Array 1 822311-820481 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFJ01000001.1 Wohlfahrtiimonas chitiniclastica strain F6513 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 822310 28 82.1 32 A..AG..C.....T.............. ACAGCCAGGGTGGTGCAAGCAATGTATATGAC 822250 28 96.4 32 .............T.............. CATTAACAAATGTTAGATATAGTTTTTATTCA 822190 28 96.4 32 .............T.............. TTGAAGTCAGGGATGTCTTGCCCGCAGTACTT 822130 28 96.4 32 .............T.............. ACTAGACTTATTCTTTGCATTGCTAGCTCTAG 822070 28 96.4 32 .............T.............. AACTCCGAATCCATATGACGTTGAATCGCCAT 822010 28 96.4 32 .............T.............. AAAGCAACAGTTGCAACAGTAGGCAACTACCA 821950 28 96.4 32 .............T.............. ATGCCAGTAGGTTTGCGCTTGAATTTGATTGT 821890 28 96.4 32 .............T.............. TATTTATAAATCAAAAGCTTGCTTACATTTAA 821830 28 100.0 32 ............................ AATTGCTTTTTTTTCTTCTGTTGTCTGATTGG 821770 28 100.0 32 ............................ AACCCACCTTCGATTTTCTTGCGCTCGATCAC 821710 28 100.0 32 ............................ TCGGCACCAACATTTGACATGATACAGTTTTT 821650 28 100.0 32 ............................ TAACTGCGTGATCGAGCGTCACAATCCCTCGA 821590 28 100.0 32 ............................ AACTCGCATAAACAAAGAAACAGACAGAAAGA 821530 28 100.0 32 ............................ AAAAGATGTTAGTGCGCTATCAGTCATGGCTG 821470 28 100.0 32 ............................ TTTGGCTCTGTTTCTCGGTAGCGTGCAAATAT 821410 28 100.0 32 ............................ TTCGCCTTCAATGTAATCAACTGATTGTAACC 821350 28 100.0 32 ............................ AACAGGCTAAACAAGAATTAAATAGGGATTTT 821290 28 100.0 33 ............................ CTCAATCTTCTTGCGCTCGATCACAGCCATTTT 821229 28 100.0 32 ............................ TTCAAATTTTGAGTACAATTCATTGAGGTAAA 821169 28 100.0 32 ............................ TTTCTTGAAGTCGATGCCGAAATGCTTTTTCA 821109 28 100.0 32 ............................ ACGCCGTGCACGAGCTGCTGTAATCGATTCAG 821049 28 100.0 32 ............................ CTGCATTGGGTGTGCCAGGTGAATTCGCATCT 820989 28 96.4 32 .............T.............. ACTATCAAGATGGAGTATAACCGCAGATGAAG 820929 28 100.0 33 ............................ ATTGAATTCAGCAGTGGGCAACCAGTGATTTTT 820868 28 100.0 32 ............................ CCCCCGTATTACTATGTGGGGGTTGGGGAGGT 820808 28 100.0 32 ............................ TGACTAGCATAGCCAATAATTCCATCAATCGA 820748 28 100.0 32 ............................ ACTAATAAGTCCAGATGAAACAAGCTCTATTT 820688 28 100.0 32 ............................ CCTGCAATTTTTCTCCTCGACGTCGACAAATT 820628 28 100.0 32 ............................ ATCAAAGAATGATACGAATGCATTCCCCAACC 820568 28 100.0 32 ............................ TGCATCGATTAAATCCATCAATGCATTTGACA 820508 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 31 28 98.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TATATTGTTGCTTGGCATTTTTTTCTATAACGGATTGGCTCCAAATTTTATGGAATTCGTTATAGATATGCTCAAATGAATCATTGTTATTTGTGTTTTTAGGATTTATCTTCTCAATAACAACTAATTTTCTGAGTTCATTATGTTTTGTACGTGCTTCAGCTAAAGAGATGAGTGGATATTGTCCAATAATGAATGTATCTTCTTTACCTGTATCTGGGTTAACGTATCTATATTCAAAAATTTTTGTGCCTGATGGAGTGATTTTTAAGCATAGTCCATAGCCATCATATAGGCGATATAACTTGTTTTTAGGTTTTGCATTTGCAATTTGTGTATTGGTTAATGGTTTTGAAATTCTAGCCATTTTTATACCCTTTTGAATACCCTCTAAAATTAGTGATTTATACACATTGATAGAAATGTAAGGAAACAATGTTATATTAAGAATAACGGTATATCAATTGGTGAAAGTCGTTAGGAAACGAGCGGAAACGGGT # Right flank : AGTGGTTCCATGGTGAATTTGGAAAGTTTGCGGTTCACTGACTAAAAATTGAGAGTTTATAGTAGAAAATTTTCTGAGAATTTGAGAAAAAATTGCAGAAAAAATGATAAATGTTATAGTTTGCACGATTAGATGAAATACAAGCACAAAATATAATGTGCCAACAATCATCATAAGTATAGAAAAACAACATAATATATTGATATTAAGGAGAATATTATGCACATGCATTTGAGTAATGAAGATCTTGATGCTTAATTACGGAAATTACAGCATCACAAGAGTGGATAAAAATGGCGACACATACCATTGGTCAGCAATATGATAAAGCTGCGTTAAATGACATTACTAAAAGTGTAAAAATGATCATTGGTCACTTTTTAAAAAGTGTTGGTACGACCTTTGTTTGTGTTGAAAATTCATTCATTACATCCTTGCCAGTGTTTGCGGATGCCAATAGCAATACCGGTGGCAGCACACAATGGAATAATTCAGTGAAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1005636-1003027 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFJ01000001.1 Wohlfahrtiimonas chitiniclastica strain F6513 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1005635 28 100.0 33 ............................ AGGCGGAATCAAGGCGCCAAGCAATAAATAAAT 1005574 28 100.0 32 ............................ AAACTAGCGCTGCTAATTTATCAATACACGGA 1005514 28 100.0 32 ............................ TGATTGAATCGAAAGCATCATAAAAAGAGCTG 1005454 28 100.0 32 ............................ GCAATTTTCCCCTCGCTCCATCTATGTATAAT 1005394 28 100.0 32 ............................ TAACAAGTAATCAAGGCTCGCTCCCGCACTTC 1005334 28 100.0 32 ............................ AAAAGAAAGCAGCAACAGCAGCCAACTGTTTA 1005274 28 100.0 32 ............................ ACCGCCATTTGATGCGCATCGTTCTGGGCGCT 1005214 28 100.0 32 ............................ GCGAGAAAAAAAGGCGCGGGGGTCGTAGACTC 1005154 28 100.0 32 ............................ CACCTCGGTCATGAGTGATATTGTTGCATTGA 1005094 28 100.0 32 ............................ ATGATAGATGACCTGATAGTCGCCACGACCTT 1005034 28 100.0 32 ............................ GCGTATCTTGAAGGCGTGATTGGTGTGATCAT 1004974 28 100.0 32 ............................ TAAGCCCGATTGACACTTGCATTAAATACTCA 1004914 28 100.0 32 ............................ AGAAGAATCGCGCGGTTTCTTTGCCTGACATA 1004854 28 100.0 32 ............................ ACTCAGCGATTCAGGAAAAAACACACCATCAC 1004794 28 100.0 32 ............................ TAGTCGTTCACTTTTTGCAGCTGCAACAAAAG 1004734 28 100.0 32 ............................ CGACCCAAAAGCCGGTCGCGCTATACGAATGG 1004674 28 100.0 32 ............................ CTTAAAATAAGGCGGATCAACAATCGCTAGAT 1004614 28 100.0 32 ............................ AAGATCGTCATTGAGATCCGCAAGCGATTCAA 1004554 28 100.0 32 ............................ CGTCGCAGATGCCACTGGGGGTTATGTAATTA 1004494 28 100.0 32 ............................ AATCACGTTAGCAGCTGCTCCCAACGAGGGGT 1004434 28 100.0 32 ............................ TTAAAGAATGGCGCCATTGCTACTGCGCTGTC 1004374 28 100.0 32 ............................ TTTTTAAAACAGAACTCTAATTGAGCATCAGG 1004314 28 100.0 32 ............................ ATTCTGACGCATTATCCACAGCTTTTTGTGCG 1004254 28 100.0 32 ............................ ATATCCAAGGTGGTGGATTTTTTAAATATAAA 1004194 28 100.0 32 ............................ CTACGATATGGTTATTAAATTGATTGCAATTA 1004134 28 100.0 32 ............................ AATGAATATGAAAGACCGAGATTATATATGGC 1004074 28 100.0 32 ............................ CCTACCAATTTTTAAGTGATTCAACTGTACTT 1004014 28 100.0 32 ............................ TTTAAACTCCTTGTAATCCCACGTGTTTGGCT 1003954 28 100.0 32 ............................ GTCAAAGCCAAATGGCTTATCGCTTGTTAGAA 1003894 28 100.0 32 ............................ TGCCGCGTATGCAGCAAAATATGTCTACCCTC 1003834 28 100.0 32 ............................ TTGTTGAGAATGAAAATAATGATCCGAATTTG 1003774 28 100.0 32 ............................ CAATAACTTCTTGATTGGATTGTTGATGATGT 1003714 28 100.0 32 ............................ AATTGAAGAGATTGAGAAAGCGATAGATACAT 1003654 28 100.0 32 ............................ ATTTTATCCACTTGTTCTAAGAAGTAGATAAT 1003594 28 100.0 32 ............................ CAAAAGATAATCCATACTGGCATTTGCACTTC 1003534 28 96.4 32 .............T.............. AATATCAAACGCCGTTTTGCCGTCCTTCATAG 1003474 28 96.4 32 .............T.............. GTTGAACTTACCACCCATACCGGCGATAACGC 1003414 28 96.4 32 .............T.............. CTCTAAATCCACTACCATATTTTTATCAATGC 1003354 28 96.4 32 .............T.............. TCTGCATGATCGTAAAGATTGCTATTCCCTGC 1003294 28 96.4 32 .............T.............. AATCGGCATTAAACGACTTCCAGCCTCTCGAG 1003234 28 96.4 32 .............T.............. GCCATTCAGCAACTCTTTTACCTGCTCTAGCA 1003174 28 96.4 32 .............T.............. ACTAAGCGCAGTAAAATCAGGTGAAAAAGCGC 1003114 28 96.4 32 .............T.............. ACCATTGCCTGATAACTGCCAGGTGCGCGCAG 1003054 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 44 28 99.3 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATGATTACAAGCATTATGGCAGTTTTAACAGGTTGTGCTTCTGTTGAGCAAGATACCGTGGTGCATGATTTTACTGCATATGGCAAGCTCAATGAGCCTTGGCGCATCGTGGTCAAGCATGATGATCAGTTAGAGATTGAAGGGGTAATGGTTCGCGAGGGCACATTGAAAGTGACGCGATCGGCATATGCAAAAGGTGTTGAATTCTCAGGGGATTATGATGGGCAGCCATTGACATTAAACATCCGCTCATTGAAGTGTAAAGACAGCAATGGCGATGAAACAGACTTCACAGCCATGTTCTACTATGGCAAACGTACTTATAAAGGTTGCGCGGTTGCAGGTGCGATTGAGCATGCGGACACTTAAGACCTTTATGGTTTGATCTTTAAAAATTTGGATAAATATCAGTAAATTACATGTCATTGGAAAAGGATTGGTTTTATGGCTATAAACTGCCGAAATCATGATGTTTCCAATGGCATTGTTATATTTTTAAA # Right flank : GACCGGAGCTGTGCCATCGTAACGGGATTATGAACAGACAGTAAAACTAATTCGTTAAGTTACTCACCATAATACGCCCAAAGCAGGACAGGTTTTTTCTTGGTTTGTAAAAGCTTGTCCACTTTGCGCATTGTGTCATCATCCACAACCGGGCAGCCTTGGCTGAAACCTAAAGGCAAATAGTTTGGGAAAGTTTCTTCATTCGGAATCATCTTAAAAGAGTGGAGCACAATGTAACGCTTAAAGGCATTGCTGTTACTCGCCTCTAGTCCATGGAGTTTGTAGTGAATGCCAATTCCCCATTTGCTCGGTGCGCGGATGCCCACACGGTATTTACCGAGAGAAGATGCATAACTATTCGGTTGATTGCTAAAGACAATGTTTTGATTATCACTCTCAAAGCCTACATTGCCATAACCATGGGCGACGATGCTTTTGATCTGCGGTGATTGTGTTTTAAAATTCCACACAAAAAAGCGATCTTTACCAGAATGGCGCGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //