Array 1 762218-763773 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068550.1 Cutibacterium avidum strain KGMB09337 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 762218 29 100.0 32 ............................. GGCGACCGTGTAGGTCTTCGCGGCTGCGGCGA 762279 29 100.0 32 ............................. GGCTGACCGTCACCCATGAGCAGGCAGAGCTT 762340 29 100.0 32 ............................. GCGGGGAAGCCGTACGGGTTGACGGTGCAGTG 762401 29 100.0 32 ............................. TTGCCCAGGTTCGTGACGTTTTCTCCCGGTTA 762462 29 100.0 32 ............................. GCATTAGAAGCAATGTTTTCATCCCACACGTA 762523 29 100.0 32 ............................. CCTGAGAAGCCAGATTATTCCCCCAAGGAAGC 762584 29 100.0 32 ............................. GCTACCCGTGGCATTTATCGTATGCGGCTCTC 762645 29 100.0 32 ............................. GCTACTCAACCGCCATCGTCGAAGCCATGGAC 762706 29 100.0 32 ............................. GAGTGTCAGCCCCGGTCGGCACATTTCCCGGA 762767 29 100.0 32 ............................. GTGTGGCCTCACAGTCTTCTGTTCCCCTACCT 762828 29 100.0 32 ............................. GAGGGGAAGCCGTGGGGGTTGGCTTCGGTGGT 762889 29 96.6 32 ............................C GGACTCGACGCCTAGCACTGTACGGGCACGCG 762950 29 96.6 32 ............................C GACCCGCAATCATGCGAGGAATGCAGGCAGAC 763011 29 96.6 32 ............................T GATAAGCCCGAAAGGACCCAAAGCACCAGTCA 763072 29 100.0 32 ............................. CCGGAGCGGAAAACTGACGACTTGAAGGCGTG 763133 29 96.6 33 ............................A GAGTGCGAACAGCCTCATCCGTGTAAGCACGAA 763195 29 100.0 32 ............................. ATAGGCAACATCGACCACGCAAGGGGACGAGA 763256 29 100.0 32 ............................. TCCGTGCAGCCCGGCTCTGGACAGGTCAGCCC 763317 29 100.0 32 ............................. TCGTACAAGGCCGGGACGGGCGACTGCAAGGT 763378 29 96.6 33 ............................A TCTGGCAAGCCGCGTTGGGGTGTCCCATTCGAC 763440 29 100.0 32 ............................. CAATATGCCGCACATGTAATAGATCAAAAGGG 763501 29 100.0 32 ............................. ATCAACCTATCCGGGGCTAATCTGGCCGGGGC 763562 29 100.0 32 ............................. ACGAGCTCAACGCCACCGCCGCCGCACTGGTC 763623 29 100.0 32 ............................. GGTCGCCATTCGTCGGCACCGAGACCGTGCGA 763684 29 96.6 32 ............................C GAGTGCCGCCGACGCGCCCGAGACGAACGCAG 763745 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================= ================== 26 29 99.1 32 GTCTTCCCCGCCTACGCGGGGGTGAGCCG # Left flank : GACGCTCCGGGAGATCCCGATGACGGATACGGGTGGGATGTCGTCGACCTGTGGGACGACCGCACTGGCGCGGTCGCCGGCGGGAGATCGTGGGCATAGCCGTGGTCGTGCTCGTCCTCACTGCCTGCCCTGCAGGGCTGCGCGGTCATCTCACGCGGTGGCTGCTCGAGATCAGTCCCGGCGTGTTCGTCGGGCATGTTCCTGCACGGATCAGGGATGCCCTCTGGAGCCGAGTCGTTGAAATGTGCCACGACGGGCGGGCGATCCTCGTGTATTCGGTGCGCGGCGAGCAGTACTTCGAGTTCCGCGTGCATCGACATGACTGGGACGTCGTCGATTTTGATGGACTGAAGCTCATGCAGAGACCGAACAATAAGGCGCACACCTCGACACTGCGGCCAGGATGGAGCTCAGCCGCGCGGCGACGTAGGACGACCAAGCGCTAGATCGAGTACACTTGTATCTAGGCAAAGCTCCTGCATCAGCCGTAGTCGGCTGGT # Right flank : AATCCGCTGTGCGTCAACCCGGAGCATCTGCGCGCCGGGGACGCCTCCAGCAACGGCCGGGAGTATCGCTCGCGTCTCGGCCTGCCGGGCTCACCGCTCAATGACGTCAGGGGCGCTCGGGGACGCGCCGAAGCGATCCGACAAGCCGCGTTGTCGGGGTCTTCCATCGCTGCGGCGATCCACGCCGGAGCCTCGCCAGTCGACCTCAATCAACCGCCCTTGTGGTGAGACCTAAGCGCTTCATCGGCGACCCCTTCCCCTGGCCCGCGCAGACAGGTATACTTCTTGGAAGGAGGGGACCCGGCCCCTCTGTGGAACCGGGTCCCCCTTGTTTACCGGCGTTTGCCGCCTCGCCGCCTCCGAGATCCCGCTCGGGGGCGGCTTTCGTTGCGGAGCTTGCGCACCGCAACCACGGCGGCTGCCAGGTTGACGACCGCTGTCGCCAACTGCAACGCCTGGATCACAAGGTCAGCCATGCCGACCTCCTTCCTGCCCCGCCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCCTACGCGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCGCCTATGCGGGGGTGAGCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1346493-1348225 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068550.1 Cutibacterium avidum strain KGMB09337 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 1346493 36 100.0 40 .................................... CCGGTAGACGAGCTGGTGCAATGTTTAGCGAACTCCCGCG 1346569 36 100.0 39 .................................... ATCCGACGGCCCTCGTGGAGCACCGCCCCGGGCGCCGGT 1346644 36 100.0 38 .................................... GGACGCATGGAGGCACTCAGGGCCACTCGATGCCACTG 1346718 36 100.0 38 .................................... TGGAAGGGGCATCCCCGGCAGGGTCCGGCCCGGGAGCA 1346792 36 100.0 37 .................................... GTCGTGGCATGGCCGCACGGCTGCACTGCCCCCGACA 1346865 36 100.0 36 .................................... GATCAGACAACACCTCCCCGGCGAGCGCACCGTATC 1346937 36 100.0 38 .................................... CGGATTACGGGCGGCTATTCTTTCACTGCTGGTAAAGG 1347011 36 100.0 37 .................................... GAACAAAAGCAGCATCTAACGCGATCTGCCACTCCAC 1347084 36 100.0 42 .................................... GTTCACAACATGACAGGGGAAGGCGACAACACTAGCGGCGGG 1347162 36 100.0 36 .................................... GACATACCCGGCCCACCAACCGCACTAAACGGAAGA 1347234 36 100.0 40 .................................... ACCCGTGAACAATGGCTGTCACCACAGGTATGGCCCGCCG 1347310 36 100.0 37 .................................... TTGATTTCCAGGACCCCTACGGGATGCCGCTCCGAGT 1347383 36 100.0 37 .................................... TTGATTTCCAGGACCCCTACGGGATGCCGCTCCGAGT 1347456 36 100.0 37 .................................... TTGATTTCCAGGACCCCTACGGGATGCCGCTCCGAGT 1347529 36 100.0 38 .................................... ACATCTGCATTAGTGCATCACTGCGACGCGCCGGCGCC 1347603 36 100.0 37 .................................... CAGGGCGAGGAGCAGGCGTTCCGGTTCGCGAAGGTAA 1347676 36 100.0 38 .................................... CCATAGGCGACCCGAGGGCACGTAAAGCCCCACCGGCG 1347750 36 100.0 38 .................................... ACGCTGAGAACCCTCATAGTAGCCCTCAACACGAGAAT 1347824 36 100.0 37 .................................... TACGGCAAGCGGTCTGCGTGGTCGGTCTCTGGTCAGC 1347897 36 100.0 39 .................................... ACGAGTGATGTTGTTATGACCAGCTGCCTCAGCCTACTG 1347972 36 100.0 37 .................................... ACTTTACTCGTCGGCATAACCCTAGGCGCTGGAGCAG 1348045 36 100.0 35 .................................... GTCCCAATGGTCCCGAACTGGATCGCGCCGTCTGC 1348116 36 100.0 38 .................................... ATAGCCAATTGCCATGAGCTAAAGACTCATCACCCAAC 1348190 36 75.0 0 ...C....C.G..C....G.............GCTG | ========== ====== ====== ====== ==================================== ========================================== ================== 24 36 99.0 38 GCCTCGGCTTAACTGCCGAGGCAACTTCGTTGAGGC # Left flank : ACCGCGGGGTGACGGTCAGATGAGTCGTCAACCCGACGAAATGGCGTATGTCATCGCATATGACGTAGCGGACGATCGCCGCCGCGACGCAGTCGCAAAGGTGCTGGGAGGCTATGGGAACCGTGTGCAGTACAGCGTGTTCATTGTGGTGTGCACCAAGGCGGCACTTCTTCGGTTGCGTCGGAAGCTGACTGGGGCCATAGATCGTGAGGAGGACGCGATACTTGTGGCGCTCCTGGGCAGCGATGGCCCATCGGGTCTTCCAGTGGATTGGATAGGTCGAACACGAAAAGTGTTCGACGATGCGCCCGTCATCGTTTGACGCGAGAGGGTCACGGATCATGAAACCGTGCTGACCGCTCGCACACACGAAGCTAGTTCTCAGAGACGGTTTCAGCGAGATACCGCGGTGTGATTCTTGATAACTACATATTCCCGAAGCGGACCTCTCGCGAAGGGTCGATATTCTTCCTCGTGAGAGGCGCCTAGATTGCCACGCG # Right flank : GAGGCCCTACTCCCTGTCTTTCCCCGTGAAGATGGGGAAACCTCCACATTCCCGACCCACCCAACCCCCTACACTTCCACCATGATCTCCGTGGACCCCACGAACACCAATCCGCACCCCGCCCGCACCCTCGTCATGGGAGTCGTCAACGTCACTCCCAACTCCTTCTCCGATGGAGGCATGTGGGCCGATCCCGAGGTGGCCATCCGGCACGCCCGCGACCTCGTCGCCCACGGGGCTGACATCATCGACGTTGGTGGTGAGTCCACCCGTCCGGGCACAGAGCGGACTCCTAAGGACGAGGAACTGCGTCGCGTGCTGCCTGTCGTCGAAGCCCTGGTAGCCGACGGGGCCACCGTCTCCGTCGACACCATGCGCGCCTCAGTGGCGAAAGCCGTTGCCGAGGCCGGAGCCACCATCGTCAACGACGTCTCCGGGGGCAAGGCCGACCCGGCCGTCCTTGACGTCGTCGCCGACGCCGGAGTCGACTACGTGCTCAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCGGCTTAACTGCCGAGGCAACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //