Array 1 561179-557570 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029295.1 Mycoplasma phocidae strain 105 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 561178 36 100.0 30 .................................... TATACAAAGAAAAACAATTGACATTGACAA 561112 36 100.0 30 .................................... ATTATATCATTTAACATAAACATCACTCAA 561046 36 100.0 30 .................................... TGGTTCTTCCAAAGTATGAGTTTTTAACAA 560980 36 100.0 30 .................................... TTCTTTGCCATCGTCGTTTGTTTTAATTTT 560914 36 100.0 30 .................................... AATTTTTTGAATGATATTTTGTGTATTTGA 560848 36 100.0 30 .................................... CCACGGACGTTATATTATCAATAGAGTTTT 560782 36 100.0 30 .................................... TTGTCCAATTTTAAAAAGAGCTCATTTTCC 560716 36 100.0 30 .................................... TCTTCATCTTTAAAATCAGGGAAGGTACTA 560650 36 100.0 30 .................................... TGGCAAAAAAGGATTTTTTATGTCTTTAAA 560584 36 100.0 30 .................................... AGCAGCCGAAACTAAATCCAAATTTTGATC 560518 36 100.0 30 .................................... TAATTCTGATTTTAGATGGGAAAAAGTTAG 560452 36 100.0 30 .................................... AAGGTTGATTTGCTTCCAGACTTGATCGAA 560386 36 100.0 32 .................................... AGTAATGGTTGAGAGAATGTGGTGGAAAATAC 560318 36 100.0 30 .................................... TAGTAATTACAAACTTTATATAAGATATAG 560252 36 100.0 31 .................................... TAACGCTTTGTTAAATCCAACAAATAGTACT 560185 36 100.0 30 .................................... ATATGAATTTGAAGGGTATGACCTAATAAT 560119 36 100.0 31 .................................... AAATTCTATTAACTTCTTTCCCCATTTTTTA 560052 36 100.0 31 .................................... CAATTTTTCAATTTAATAGCAATCAAAATCT 559985 36 100.0 30 .................................... TCTTCTTCACAAGAGACCACAACTAGTGGC 559919 36 100.0 30 .................................... AATTATCAAAGAATGAATTATCGCATATAC 559853 36 100.0 30 .................................... ATATTAAAAAAATTTAGTTTTTACATTTCT 559787 36 100.0 30 .................................... TCTAAAATTATTTTCTAAAATAGAATCCAC 559721 36 100.0 30 .................................... ATTAATACCGCTGTGAATGGAGTTAAATTA 559655 36 100.0 31 .................................... AAGCTTTACGAGTGATGACTAAATAAAATCA 559588 36 100.0 29 .................................... TATTGTTATCGGCTCTTTTAATGCGTTTA 559523 36 100.0 31 .................................... AGAAACTTCACTCAAGCCAAAGATTTGTCTA 559456 36 100.0 30 .................................... TTTGGCAAGATTAAAATTTACAACGTTTAT 559390 36 100.0 30 .................................... GAGTTTACTGAGATTATGATGACGGTGGTT 559324 36 100.0 30 .................................... AATTTGTACCACTAAAATCAATATATAAAT 559258 36 100.0 30 .................................... ATGTTTTAATTTATACACTATAACACTTAT 559192 36 100.0 30 .................................... AATAATATTTTAAAAGCTTTTGGCGATAGG 559126 36 100.0 31 .................................... CTATTTGCTGATAAAACTGAAAGCAATAGCG 559059 36 100.0 30 .................................... TTCAATTGAAATATATGTTGTGTCTGAAGA 558993 36 100.0 30 .................................... AATAGTAATAGCGATATCAGCACCAGCGGT 558927 36 100.0 31 .................................... TTATAATGTGATAAATGTGTTAATACTCATT 558860 36 100.0 30 .................................... GTTTAAGATTTGTGTAGTTTGCTTTTCTAT 558794 36 100.0 30 .................................... ACAAAATTTTAATATAGCTTTGATGAATAT 558728 36 100.0 30 .................................... TTTTCTTTTTCGGTAAATTTGCTCATTTTA 558662 36 100.0 30 .................................... AAATAAAACCACGTCGGCGTCTTGTTCAAT 558596 36 100.0 30 .................................... AAAAGACGCAAAATAGAACATCGTTTTCTA 558530 36 100.0 30 .................................... TTTAGTGAAGCAGTTGAGTGATCTCCTTTT 558464 36 100.0 30 .................................... ATAAATATCCAGACTGAACCAAACCGATAA 558398 36 100.0 30 .................................... AGTTACATTTTTTATATTTATTTTTTGATT 558332 36 100.0 30 .................................... TATTAGTCCTGATAAAATAATCATATTTGC 558266 36 100.0 30 .................................... TTCATTGGATTTTAAATATTTAGTTGAATT 558200 36 100.0 31 .................................... ATGAATAGCATTAATAACGAATTTAAACATA 558133 36 100.0 30 .................................... TTCATTGAATTTTAAATATTTAGTTGAATT 558067 36 100.0 30 .................................... ATATTTATTAAATGAGTATTCAAAAATTTC 558001 36 100.0 30 .................................... TTTATTGGAAATGTTAAACTCACCTGTAAA 557935 36 100.0 30 .................................... TAAATTCGGAGAAATGGTAGCGGCTTTTTC 557869 36 100.0 30 .................................... TTTTCTTATTTTTACGGACCTATCTTCACA 557803 36 100.0 30 .................................... ATTACAACTTTTAAATATTTCATCGCTTCC 557737 36 100.0 30 .................................... GCTTTAAGGTCAGTATTAACGATAAAGTTA 557671 36 100.0 30 .................................... AATGGCAATTTTAATATCGGCGGTTCTGTT 557605 36 75.0 0 .......C..........AA.A.C...TC.....TA | ========== ====== ====== ====== ==================================== ================================ ================== 55 36 99.5 30 ATTTTAGTGCTATGCTATTTTCAAGCAAGATAAAAC # Left flank : TTGAAAAAATAAATAATCAAATTGACCCTAATTTTCTTAACCTAAATTTTGATAAAAGTAAATTATTTAAAAACTTACTTGACATTAATCAAGATGCTTTTATCAATAAAGATAATTTAGACAAATGATTAAATAATTATGGGACCGATAGTTCTTCAAAACCTATAATTATTTTAAATAATCTTGATTTTGTTAATTTTCAATATTTAACAAAATACTTAAGCAAATTCTATTTTATTATTTTAACTAATAACATTTTTAAAGTTGCAAATAATTTTGATGAATTAGAACAGTGTGCGATTGTTGAAAGAAACGAAGGAATTTGTATAAATTCTGGTTTAGCAATTCATAACTGAGTTGAGAGTGAACAAAACAGTAGTTTAGAAATTAATGAATCCTTTAACATATTGAAAAATGATGAATTTATTCAAATTAAGCTAAAAAAATATTTAATTTAGTCAAAAAATACTCAATTTTATTGAAAAAATACTAAATTTGAC # Right flank : AATTTTTTTGTAGAAGCAAATTAAATGGAACTAGGCATATTTACTAGATATTTTAATTGCAATTTAGTAGCATTGTGAATTTAATGATAGTGTAACTTTAATTCATAATTAAGTTATTTTTAAAAGTAAATAAAAAATACAGCATGCTTTTTTGGCGAATGCTGTATTTAATTTTATCTTTTCGATTTGTCATAAGGTTGACCGACGGCAGCCGGTGCTTTTGAATTCTTCGAACTAAATATTAGAATTAGGATAGTAAATATATATGGAGTAGTACTAATTAATCTTGAGTAGTCTTTGAAGTCGTTGAAGACTCCTTGTCCAGCTCCGATTTGTTGTGAAGTTGAGAAAATAAATGCGAATACAATTGAGAAGACGAAAATCAGTGATGATTTTCATTGGCCCATAATTAAGACAGCTAGTGCCAAGAATCCTATTCCTTCTACCCCTCCGGAGAAGACAGATCCCCTTCATTGGAAGAAGATTCCGCCAGCAATTCC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAGTGCTATGCTATTTTCAAGCAAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.80,-2.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [76.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //