Array 1 51957-53326 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011381.2 Moraxella bovoculi strain 58086 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 51957 36 100.0 28 .................................... CCGTTAACGTCTATATCCAAAAAGCCCA 52021 36 100.0 28 .................................... GGTAACACAGGTTACTTTCTCGGATGGT 52085 36 100.0 28 .................................... CGTGTGTAAGCTTGATTGCTGCCGACGT 52149 36 100.0 30 .................................... AATGAGCATTGAAAGTTTTTGCGCCACTTC 52215 36 100.0 26 .................................... CCATTTTTAACTGTTATCAGACAAAA 52277 36 100.0 27 .................................... TTATCGGTAAGTATGCTCTGCTCGTGT 52340 36 100.0 26 .................................... CAGAAAAACGGAATTGCCAAGGATGG 52402 36 100.0 29 .................................... TGATGTATGTTGGGGTTTTAAGCTCGCTC 52467 36 100.0 27 .................................... GCATGAGCGATGGCATTTTCTTTGCTT 52530 36 100.0 28 .................................... AATATTTATTTATCAGAATCGATGGTTC 52594 36 100.0 27 .................................... GTAAGCCACGCCGTTGTCACAAAATCA 52657 36 100.0 28 .................................... ATGGCGATTGGGCGATACCAGCCAAGCG 52721 36 100.0 28 .................................... ATTGTCATTTTTTGGTGTTGCTCTAGGC 52785 36 100.0 27 .................................... ACGAAATAAGCGATGACGACGAGCTAA 52848 36 100.0 27 .................................... AAACCTGTAAAATTTGTCCGATTTAGC 52911 36 100.0 27 .................................... TGTAGTATGTCTGCTATTGGGTTGTAC 52974 36 100.0 27 .................................... ATAGAGATTAAACCTACCCATGAAGAT 53037 36 100.0 27 .................................... AAGGGCTTTTTATGTATTGGCTCTTAT 53100 36 100.0 25 .................................... GAGATTAATGACATTACCGCCAAGA 53161 36 100.0 29 .................................... AGGATTGTATTTGCTTAGCTTCTTAACTA 53226 36 100.0 26 .................................... TGAGACCCCAATCAGTAACAAAAAAT 53288 36 91.7 0 .................G............C...G. | TC,A [53316,53322] ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.6 27 GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Left flank : TGGTTTTGATGTTGCCAAGCTTTGACATACAAGCAAATGGAGAAGATGTATGATAATCGTCAGTTATGATATCAGTGATAATAAAGTGCGTGGACGATTTGCCAAATTTTTAATGCAATATGGCGATAGATTGCAATATTCGGTGTATGAAATCCAAAACAGCGAACGCATTTTAAATATCATCACCGAAAAAATAAAAGCAGAATTTGAGCCTTTATTTACAGGGGCGGACAGTGTCATTATCTTTCGATTTACAGAACGTGAAGTATTAAGGTTTGGCCATGCCAAACATCGCAATGAGGATTTGTTGATTTTATAAAAAGTCTTGGAAAAAATGATGAGGTTTGTTATAATAAGAGAGCTAAAGCACGCTCAAATATTTACTTTGCAAACCTCAGTCTTAATGCGTGATTTATCATGTTTTGTCGGTAAAAATGATTATTTTTTGTGCAAAAAACTTGCTAATCTCTCAAAAAATCATTAAAAATACCCCAAAACGG # Right flank : TATGAGAATTTAAATGGCTGCGAAGATCAAAAGGCATTATTTCATTAAAATCCCAAAATCACAGATTTATTTTTCTAAAACACTTGTATCTTACGAATTATGATTTATAATATTAACTTATACATATATTACTAGGATTTATAATCGTGAGTACTACGCTGCGCCAGTTGCGCGCTTTTGTGTTGGTAGCTGAGCAGAACAGCTTCACAAAGGCCGCTGAGACATTATGCCTGACGCAATCCGCCTTAAGCGGTCTGATCAAGGAGCTTGAGCAGAATTTAGACGTTAAGCTGTTCGACCGCACCACACGAAAATTGCACCTATCCGATGCGGGCATGCGCTTATTGCCGCAGGCGCGCCGTGTGCTCAATGAGATGTCCGTGCTTAATGAAAAGGTCTCCAACCTAAAGTCCTTGCACCAAGGACACATTCGTCTGGCGGTCTCACAGCAGCTATCCGCATCGACGATGCCTAAGTTCATCGCTAAGTTCTGTGAGCTG # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 453313-452173 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011381.2 Moraxella bovoculi strain 58086 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 453312 36 100.0 33 .................................... AATCCAACAACTCTTGTACCTCGCCTTTGCTCC 453243 36 100.0 32 .................................... ACATAATACTTACGACCGTCTCGCTCGTATAT 453175 36 100.0 33 .................................... AGGTTAGTAATTCTTTGATTTCACTCTTATTAG 453106 36 100.0 34 .................................... TGTTGTTGTTGTTTTACTGTGTTCTGGGTAGGCT 453036 36 100.0 33 .................................... CTAAGACTTATATAGCAGGCGGTACTGGTATTG 452967 36 100.0 33 .................................... GGGCAAGCCCACGATGATAAATACTGTTAAGGC 452898 36 100.0 33 .................................... GCCAAAGATTGGAGCTTGGAGCGTCAAACATCC 452829 36 100.0 33 .................................... TTGATGGCTTTATCCCCAAGGTGGGCGAGGTTA 452760 36 100.0 33 .................................... TCGAGTTCATCGACCCACTTCTCGGCTTTTGCC 452691 36 100.0 34 .................................... CTTACTTTACCTTCTTGTTGGTACAGCTGTGAGC 452621 36 100.0 34 .................................... CTTTACCTCGTGAATAAGTAAGAATCTCACCTTT 452551 36 100.0 32 .................................... TTCCTTTTTACTAGGGTGCATACAGAATTGAT 452483 36 100.0 33 .................................... CTATTATGAATACGGTATAGGAAGTTTTTAAGA 452414 36 100.0 33 .................................... GGTGAGATTTCATTCACCTCACTAATTTGCGAG 452345 36 100.0 32 .................................... GCACGCTCTTGGCGAATACCTGCATCTTGTAC 452277 36 100.0 33 .................................... TTTACCAAGGTTGCCCTTGATCCAGCCTTCAAA 452208 36 86.1 0 ............G..................TCA.T | ========== ====== ====== ====== ==================================== ================================== ================== 17 36 99.2 33 GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Left flank : TAACTTATTTGATGTTAGCATTATGACAACAAAGTCTCTTAATTTGGGGTTTGATAAGCCTACAAAAGTGAGCATACTCACTAAACTTATTTAATCACAAGACAAATCAACATCTGCCCACAAATTAAAAATCACTATCAGCAAACGACCCAACCAATCTTGATCTGTTGTATGATACATCTGAATGAATTTCTCGAGTGGTTTCGTAAGCTTATCTCGACTGACGTCAATCGGAGTCATAGCCGCAAAAAGCATTTGCAATTTGGCAAAAAATCATTAAAATAACCATATCGTCTTGGACGACAAGATGCCGCTTGATTATTTAATAGCTTGTTTTTTTTGAATAATCCTAATGGGTGTCAAATTTATAAGTTATTGTTTTTTAAGGATATTTAATTATTTAGATTTCCTTAATCTACATTAACTTTTATTAAACAATTTTTGAACAAAAATTTGATCTGCAAACGTTTGATTTTACTCGTTATTTTTAAATGAGTGCA # Right flank : TTTGGATGTCCCATGCCATTCCGATGAAGTGTAGGACTGGCATGCGTAGGTGCGGCTGAATCTATACTCTTCACCGCACCATCATCCAACCTTGATCACCACACACCCGCCAGCATCAACTCACCTTTTCCACTACTACCAAACACAGCCCGCATTAATCACGCATCGCTTTTTGTCTTGAAATAAGGTAAAATACCTCCATTTATTTTTCGCTTATTTAATATTATAAAAAAAGGCAAAGCCATGACTGTCCAAACCTTCACCCCAGAAGCCCGCCCCGCCCCAAAAAAAGCCATTCAGGGCGAAAAACTGCGTGGCTATGATAAAGTCGCTCGCATTCCCATTAAGGTCATTCCCACCGTAGAAACCCCCAAAAAGCCCGACTGGATTCGTGTCAAATTATCCAGCCCTGCTGAAGTGGAGCGTATCAAAGGCACGCTACGCAAACAAAAGCTCTACACCGTCTGCGAAGAAGCCGCCTGCCCTAACCTGCCCCAATG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 472067-473068 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011381.2 Moraxella bovoculi strain 58086 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 472067 36 100.0 33 .................................... GTATAGATACATTGCTAGTCCTATGTTAAGTTA 472136 36 100.0 34 .................................... ACTGGCGGTGTAACTGCTTGCACTTGTTGCATAA 472206 36 100.0 32 .................................... AGCTGTAGCTGGTGCAATGTGGATTGCCATTG 472274 36 100.0 33 .................................... GTTATCTGGTAATACCCATGTATGGCTATCTAG 472343 36 100.0 33 .................................... GGTTGGAGTGGCACTCATCGCAAGCCCTGAGTT 472412 36 100.0 33 .................................... AATACTCCAAAGGGTAGCTCATCTTCGTCTAAC 472481 36 100.0 33 .................................... TTATGGCGGTTATCGTCATTGGTTCGTTTGTGA 472550 36 100.0 34 .................................... TAGATTAGCCGAGCAAGCTGAACAAGCCATTTAC 472620 36 100.0 32 .................................... TTACTAGCTAAGCCTTTAACTTCATCTGGAGA 472688 36 100.0 33 .................................... GATTATCAAGGCAATCAAGCCTACGAAACTAAG 472757 36 100.0 33 .................................... ACCGCTTCAATCTCTGCTTCTGTTGGCTTGTGA 472826 36 100.0 33 .................................... ACGTCAAATGTGACAGACTTACGAACAAGGTTT 472895 36 97.2 32 ....................C............... GTATTCACACGACCGTTTGCCAGCTCACTCAT 472963 36 94.4 34 .................C.................A ATCTGTAGATTAAATACATATCTCCATCTAATAC 473033 36 88.9 0 ...............................CGTG. | ========== ====== ====== ====== ==================================== ================================== ================== 15 36 98.7 33 GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Left flank : CATATCTTGCAAAAGACGTCTTGCCAAAGTCTATCGGCTTATTAGCAGCCATGCAATACCCATACAGCGTTCGGTGTATTTTGCCACGCTCAGGGCTGCCGATATGGACGCCATCATCGCACGACTAAAGACAATCATCACAAAGGAGGATGACGTTAAGATATATGAAACGGAATCATTAGAAAATGCACACATTCAAGGCAACCGCTCGCCAAACATACAGCTGTTCGGCGAGAATGGGGGTCAAATCATGTGGTAAAATGCTTGTGGATTGCGATGATTCTTGTTAAAATAACCGATAATTTGACGTTGGTCGACTATTTAATAACTTGGTTTTATATAAATAATCCTAATCGGTGTCAAATTTATAAGTTATTGTTTTTTAAGGATTTTTAATTATTTAGGCTTCCTTAATCTACATTAACTTTTATTAAACAATTTTTGAACAAAAATTTGATCTGCAAACGTTTGATTTTACTTGTTATTTTTAAATGAGTGCA # Right flank : CTTGTCTGCAATTATTTATAGAACACCATTATTAACAAATCCCGCCCTAATCTTGAGATGGTTTATAAATCTCAGGGTTGGGGCGGGTATTTTGGCTGTTTAGGCTATCGGTGAACTGCATTTAGGCATGATAAACTCCTTAACCATTTTTTAAATAAATGTTGGTTATGAGAGATAATTTTTTGAATTTATGCCAAATTTCAGTTATTATAATTAAGAGTAAATTTAGGCGAAAATGCCTGTAAAATCAACGTCTAGGCACTTGATAATTGTTTGTATAATGATAACCACTATCAAGCACTTATGACCTCACATGGAGATAAAGCTATGTCGCAAATGCTAACTGAATACAGAGCCCACGTCGCTGAGCGTGAAGCGCTAGGTGTGCCACCACAGCCATTGACCGACGCACAGACAGCAGATCTGGTAGAACTACTAAAAAACCCACCAGCTGGCGAAGAAGAATATTTGGTTGATCTATTAGAGAATCGCGTACCAGC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAACCTTCCCTGTTATAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 4 834774-842456 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011381.2 Moraxella bovoculi strain 58086 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 834774 32 100.0 33 ................................ ACGGCGGTATTTAACACCCTTAGAATATCCACA 834839 32 100.0 33 ................................ TGCCATTGCCTTGCCAGCTTCTTCGGCCGTGAT 834904 32 100.0 34 ................................ ATTTACCCTCCTACAATCTCATCAACTCTGGAAA 834970 32 100.0 34 ................................ TTAATCAAAAAATTATTTGCGGTTAAAAAAGATG 835036 32 100.0 34 ................................ ATCGTGTTCGATGCGGCACTGGTGTTTGACTTGT 835102 32 100.0 34 ................................ AAAACGACCGTCCTTAAACAATCGCCAGCCTTGC 835168 32 100.0 33 ................................ CGCTTGCCGTTGCATGACGACCTCCTAAAACGG 835233 32 100.0 33 ................................ TCATCGTTGATCCAAATCCAATGACCGATGAGA 835298 32 100.0 34 ................................ TTCTGCTGTAGTGATAGTGATACTCAAGTTAGAA 835364 32 100.0 33 ................................ ATCAAGTGCGCCGTGATAGTCATACCCCAAGAA 835429 32 100.0 34 ................................ AGCGGTAGGCTTGATATGGTTTGGCTTCGCAGTC 835495 32 100.0 35 ................................ TATCACTCGGCTGTCAGGCAGATAATAGCGCCCAT 835562 32 100.0 34 ................................ AGCTCATCGACTGTAGTAATGTTAAGCACAATCG 835628 32 100.0 33 ................................ AATCATGCCGTACATGATGGTTTTGATTTTGCC 835693 32 100.0 34 ................................ AATCGATGCAATGCACCGCTGATAATCACTGGGT 835759 32 100.0 34 ................................ AACTTGCCCAATCTTAGCATTAGCCTGTCTGTCA 835825 32 100.0 36 ................................ AAAATAGACGTGTGAAGAAAGAAGTAGAGAATGCGA 835893 32 100.0 35 ................................ TATCCCTAATAGGGTGATAAAATGCGATTTTTTAA 835960 32 100.0 34 ................................ TTTCACGATGATAGGAGCTAGACGATGATCCAGA 836026 32 100.0 34 ................................ CATGACACACGCCACGAAGCCATCAGCCGATTTG 836092 32 100.0 33 ................................ TCCTTCGGGATTTGTAAAAACTTGATAGCTATT 836157 32 100.0 34 ................................ ATGACACACGCCACGAAGCCATCAGCCGATTTGT 836223 32 100.0 34 ................................ ATTTTTAAGCACCACGCCATAATCGCCAAACACC 836289 32 100.0 33 ................................ AGCTTCGGTGATGACAGTAGAGCCGACAAATTT 836354 32 100.0 34 ................................ TTCCCCTAAGCCTTGGATTTTCTCCGTGGCTTTT 836420 32 100.0 35 ................................ GCCACACCGTCCAAAACTTATCCGAACCCATGAAA 836487 32 100.0 34 ................................ ATCTGTGTATCGCTCATTATGACTGCGAATAACC 836553 32 100.0 35 ................................ AAGGCATTATCTGCGTTGATGTGTGTATTATGCAA 836620 32 100.0 35 ................................ ATCATGCTTTTCTTTGCCGACTTCCACAAGCTCCA 836687 32 100.0 34 ................................ TAGCACTAGGCAAACTGGCGGTGCGTGGTCGGAC 836753 32 100.0 34 ................................ TGGTGAATTTTCTTTTGAGATGCAGTCTGATGAA 836819 32 100.0 34 ................................ CCCTACAATGTTAATCAAGCAAACTTAATCAAAG 836885 32 100.0 34 ................................ CACAGATATGGCTTGGACGCTGATGTCTGTTGTA 836951 32 100.0 34 ................................ CCAAGTGACGTTTTCAAAGTTTGGCTGTCCGTTG 837017 32 100.0 33 ................................ ATGGTGCTAGAAGCTGGCATGACGGTCGCCACC 837082 32 100.0 34 ................................ ATCAATCCCAAGTACTCGCCACTGATTAACCGTT 837148 32 100.0 34 ................................ CACAGATATGGCTTGGACGCTGATGTCTGTTGTA 837214 32 100.0 34 ................................ CCAAGTGACGTTTTCAAAGTTTGGCTGTCCGTTG 837280 32 100.0 33 ................................ ATGGTGCTAGAAGCTGGCATGACGGTCGCCACC 837345 32 100.0 34 ................................ ATCAATCCCAAGTACTCGCCACTGATTAACCGTT 837411 32 100.0 34 ................................ CACAGATATGGCTTGGACGCTGATGTCTGTTGTA 837477 32 100.0 34 ................................ AGCCAAGCTGGTTCGGTTGCCCTTGCCTTTGGAT 837543 32 100.0 35 ................................ AAAGTTATCTCTTGCCGATTGCATTAAAAATTTAT 837610 32 100.0 34 ................................ ATGCGCTGACCGCCATGGATGTCGCGGCGGTGAC 837676 32 100.0 34 ................................ ATTTTTAAGCGCCACGCCATAATCGCCAAACACC 837742 32 100.0 34 ................................ AATTGTTACGCTGTTCATGCTTATCCCATTCTTG 837808 32 100.0 34 ................................ TTTTGATATTAAAGGTTTGCCGTTAGCATCATGC 837874 32 100.0 34 ................................ TAGCATCCGTTCGGCATCTCGCACCATCTGATGG 837940 32 100.0 34 ................................ ATCATACAGCTTATCCTTATCCCATTCGCCAAGC 838006 32 100.0 34 ................................ ACATCGCGGTGGCGCACAAGGTTGGCAATCGCCT 838072 32 100.0 34 ................................ ATAATCAGGGTGTTTTGAATTAACTGGCATAATG 838138 32 96.9 35 ................A............... ACATCGCGGTGGCGCACAAGGTTGGCAATCGCCTT 838205 32 100.0 33 ................................ CTATTCAATGATACACCCCTTGCCACTGATTGC 838270 32 100.0 34 ................................ ATCGGTTTTGCATTCGGCTAAGGATTTGGGTGTA 838336 32 100.0 34 ................................ CTTTGCTTTTGTGTACAATCGCTCTACTTAAAGC 838402 32 100.0 36 ................................ TTCGTCTATCTGGACAAACGAACTGGCGAGCAGGTG 838470 32 100.0 34 ................................ ATCGCCATCTCTCAATGGTTCTGACTCAGGCTTT 838536 32 100.0 34 ................................ TCGGACATGCTGACTAATTGCAGCTGACAAATCC 838602 32 100.0 33 ................................ AATGCCAAAAAAATCTTTAAGCTCTTTTGTTCG 838667 32 100.0 33 ................................ TAGCGGTCTTGCTTTACTCGCCAAACGCAAAAA 838732 32 100.0 35 ................................ TCCTTTGCGTAATACCACGCCTGCTGTTCGGCTGT 838799 32 100.0 34 ................................ ATCGGTGAATAATGTCGGTCTGCCCCTTGTGGGC 838865 32 100.0 33 ................................ ATAAGTAAATTTAAAGCCTTCGGGCGTTGTTGT 838930 32 100.0 34 ................................ TATCTCTTCAGCTTGCTCACGCCAACCCGCCTGC 838996 32 100.0 34 ................................ ATCTCTCAATCCCCCATCATATATTTTTCAATAT 839062 32 100.0 34 ................................ ATCTGCTTGCCGTTTGCTACCGCATTTGCCACAT 839128 32 100.0 34 ................................ GTTCTCGGTCGCAACAGCCACCGACAGAGCCTGA 839194 32 100.0 34 ................................ ATGGCTTGGATGGTGTCCCTAAGCTCGGTAATGG 839260 32 100.0 34 ................................ CATACGTCCATGATTGATGCAATCGTGGGCTTTT 839326 32 100.0 34 ................................ TGTTGCACATGCCAATACACCAAAAAACCTTTCT 839392 32 100.0 34 ................................ AATATCCATTTTGGTTTTTTGATTTTGCGCCCTG 839458 32 100.0 33 ................................ ATGGTGCTAGAAGCTGGCATGACGGTCGCCACC 839523 32 100.0 34 ................................ ATCAATCCCAAGTACTCGCCACTGATTAACCGTT 839589 32 100.0 34 ................................ CACAGATATGGCTTGGACGCTGATGTCTGTTGTA 839655 32 100.0 34 ................................ AGCCAAGCTGGTTCGGTTGCCCTTGCCTTTGGAT 839721 32 100.0 35 ................................ AAAGTTATCTCTTGCCGATTGCATTAAAAATTTAT 839788 32 100.0 34 ................................ ATGCGCTGACCGCCATGGATGTCGCGGCGGTGAC 839854 32 100.0 34 ................................ ATTTTTAAGCGCCACGCCATAATCGCCAAACACC 839920 32 100.0 34 ................................ AATTGTTACGCTGTTCATGCTTATCCCATTCTTG 839986 32 100.0 34 ................................ TTTTGATATTAAAGGTTTGCCGTTAGCATCATGC 840052 32 100.0 34 ................................ TAGCATCCGTTCGGCATCTCGCACCATCTGATGG 840118 32 100.0 34 ................................ ATCATACAGCTTATCCTTATCCCATTCGCCAAGC 840184 32 100.0 34 ................................ ACATCGCGGTGGCGCACAAGGTTGGCAATCGCCT 840250 32 100.0 34 ................................ ATAATCAGGGTGTTTTGAATTAACTGGCATAATG 840316 32 96.9 35 ................A............... ACATCGCGGTGGCGCACAAGGTTGGCAATCGCCTT 840383 32 100.0 34 ................................ ATCGGTTTTGCATTCGGCTAAGGATTTGGGTGTA 840449 32 100.0 34 ................................ CTTTGCTTTTGTGTACAATCGCTCTACTTAAAGC 840515 32 100.0 36 ................................ TTCGTCTATCTGGACAAACGAACTGGCGAGCAGGTG 840583 32 100.0 34 ................................ ATCGCCATCTCTCAATGGTTCTGACTCAGGCTTT 840649 32 100.0 34 ................................ TCGGACATGCTGACTAATTGCAGCTGACAAATCC 840715 32 100.0 33 ................................ AATGCCAAAAAAATCTTTAAGCTCTTTTGTTCG 840780 32 100.0 33 ................................ TAGCGGTCTTGCTTTACTCGCCAAACGCAAAAA 840845 32 100.0 35 ................................ TCCTTTGCGTAATACCACGCCTGCTGTTCGGCTGT 840912 32 100.0 34 ................................ ATCGGTGAATAATGTCGGTCTGCCCCTTGTGGGC 840978 32 100.0 33 ................................ ATAAGTAAATTTAAAGCCTTCGGGCGTTGTTGT 841043 32 100.0 34 ................................ TATCTCTTCAGCTTGCTCACGCCAACCCGCCTGC 841109 32 100.0 34 ................................ ATCTCTCAATCCCCCATCATATATTTTTCAATAT 841175 32 100.0 34 ................................ ATCTGCTTGCCGTTTGCTACCGCATTTGCCACAT 841241 32 100.0 34 ................................ GTTCTCGGTCGCAACAGCCACCGACAGAGCCTGA 841307 32 100.0 34 ................................ ATGGCTTGGATGGTGTCCCTAAGCTCGGTAATGG 841373 32 100.0 34 ................................ CATACGTCCATGATTGATGCAATCGTGGGCTTTT 841439 32 100.0 34 ................................ TGTTGCACATGCCAATACACCAAAAAACCTTTCT 841505 32 100.0 34 ................................ AATATCCATTTTGGTTTTTTGATTTTGCGCCCTG 841571 32 100.0 34 ................................ TAGCTCCACTCTTTTTGTCAAAAATTGGCAAAAT 841637 32 100.0 33 ................................ ACCGTTAGCACAGCCATTTCAAAAATGGATGCT 841702 32 100.0 33 ................................ GAGCGCGCCATGTTCGCGGATCTGGATCGCGAC 841767 32 100.0 33 ................................ AACTTATGGCCGGCCTCTAAAAATGCATTGTCC 841832 32 100.0 34 ................................ TGTCAATGACTGCCACGCTCTTTGCTACTGCTTG 841898 32 100.0 34 ................................ TATCAAAATAACAACGAAAAAATGCAGGAAATCG 841964 32 100.0 33 ................................ GACGTTGAGAATCGCGAGTACGGAAGCAGAATA 842029 32 100.0 34 ................................ CCACGCTTGTTTTTCGGTGGTTGCGCCTGAGTAC 842095 32 100.0 35 ................................ CTAAAATCTGGAGACCGCAAAAAATGAAAACCTTT 842162 32 100.0 34 ................................ GTAACCAGCCACAACCAAGTCATTGGCTTTAACA 842228 32 100.0 34 ................................ ATACCACATCCCCACGGGGTTCTTTTGCGCCCAG 842294 32 100.0 33 ................................ TTTGGTGTTAATAACAATCTTAGCGCCATTTGG 842359 32 96.9 34 ..........................C..... TGTTGCTAGCATGCAAATCAACAATGGCAAAAAG 842425 32 87.5 0 ............................TGCA | ========== ====== ====== ====== ================================ ==================================== ================== 117 32 99.8 34 ATCGCACCCCATACGGGTGCGTGTGTTGAAAC # Left flank : GATGATGAGATATGTTAATGTTAATCAGTTATGATGTGGCGATGGACGATGGCGGACAAAAACGCCTAAGGCATATCGCCAAACATTGCCAAGATTATGGCGTGCGAGTGCAGTACTCGGTGTTTGAGTGCGACATCATGCCCGACCAGTGGGTGGTATTAAAAGACAAGCTATTAAAGGCGTACGACCCTGACAAGGACAGTTTGCGGTTTTATCATTTGGGCAGTAAATGGCGTGGCAAAGTGGAACATCATGGGGCAAAAAAGAGTGTGGATTTGTTTCAAGATACGCTGATATTGTGATGAAAAAGAGGTAAATCATGGCTCGCTAACGGGCAGTTCTCATCAAAATACAGGCAGGTTAGCGATGAGCTAAGTTTTTGAATTATTTAACAATTGAAAAGAAAGATAAGTACATTTATAATAAATGGCCTTTTTAAGGCTTAGGTTAGCGATTTTACCCAGTCTAAGCCTTAAAGATATAGCCTTTAAACAAAGGCT # Right flank : AAAATCCATACCTTCTTGACCACCTATTCCAGCCCCAAATGGACAAAGATTCCAATTTAAAATGACCAGTCATTCCGATAAATGCTGGTCATTTAATTTTTTATATGATTGTTATTTGGATAAATCTAATTGATCATATAAGTCAATTTTTTCCGCATGGATTCCCCTGTTAATGTAATAGGATATGATCGGTGAATAATGCGATCTAATATAGCGTCAGCAATGGTCGCCTCAGAAAATAAATCATGCCAATTTGCAACAGGATACTGGCTAGTTATCAGCAGACCTCCAACACTAGATTGCTCGTCAATAATGTCCAGTAACACAGGGCATATCTGTGGTAGCAATTCACCTATGCCAAAGTCATCAATGATTAACAAATCCACCTTGCAATATTTTTGCTTAACCTTGGCAATACTACCATCAGCGATTGACAAAATGATATCTTCATACAAATCAGCAGCTTGAACAAACATCACTTTTCTTAAATTTCGGCAAGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCCCATACGGGTGCGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //