Array 1 22649-22437 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCH01000032.1 Microcystis aeruginosa NIES-3787 sequence032, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ======================================== ================== 22648 47 97.9 31 ........T...................................... CTATCTTATCCTTTAAGCTAGAAAATTCAGA 22570 47 100.0 40 ............................................... TAAGTTCTTCCAACTTCTTATTTAACTTATCAATGTCATC 22483 47 95.7 0 .................G..........................C.. | ========== ====== ====== ====== =============================================== ======================================== ================== 3 47 97.9 36 CTGAACATCTTTTTGAGTAGGATTAGGGATTGTCTCAAAAAGTTTTT # Left flank : CTAAATCAGTGTTAGAACCGGGTACTAGCATTTTAACAGATTGTTTTCTGCTGGCAACCGATTCGATATTTTTATCGAGATTACTTGTCTTCTGTATTCCTTGTCCGTCGGTGTGTCCAATTACTTGAATAAAGTCGATTTCTCTGTCTTTGGTAATGGTTTCGATAGCGGGAATAATGCGCTGACGAATATAGGTTTTTAAAGCAGGGTTTAATTCAGCACTTCCCGACTGAAATTTAAATTTTCCTGATTTTTCATCGATAACTATCGGGGTTGCTGTTTGCAGTTTTCGGTTAGCTTCCTCCAGTTTGCTGATGAGATTATAGGACTGAAAAAGTGCCAAGAGGAGAAATAAACTCAGAATCATGAAAGCATTGGACATTAAATCGGTAAATGCGGGATAAACATCCACCGATTTATCTTCATCCCGGTAGTAGGTACGTCTAGACATAGTTACTTATATGTTGGTGAAGTTATTCAAATAGGGTGTTAATGTCATC # Right flank : TAAGTTCTTTCATCTTATCCTTTAAGTTAGAAAATTCAGAACTCATTTCGCCAATTTTCTCCAGTTCTGCTAAACATTTTTGAATTTCTCCATAAATATGTTCAATCATTTTCTGATTCGATTTATTTTCCTTAGCGATAACTTTCTCTAACTTATCTCGCAAAGATTCTAAGTTAGCAGTTAATTGACTGGTGTTGGTGTTCACTGCGTTAATTACTTGAGAAAAATCTGATTTAAGGCTGCCAAATTGATTGGCTGTTTTCTCAATAGATTGGGAAACTGCTTTTAATTGTTCTGAGTTCTTAGTTAATTTATCATCAACTACCATCCCTAAGTTATTGCTTAAAAAGTTTAAATCAGACTGTAAGCTTTCCTTGACTTGAGTAACTTGCTCTGTCACTGTATCAATTAACTGAGACAGGTTAGCATTAGTCACATCGAGATTATTGCTAGAGCGCTCAATCCCATGGGAAGCTGTGAGAATTGTATCGGAGGTTTGG # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAACATCTTTTTGAGTAGGATTAGGGATTGTCTCAAAAAGTTTTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.50,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 112694-112278 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCH01000006.1 Microcystis aeruginosa NIES-3787 sequence006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 112693 36 100.0 42 .................................... AGTAAGAGTAGGGCTAATTCATGAATTAGCCCTACTTTTTTA 112615 36 100.0 38 .................................... TTCACTGGCTCACCACCATGCCAAGGATTCTCAATAGT 112541 36 100.0 40 .................................... TCTTTGCCATTATTAGCCCTGCTCGGGCCCAAGAACTCAA 112465 36 100.0 39 .................................... CAGAGCCGTAAAATCGACGGGCAGAAAATGAATTCTACT 112390 36 97.2 41 ...............G.................... TTAGTCTGATTTTTTAATCAGTGTAGAAAAGCCCCCCTCAA 112313 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 6 36 99.5 40 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : CACTTTTTCTCGGTCAATGATTAGGATAAGTTATAACTTAAAAATTAATCAACAACTAAAGCTTATGCTTGTAGCTAAGTGAAATCATTGATTAAGAGACCTGTACTTTTCAATGACTTTTTCAGCAGACCCTAATTAGCATTTTTATCGATTTTTGTCAAGATATATTTGACACAATTTATTAGAAAAAGGGTTTCTTTAGAAACCCTTTTTCT # Right flank : AGTACCCCTTGGAAAGTCTCATCGAGAGGGGAAGACAGACCCCCAAATCGACGCATCTCCAAAAAGGTGGTATTGGGGGGGGTAAAAGTCCCGATACCAAAGGGTAGAACCCTGACTGGGAGAGCAATCGACACATCTAACCAGAGAATCGGGGTTTTAGGTCGGGGAGAGGCTGCATCGATTTTCAACCAAGAGTTAGGGGACAAGCTCACCGTCCGTAGAGATTGGGGGGTGGTTGAGGAGGAGAACCTCCCATCACCAACAATCTAGAGACAGCTTCTTCGGAAATCCTATAGAAGCGCTCATCATCCTCTTGAGGATTGACCCTTTCTACTACTTTAGCGTACAGTTTCCGCCTCTCGATGTGTAATTAATTTTGCTTAAGTAGGGATTGCTGAATAAATCTAAAAACCTTGTTGGGTAAGACTTTTAGACTTTTTGTCAATCAAAAAAGACCAGAGATGGGAGTGATCAGGGGGAAAATTCAGGGACTTTTTCCC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 7181-8899 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCH01000029.1 Microcystis aeruginosa NIES-3787 sequence029, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================================================================================================================================================================== ================== 7181 35 100.0 37 ................................... ACAATTATGGTTTGACTGTTTTGGATGCCTTCAGTTC 7253 35 100.0 35 ................................... GATAGTAAACCTCGAAAGATCCTAAGTTCCCAAAA 7323 35 100.0 40 ................................... GCAACACAGACGGCTTCCCAAGCGGTCGCATCGTGTTCGT 7398 35 100.0 42 ................................... CTTTCGTGGGCTTCCCACTGCGGTCCGCGGCAGGGAATGAGA 7475 35 100.0 38 ................................... ACACAAAACAGCAATAACCAAGAGCCATTGCATGTTAG 7548 35 100.0 34 ................................... CCGTGTTTTTTGATTAGTGCACGCAGGATTGCGC 7617 35 100.0 38 ................................... GCGCGTTAGCAGCCGCAACCAAAACAAACCCTAAAACT 7690 35 100.0 37 ................................... ACTTCATCTCGTAAGCGATCCACCTCCGTTTGTAGAA 7762 35 100.0 31 ................................... ACTAGCGTCCCGAGCGTAGCCCCTTCCCCTT 7828 35 100.0 45 ................................... TTTCTTCTTTTATTAATTTATTTTTCAACAGCGCTTGCTTCCACT 7908 35 100.0 35 ................................... GAGGGTCAGATTCACAACGAGAGCTTGTACTGTAG 7978 35 100.0 36 ................................... AAGGTGACACCCAATTGCCACATGGTTAATCCCTTG 8049 35 100.0 36 ................................... ATTGTTGGGGTGGGGGGGTTGCTTCTCCGTACTCTA 8120 35 100.0 36 ................................... ATTTGTGCGGCTATTTGAGCAATAGGCTGTCCCAAG 8191 35 100.0 43 ................................... TCGTTGGTCAAGCTAGTTCCAGTGAAGCTGGTGTTCGACCCGC 8269 35 100.0 35 ................................... GTATCTGTTGAGAGATAGAGATAGGGATTAGGATT 8339 35 100.0 54 ................................... TTCTGGGTTCCCCTCTAAGTCGACATTGTAACCGCCGACCTTGGTTAGCAAGGT 8428 35 100.0 35 ................................... CTTTTATCTCAGAATACACTGGGGTTTTATACCCA 8498 35 100.0 38 ................................... CCCTTCTCCCCACTCGCTTCTAGATCGTCTACTACTGA 8571 34 82.9 182 ..........................-.G..TCTG CTGAAAAAGTAGGGGCGAAGCATTCGGGCAATAACCTATCGGTGAAACCGGAGATTTTCTATCCGAATGCTTCGCCCCTACAAGACGCGGGCTGATGAAGACGCTAGGTTTTGAAGCACGATTCTCTCAAAATCTTGCACCTGTGGGAGCAAGAAAAGCCACAAAACCCTTACCATGCCTAC 8787 35 80.0 40 A...C..T..A.....C..CC.............. GTTTTTGCTAACCAATTGTTAGCTTTAGGAACCCTCCAGA C,C,C [8792,8800,8807] 8865 35 85.7 0 ..........................TT.AA...A | ========== ====== ====== ====== =================================== ====================================================================================================================================================================================== ================== 22 35 97.7 45 CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Left flank : GAAAAATCGGAGTGCTGATGCGAACACCGAAAGGATGATGAGAGATCAACCCTGAGCAACAAATAGAGAGCTACCAGAGTCTGCTGCTATTAAGGTAAAGCAACTAAAATATCGGGAGCATCTCATTTATGCAAGTGAGTAATTATACTTGTCCTAACACTGTTTTCTAGCAAGGCTTTCAAAATAGCTTGACGTAAAGATTTAAGGGTTATAAAGGTGAGATGGTACTAGGGCAATGATCGCATAGGCATTAGCGTGGAACAAATTCTATTGTTTTATGCCGATGGAATGGGGGGTTTCTCAACATTTTTCGTGGGTTAGACACAATGCCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGGCCAGCAAGACTTTGAGCCTTATGACTGAGGTAACTATTGAGAATCATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATTGCTGTACAATCCCTATACAGCCTAGTTTTGCCAAGCTAGT # Right flank : ATCTCTGAGTTGGTTGGCATCGGGCCAATTTACTGAATTTGCATAGGGTTTAATGAGTTTAATTGTTGAATAAATGTAGCGCGATCGCGCTGGTTAACTCCAAAAATTGTTACTGTTTGATAAGGTTCCTGTTGTGGGGGAAAATTAGATTTAATTAACACATAAGAAGGTGTAGAAGCAGTTTCTCCTTGTCGGCTGATTCGTCCGCCAACATTAGCATTTCCATTTCCTTCTTGATTGACACCTTTAAAGCCACTACTATAAAGGAAATCTAAACCTTTTCCCCGTACTTCTGACATTAATCCTTCGTTTTGCCAATTCTCGACAGTTCCAGGATATTTTAAACTAGGACAAGAAATTAAATAAATTTGAGCCTGACTATTCAAAACATCTTGAGAGCGATTGCCAGGATTTCCGGGAGTACAATTAGCAGGATATCCTATGGCAGACTGTAGGGCAAGTAAAGAATCTTTTACCTCTCTAAGAAACTGCTGCCATAG # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.69, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAACTTCTTAGCAAGTTTAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 25862-23182 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCH01000029.1 Microcystis aeruginosa NIES-3787 sequence029, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 25861 35 97.1 38 .C................................. TGGTATCCAAAGTTTGGAAAGGTGTACAGTGTTTTGAC A [25856] 25787 35 100.0 40 ................................... TTTGCAGCCGCCATCATTCTGACCGTATGGGGAGGCCCAT 25712 35 100.0 38 ................................... GCTGTCCTTGCCAGCATCCCAATCCCTTCTCGTATCGT 25639 35 100.0 38 ................................... AATTCAATTGATTTTTTTGATAGTCCACCCATACCTTA 25566 35 100.0 35 ................................... ACCTGCAATCTCCAAGAGATTGCGAGTATTTTAAA 25496 35 100.0 37 ................................... ATTGGCAGACAACAGAAGTTGTTCTCCTAGAACAGGT 25424 35 100.0 40 ................................... GCACTATGGACCTTATGCTTATGGCTTGATTACACAAGCC 25349 35 100.0 39 ................................... AGTGCATTGTTTGTTATGAAAAAACAAATGTCTTTGCTT 25275 35 100.0 41 ................................... TATTCCTAGAAAGGAATAATCTTCGCCATACTATTACCAAT 25199 35 100.0 35 ................................... ACCGTTAATAAGTTATCTTAATCTTAAGAAGACAG 25129 35 100.0 38 ................................... TCTTGCTATTCCCAAATCCATCGCAAGATGGACGGTTG 25056 35 100.0 36 ................................... CTGAGAATCCGAAGAAATGGCTGATAAGCGATTTTT 24985 35 100.0 39 ................................... AACAGCTGAAGCCAACAAGATTTTTTTTCAAAATCTAGG 24911 35 100.0 41 ................................... ATTGTATTTTTCCAAAAACTTGCCGCACGCACTCTAGAAAG 24835 35 100.0 40 ................................... AATCGAGCTAGGAGTGCAAATAACACTCCTAAGTCGGGTC 24760 35 100.0 44 ................................... TATCAAAAGGGACATTGGGCCCAGCCATGTACGCAGTATGCATG 24681 35 100.0 33 ................................... CCTCCCCGTTCCGGAGGGGGTAAAGCCCTTTGT 24613 35 100.0 38 ................................... ATGAGGCAGCCCTAAAGGCTTTTCACCGGCTCCTAAGC 24540 35 100.0 42 ................................... CCTATCGAAACCGAAGAGGACTACCTAAAGTATATGGCGGAA 24463 35 100.0 39 ................................... AACAAAGGTCGCCGGCTACAATGTCGACGACTTAGACTT 24389 35 100.0 35 ................................... CGGGTAAATCTTGAACAGCGCACTGTCAAATACAA 24319 35 100.0 41 ................................... AATGAATTTTTAATCTTCTACGGCGCGTTGCGCCATTTCTC 24243 35 100.0 37 ................................... ATGCTGAAAAATGATAAAATCAAGGCTAAGGGCAAGC 24171 35 100.0 42 ................................... TCTTGGTAATAGCGGCATTCGCAATTGCTATCGCCCTCATTT 24094 35 100.0 40 ................................... CTTTTGTTGCATACTGACGATGCGTTTCACCCCCGTCGTC 24019 35 100.0 36 ................................... TAGGCGTCATGGTTTTCAAGGTGGTTGAAGTACCAC 23948 35 100.0 43 ................................... AGACCTAAAAATAGCCGATCTCCAAGAGATCGCGACTATTCTC 23870 35 100.0 41 ................................... GGGAACGTTCCCGGTGTGTCAACAGCCGGCAATATACAACT 23794 35 100.0 39 ................................... CAGGGCAATATGTCGCTCTTTCCAGCAGGATCCTCGAAA 23720 35 100.0 34 ................................... AAGGAGACAACAACATGCAGTTGACTAACGCTCA 23651 35 100.0 32 ................................... GCTCACTCGGATTGAAATAGCTGCTTATTCCC 23584 35 100.0 40 ................................... ATTGTACAAAAAACTCAAAGTTCAAAAAAAGGAGACGATC 23509 35 100.0 41 ................................... AATAGTCCTAATCGAGTTAGGAGGTGTTTTGGCCCCTGAAA 23433 35 100.0 37 ................................... TTGATCGCCAGCGGCGGCACCTACGACACAGCAAAAG 23361 35 100.0 40 ................................... AAAAGTTATTGGGAAAGCCGAGGGATCGGCTTTATCGGCC 23286 35 100.0 35 ................................... ATGATGGCTTTAAGAGGAATGATGAATGATATTTT 23216 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================ ================== 37 35 99.9 38 GTTTCCATTAATTAAACTTGCTAAGAAGTTAAAAG # Left flank : GAATGACTGAAAAAGTTACCCACTCTCAAATTTCATCTCAGATTTCTTACCGAGAAGCCATTCAATTACAAATTCGGCTGTATAAACGTAGCTTGCTGTCATCTATAGCCTATGAACCTTTCTTTCGAGCCTCCTAATGTTAGTATTAATTGTTTACGATATTCCGGACAATAAAAGACGCACTAAATTATCTAACTTTCTGGAAGGATACGGTAAAAGAGTACAGTTTTCTGTGTTTGAGTGCTTTTTATCTTTAGCGGAAATGCGAGAACTTTATGAAAAAGTCAAAAAAAAAGTTAAACCAGAAGAAGATAATGTTAGATTTTATTGGCTCTCAAAAGATGCTACCTCAAAAACTTTAACTATCGGTAGCAAACACCCTGAACCCCCTCCACAATATTATGTAATCTAGAAAAAACAAAATCTTATCTCTCACCTTTATTAGTAAAAAAATCTCCTTAGAAAATTAAAGTAGGAGATTTTTTATTCACTAATCGTTA # Right flank : ACTAGCTTGGCAAAACTAGGCTGTATAAGGATTGTACAGCAATTTTTCGTGGGATATTGAAAAGCATAGACATTATTAATAATGATTCGCAATAGTTACCTCAGTCATAAGGCTCAAAGCCTTGCTGGGCAAAGCATCGACGCACCTCAACGAAAACTCTAGATTTTCAGGCATTGTGTCTAACCCGCGAAAAATGTTGAGAACCCCCCCATTCCATCGGCATAAAACAATAGAATTTGTTCCACGTTAATGCCTATGCGATCGGGAGCATCTCACCTTTATAACCCCTAAATCTTTATGTCAAGCTATTTTGAAAGCCTTATTGGAAAACAGTTTTAGGACAAGTATAATTACTCACTTGCATAAATGAGATGCTCCCTATGCGATTCCAGCTTTAGCTTATCTAGTGTGCAAAGCTAGTTTTTGAATATCTTTTTGTCAACTTCAACCCTTAAAGTATATCTTATATTAATTTATGTCCACTTTATATATAGTAGAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAATTAAACTTGCTAAGAAGTTAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 531-203 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJCH01000093.1 Microcystis aeruginosa NIES-3787 sequence093, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 530 35 100.0 41 ................................... CTTTCTCCTTTGCAGATGCACCTTCACGAGCAAGCTTTCGT 454 35 100.0 36 ................................... TAACAAAACGCTGGGATCAACGCTAGGAAAAGAAAA 383 35 100.0 41 ................................... TTCCAGCACGCTAAGACGACCAAAATGAGTCCGAAGAACAG 307 35 100.0 35 ................................... ACAATTTGCTGCAACCATTGCTGGAATAGTAACGG 237 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 5 35 100.0 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : GCGGCGGAATGAAGAGGCCAATCAATCTGCTATTACCGTATCCCAGCAAAATCTCGATCGAGAATTTAAACTTACTCAGCTTAAGGAGAGAATCTCCTCGATCGATGATCGTTTATCCTCGATCGCCGTCGTTCGATCGCCTTTTGCCGGATCAATTAAAAGGATAAAAATCGAAAGCCAATCTGATAATACTCTCAAGGTCACAATTTCACTAATCACGGATTAATCAGTCATCAGTTATCAGTTATCAGTTATCAGTTATTAGTTATTAGTTATCAGTTATCAGTTATTAGTTTGTTATCAACATTTTTCGCGGGTTAGACGCAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGCAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAGTATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCAAAGCTAGT # Right flank : CAATATGTAGGGTCAATTCATAAATTGACCCTACAATTTTTTACTTCCAATTAGTTAAGCGTCTGGTACTAAATTTAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCAGTTATCA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //