAAGCCCGATTCTCTGTAAGTGTTTCAAAATGAAGGGTGGCCCGCCTAAAGTGGCAGGTCACCGAGC # Right flank : CCACAATCTCGCGGGCCGAGGCCGATTCCAGCGCGTACTCTCGGCTCTGGCGGTCCACGCAAAGGCCTAGGAATCTGTCAGGGCGGTCAGCTCAGCGCCTTCTCGATGGCTTCGAAGATGTCGGCATCGGTCTCCTGCTGCCACGACGGGAGGTCGGGCCAGTCAGCCACGTAGCCTGGCTTCGGGTCCTCGAAGTGCTCGAACATCTGGGCGGTCCAGCACGTCGCGACGAAGCGGCTCTTCTGCTCGCGGGTCAGCCGGGACGTGGCGCCACCGCTGATCTCGATGAACTGACGGACCTGCTCATACACAGAGCCCGCGGCCTTCCGCTCCCACTGCGGCGTGTCCGCCCACGGGGTCACGTAGCCGGCCTTCGGCTCGCCGGGAAAATGCTGATGCACCCCCGCGATCCAGGCTTCGCGGAACAGTCGTGCACCTTCGGTCTGCGACATCCCAACCCCTCTCATCACGGCGTCCTCAGTGTGGCGATCTCCGCCCCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 84542-83902 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNEE01000011.1 Streptomyces xanthophaeus strain NBRC 12829 sequence11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 84541 29 100.0 32 ............................. CTCGAAGGTGAGCGCGTGAAGACCCTGGCCGC 84480 29 100.0 32 ............................. GGGTACGCCTGCATCAACCCCGCCCAAGACGG 84419 29 100.0 32 ............................. GCGCCCTTGGACCGCCGGGCTGCGACGGTGCG 84358 29 100.0 32 ............................. CGCACCCCGGTACACGTGCCACTCAGCCGCTA 84297 29 100.0 32 ............................. ATCATGGCCACGACTGAAGAGCGCCTGCGGGA 84236 29 100.0 33 ............................. CGACGTCGCCCGCTCGGGGTACGCCGCTTCGAG 84174 29 100.0 32 ............................. TTCGCGTCTTCCTCGAACAGGCCGGTGTCCTC 84113 29 100.0 32 ............................. ACCCACCGGAAGGCCCGACGATGACCGACCGC 84052 29 93.1 33 ............T...............T GTCCAGCAAACGCAAACGGCTTATCCCAACTGT 83990 29 89.7 32 .............G..T.........T.. AAGGCCCAGTCGGCGGCCATCAAGTGCCTGCT 83929 28 82.8 0 ........-...TG..........G...A | ========== ====== ====== ====== ============================= ================================= ================== 11 29 96.9 32 CTGCTCCCCGCGCACGCGGGGATGACCCC # Left flank : GAGCCGCAGGTAGTAGTCGCTCTCCGGGGTGGCCGTCTGGAGTCTGCGGACGATCTCGACGAGCTCGTCCCGGGTGATGTCCGCAACCATGGGGCGGGCTGGCCGGGCCGCCTCCCTCACGAACTCCTCCATGCTCCTACAGCTCAATGCTAGGGCCGTCCTCGTGCGGCGGCCCGAGCGGCTGCTCTGGGGCGGTTCGCTGTTCTCCGTGGCGATATGCCGGGCCCTCCGCCGTCTTGAGAGAAGTCGCTGAGCCTGACGTGGCTGAACCAGTCCTGCCTGGAGTTGGGCGGCTCCGCGGCTCGTGCACGGCGCCCGGGGCCGGTCGTCGACCGGTTCCTGTGATCCGGCTTGCCTCGCCGGCTGGCAGCCTGGGTGCCGCACCCTCTTACCTCTCTGCTCAACGACTGACGCCATTGGATGCTATGCCGCAATTGCCGGATTCGCTTAAAGTGCCTGCTAACCCTCCACATCCCGCCTAGAATCCCAGGTCACGAAGC # Right flank : GGGAAAGCCAACGGTCGGTCACCCGCCACGACGTCGGCGAGACCGGCAAACGCCCTGAGCCCCCAAGGCCATCGGCAGGCCTGACAGATCCTGGTGGACGACGAACAAAGTCAGCCGGTGCGGCCCGCGGCGGAGAGGACGGGGTCGGTCGGTTCGAGGGCCAGGTAACTCTCGGCCGTGGCGGCTTCGAGGAGCAGGGGCTTGTCCGGGTTGTCCACGCGTACGGGAAGGGGCGAGCCCGTGAGCCAGCTGCCCTCCGGGTGTTCCTCGGCCTGCCGGAAGGCCGTGCTCACCGCCTCACGAACGCGCGTCCGGTACCGCTGCTCCTGCTCGTAGTGGGCTTGGCGAGCCCGGCGCGCGTACTGCTCGCGGACCTCGTCGTCGTCCTGGTTCTGATCGACGAGGGGGCCGTTCAGGCGGGGGCCGTCCGTGAGGTCCACGGTGTCGGGCATGTCGGTCTGCTGGAGGTGGAGGGCCGCACAGGCCGCGTAGAGGCGGCG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 97594-97137 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNEE01000011.1 Streptomyces xanthophaeus strain NBRC 12829 sequence11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 97593 29 100.0 32 ............................. CTGGAGCGCGTCACGCGAGCTGCACCATCGGC 97532 29 100.0 33 ............................. CTGCTCAAGCACGTCTGCGACGCCGGGAACAAG 97470 29 100.0 32 ............................. GACCATGACCGTGACCACCGAGCAGACCCCCG 97409 29 100.0 32 ............................. GTCGAGGTGACGCTCAGGAAGTTGCTGTACTC 97348 29 100.0 32 ............................. AACGGCATCCAGATCGTCGGCAGCCAGGGCGC 97287 29 96.6 32 ..........................T.. AGCCAGACCCTCCGGGACATCGCTGCTGCTCT 97226 29 93.1 32 .......T......T.............. GTGCAGCAGACCCAGACCGCGTATCCGAACGT 97165 29 86.2 0 .................A.......A.GG | ========== ====== ====== ====== ============================= ================================= ================== 8 29 97.0 32 CTGCTCCCCGCGCACGCGGGGATGACCCC # Left flank : CGGCCTCTGGTCTCCGCAGAGGTACTGGCGGCGGACCCGGACTGGGAGGGCCCGCCGCTGCGCAACGAATCGGTCGGCGCGAAAGTCCTCGGATACGGCCTCTTCGTGGCCGGCCTCGTGGCGGTCGGAAAGCTGCTCTCTCTCATGAGCTTGCCTGAGCCGCTCACATGGCTCCTCCTCGGCCTCATGGCCAGCGCCGGTCACGGTGCACTGAAGCACTGGCTGCCCGTGCCGGCCCTCCCGACGGAACTGCTCTCCGGCCCTACGGCCACTCCGCCGCACCCCGAACCCGCCGCCGACCGCGCGGGCGCAGGACAGCTCCGGTGATCACCGATCGGGGGACTTGGTGGCCGAACGGCGAGAAGCACCGGAGTACCGTCGGCCTTTCATTCCCTAGTGGGGGCGGCTGGTGCCGCATGGGTACTATGTCGCGATTGCCTGATTCAGTCAAAGTGCTTACGAACGGCCTTCTGCTCGCTTAAAATCCCAGGTCACGAAGC # Right flank : CCACCGCGCCCCTACAGCCGTTGCACCCCCGCTTCGGGGCCGGCCTCGAAGCGGGGCTCGGTTCCTAGCCTGGTGGGATGACGAGGACACCACCGAGCCAGGCCGATCGGCGGCTCATCCAAGCGTGCCATGACCGTGAGATCCCGCTGAAGGCGTCCCGGCTCGAGGCCTGGCGGACGCATGGTCTGATGCGCCCGCCCGAAGCCGTCTTCCTGGGCGGCCGCCGCGGGTCCCAGCGCGTCTATCCGCCCGGGACCCTGCTGCAGGTCCTCTGCCTGGCCGCCGTGTGCGACCAGCTCCAGCCGCGGATGCCCCCCGAAGACTTGATCCTCCTCGCCTTCTTCGCCGAGATGCCCCTCCCCTCTCTTCCGGGCCGGCCACTCAGGGTCGCCCTCGCCAGGGCGTACTTCGGCGCGCGCTTCCAGAGGCAGGCCGAGGAGCAGCGCGCGTACGAGGGGGTGCCCGGTGAGTGGCGGGACGAGGTGCAGGCCGACTACAAC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCACGCGGGGATGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //