Array 1 71059-70502 **** Predicted by CRISPRDetect 2.4 *** >NZ_QWEQ01000003.1 Emergencia sp. 1XD21-10 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 71058 32 100.0 35 ................................ CCATTGTTTATAGCCTTGGAAAGATGGTCCAATGT 70991 32 100.0 33 ................................ TGCAAACAGCTTAATCCAGTCATCAAGGTACAT 70926 32 100.0 32 ................................ GGGCATAAAATCCGTCACACAGACCCTGTTGG 70862 32 100.0 34 ................................ ATTTATGGGAATTGCGGCAGTAATTGCAGTAAAC 70796 32 100.0 34 ................................ CTTATTAAGAATAGCCTGCTCGCCGATATTAGGT 70730 32 100.0 36 ................................ TACTTGACCGTCTTCTTGCGTATGCTCTGTCATCGT 70662 32 100.0 33 ................................ GTGTGGGATTATATATACTTCCATATTGACTGG 70597 32 100.0 32 ................................ ACCTCATACCCTTTACTTCTGCCTACGCTCAG 70533 32 90.6 0 .............C.....T.C.......... | ========== ====== ====== ====== ================================ ==================================== ================== 9 32 99.0 34 GTCGCGCCTCTTGTAGGCGCGTGGATTGAAAT # Left flank : GCTTTAATTGACAGTGATGCACTGATTGATGCGATCGAATCGGAAAAGGTTGGATTTGCGTGCCTAGATGTAGTCGAGCACGAAAGTGGTCTGTACTATTTTGACCGCATGGGTGAGCCTCTGGGAAATCCGCGATTAGCAATCTTAAGGTCTTATGCCAATGTTATCGTTACATCTCATATGGCGTTCTACACGGATGAAGCGGTGGCAAATATGGCAGAAAACTCTATTTTAGGAGCAAAGAAATACTTTACAGGTGAAGAAAATCCTTTTGAGGTATAATTGAGACAGATAAAATACACTTGTCCTAAAAATATTTTGGAAAAGATGAAATTTTGGTGGTGCGAAAATGAAGTGAACATGACTTTCTGGGATGTTTCGCACCTGTAATTCAATGAAAAGAGGTGGTCTTAAGAGAGTTTTGACAGTTTAGTAGTATGTAGAGATAGAAATAAAACAAAAAATTGATAAAAATTATAGAAAACTTTTATAATTTTGCA # Right flank : AATGTCGCTTGCTGTTCTTCCGATTAGTACCACGGTGAAAAACCAGCAATAATTTAGAAAATCCCCTATCACTACAACGAACCTTGCAGCAATCTTTTCCGGCAATTAGCATATCCGCTGCACTTTTCTCATATATTACACCAAATGAGAGAGGTGTTTTTATGATAAGGAAGAATCGAAAAAGAGCGTTATGCCTACTTTGTGCCCTTTGCCTTTGCGGAACTGGTGGAATTTTAGGTGTGAAATACTATTCTAACCCGCAGGAGCCTGTAGTGCTGGAAACAGTGTCTGATAGTTTGACGTCTGAGGGTGCTCCAACCGAAGAACAAAAGAAAGCTAATTTGAATTTAGATGTAAAGGCAGCAGTACTCATTGATGCGGACACGGGTAAAGTCCTTTATCAGCAGGACGCTCACAAAGAGCTGCCGCCAGCGTCAGTAACCAAAGTTATGACCATGCTTCTTGCAATGGAAGCAGTTGAAGATGGGAAAGTTAAATTG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCTTGTAGGCGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA // Array 2 73224-72511 **** Predicted by CRISPRDetect 2.4 *** >NZ_QWEQ01000003.1 Emergencia sp. 1XD21-10 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 73223 32 78.8 37 ......................-.C.G..CGCC TTGCCAACTTAAAGAAGATTGGACAGAACAGTCGTGC C [73195] 73153 32 78.8 34 ......................-.C.G..CGCC GGATTTGAACAGGGAGAAACAGGTTTATTTGCAC C [73125] 73086 33 100.0 34 ................................. GCTTTGTTGATCTGATTCATACAGTGCTACATCC 73019 33 100.0 35 ................................. TGGTAATCCTACGGAAATACTTGTAAGCACAGAAA 72951 33 100.0 34 ................................. CGTTTGATGTGGGAGATACAATCATGGTGTCAGA 72884 33 100.0 34 ................................. GACTCACCAGTTTCGCCATCAAAGGTGTTTGCTA 72817 33 100.0 35 ................................. GCTGACTGATGAGAGTTTTGGGCGGTTACAAGAGT 72749 33 100.0 35 ................................. CGGTGTTTTTCCGGAGTTTTGAAGGATTAGCAAAA 72681 33 97.0 36 ...........C..................... AAGCAAAAATACTTGAAAGTTGCTTCTTCGGAAGTA 72612 33 100.0 36 ................................. CAGCCGCCTCCCCACGCCATCAGGAAGAACAGAAAG 72543 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 11 33 95.9 35 GTCGCACCCCGTGAGGGGTGCGTGGATTGAAAT # Left flank : ACCTGGAAGGCTATCCACCGTTTTTATGGAAGTAGGAGGTTTCAGATGCTAGTATTAATTACATACGATGTGTCAACACAGGACAAAGCTGGAAAGACCAGGCTTCGAAAGGTCGCAAAGGAATGTGTCAATTATGGTCAGCGTGTACAAAATTCGGTATTTGAATGTATAGTGGACAGTTCACAAATGCTGCTCTTAAAGGATAAACTTTTGTCTTTGATTGACGAAAGACAAGATAGTGTCAGGTTTTACTATTTGGGAAATAATTATCAAACAAAAGTAGAGCATTTCGGAGCCAAAGAAAGTTATGAAGCTGAAGGCGTTTTGATGGTTTAAGAAAGGTGCGAAAGGCAAGTGGACATAAAATCCTTGGGCTTTCGCACCAGAATTATAGACATAATAGTTACTTTTCTGGAAGTATATGTATTTATACTTTTAAAAATTATAAAGAATTTACAAATAAATGGTGATTTTATTGGGAAATTGGCGTTTATTTGCAC # Right flank : GCGCCGGGGTTGTAGTTACCGTAACCTTCTATGATCACTGGTTCCAACTTGTGCCTATTTATAGTCACAAGTTGGTGGCTGTGAAAATAGTAAAATATATAGAATTTCAGTTAGTTTCAATTTATATTCCTCTATTAAAATGGACGAGAGATTATTAATTTTTAATAATAGATTTTGACAATCATTCTTAAATGCTATGCATTCTTTTTTATTTGTGGTATGATAAATGCAAGTAAATGCGAGAGGTAGCGACATGAAATTATTTGTATATAGTATGAGAGACTTTGACGAAAAGCCTTTCTTCGACAAATTTTGTGAAAAGTATGATGTGGAGTATGGTTACACTGCAGAAACGCCTTGCTTAGCAAATGCAGAGTTAGCAGCAGGCTATGATGCCGTGGATATTATTACAACCGTTATTGACAGAGAGTTAATTGATAAATTTTATCAGCTTGGAATAAAATGTATTTCGACTAGAACGATTGGATATGACCATATTG # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGTGAGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.00,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : NA //